EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000003046 (Gene tree)
Gene ID: -
Gene Symbol: fancm
Alias: -
Full Name: FA complementation group M
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 49451 bases
Position: chrGL173270.1:4397-53847
Accession: XB-GENE-994655
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000006628	ResIII	PF04851.15	2.3e-19	1	1
ENSXETP00000006628	DEAD	PF00270.29	6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000006628	-	1368	-	ENSXETP00000006628	456 (aa)	-	K9J7P1

Gene Model

Click here to download ENSXETG00000003046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000003046's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000003046	fancm	100	68.710	ENSG00000187790	FANCM	70	68.590	Homo_sapiens
ENSXETG00000003046	fancm	73	57.002	ENSAPOG00000014274	-	64	72.662	Acanthochromis_polyacanthus
ENSXETG00000003046	fancm	99	64.270	ENSACIG00000005444	-	67	64.270	Amphilophus_citrinellus
ENSXETG00000003046	fancm	60	68.132	ENSAOCG00000005964	-	99	68.132	Amphiprion_ocellaris
ENSXETG00000003046	fancm	60	68.498	ENSAPEG00000018344	-	99	68.498	Amphiprion_percula
ENSXETG00000003046	fancm	100	68.143	ENSBTAG00000002612	FANCM	95	68.156	Bos_taurus
ENSXETG00000003046	fancm	100	68.376	ENSCAFG00020022069	-	69	67.164	Canis_lupus_dingo
ENSXETG00000003046	fancm	85	73.779	ENSTSYG00000036497	-	58	73.779	Carlito_syrichta
ENSXETG00000003046	fancm	60	58.242	ENSCING00000002994	-	100	58.242	Ciona_intestinalis
ENSXETG00000003046	fancm	66	65.333	ENSDARG00000112136	CABZ01079748.1	97	65.436	Danio_rerio
ENSXETG00000003046	fancm	64	55.864	ENSEBUG00000014849	-	61	69.658	Eptatretus_burgeri
ENSXETG00000003046	fancm	100	69.214	ENSEASG00005007781	FANCM	69	69.214	Equus_asinus_asinus
ENSXETG00000003046	fancm	100	68.577	ENSFCAG00000022146	-	69	68.365	Felis_catus
ENSXETG00000003046	fancm	80	69.022	ENSFHEG00000006371	-	60	75.536	Fundulus_heteroclitus
ENSXETG00000003046	fancm	60	69.455	ENSGAFG00000002104	-	99	69.455	Gambusia_affinis
ENSXETG00000003046	fancm	55	73.092	ENSGAGG00000007068	-	92	57.865	Gopherus_agassizii
ENSXETG00000003046	fancm	99	61.184	ENSHCOG00000013769	-	67	61.184	Hippocampus_comes
ENSXETG00000003046	fancm	99	56.615	ENSIPUG00000014629	fancm	67	67.658	Ictalurus_punctatus
ENSXETG00000003046	fancm	74	55.690	ENSKMAG00000009391	-	66	71.739	Kryptolebias_marmoratus
ENSXETG00000003046	fancm	61	74.275	ENSMALG00000013187	-	64	74.275	Monopterus_albus
ENSXETG00000003046	fancm	100	68.860	ENSMUSG00000055884	Fancm	68	68.860	Mus_musculus
ENSXETG00000003046	fancm	59	68.401	ENSNBRG00000024095	-	99	68.401	Neolamprologus_brichardi
ENSXETG00000003046	fancm	100	68.790	ENSPPRG00000011952	-	70	68.577	Panthera_pardus
ENSXETG00000003046	fancm	100	69.002	ENSPTIG00000018621	-	70	68.790	Panthera_tigris_altaica
ENSXETG00000003046	fancm	74	60.652	ENSPKIG00000000861	-	92	59.148	Paramormyrops_kingsleyae
ENSXETG00000003046	fancm	59	68.148	ENSPMGG00000010830	-	99	68.148	Periophthalmus_magnuspinnatus
ENSXETG00000003046	fancm	53	56.250	ENSPMAG00000003340	-	100	52.941	Petromyzon_marinus
ENSXETG00000003046	fancm	100	66.453	ENSPCIG00000005354	-	70	66.595	Phascolarctos_cinereus
ENSXETG00000003046	fancm	59	68.401	ENSPNYG00000018775	-	99	68.401	Pundamilia_nyererei
ENSXETG00000003046	fancm	59	70.522	ENSSFOG00015017948	-	99	70.522	Scleropages_formosus
ENSXETG00000003046	fancm	90	64.237	ENSSMAG00000019903	-	65	74.627	Scophthalmus_maximus
ENSXETG00000003046	fancm	99	62.971	ENSSDUG00000016682	-	93	67.552	Seriola_dumerili
ENSXETG00000003046	fancm	65	69.024	ENSSPAG00000016930	-	90	69.024	Stegastes_partitus
ENSXETG00000003046	fancm	86	72.843	ENSTGUG00000013226	-	54	72.843	Taeniopygia_guttata
ENSXETG00000003046	fancm	98	65.188	ENSTRUG00000009756	-	65	65.188	Takifugu_rubripes
ENSXETG00000003046	fancm	100	68.577	ENSUMAG00000007704	-	67	68.153	Ursus_maritimus
ENSXETG00000003046	fancm	65	65.000	ENSXCOG00000004854	-	88	64.667	Xiphophorus_couchianus