EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000003155 (Gene tree)
Gene ID: -
Gene Symbol: thoc1
Alias: -
Full Name: THO complex 1 protein
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 20374 bases
Position: chrGL172720.1:1915863-1936236
Accession: XB-GENE-951669
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000006858	efThoc1	PF11957.8	8.8e-135	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000006858	-	2274	XM_002934124	ENSXETP00000006858	675 (aa)	XP_002934170	F6XN58

Gene Model

Click here to download ENSXETG00000003155's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000003155's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000003155	thoc1	98	78.939	ENSG00000079134	THOC1	99	84.043	Homo_sapiens
ENSXETG00000003155	thoc1	98	79.394	ENSAMEG00000006645	THOC1	99	79.394	Ailuropoda_melanoleuca
ENSXETG00000003155	thoc1	91	71.521	ENSACIG00000019392	thoc1	94	71.521	Amphilophus_citrinellus
ENSXETG00000003155	thoc1	97	68.293	ENSAOCG00000008391	thoc1	99	68.293	Amphiprion_ocellaris
ENSXETG00000003155	thoc1	97	70.821	ENSAPEG00000001093	thoc1	99	70.821	Amphiprion_percula
ENSXETG00000003155	thoc1	97	70.624	ENSATEG00000004783	thoc1	99	70.624	Anabas_testudineus
ENSXETG00000003155	thoc1	98	78.916	ENSAPLG00000016149	THOC1	99	78.916	Anas_platyrhynchos
ENSXETG00000003155	thoc1	99	80.119	ENSACAG00000008307	THOC1	99	79.822	Anolis_carolinensis
ENSXETG00000003155	thoc1	98	78.261	ENSANAG00000033200	THOC1	99	78.261	Aotus_nancymaae
ENSXETG00000003155	thoc1	97	71.125	ENSACLG00000016836	thoc1	99	71.125	Astatotilapia_calliptera
ENSXETG00000003155	thoc1	91	69.010	ENSAMXG00000014708	thoc1	97	69.010	Astyanax_mexicanus
ENSXETG00000003155	thoc1	98	79.091	ENSBTAG00000019215	THOC1	99	79.091	Bos_taurus
ENSXETG00000003155	thoc1	83	32.247	WBGene00020172	thoc-1	68	35.205	Caenorhabditis_elegans
ENSXETG00000003155	thoc1	98	79.091	ENSCJAG00000020450	THOC1	99	79.091	Callithrix_jacchus
ENSXETG00000003155	thoc1	98	79.545	ENSCAFG00000018324	THOC1	99	79.545	Canis_familiaris
ENSXETG00000003155	thoc1	98	79.545	ENSCAFG00020017894	THOC1	99	79.545	Canis_lupus_dingo
ENSXETG00000003155	thoc1	98	79.091	ENSCHIG00000015399	THOC1	99	79.969	Capra_hircus
ENSXETG00000003155	thoc1	98	79.394	ENSTSYG00000010585	THOC1	99	79.394	Carlito_syrichta
ENSXETG00000003155	thoc1	95	60.278	ENSCAPG00000016270	THOC1	98	60.278	Cavia_aperea
ENSXETG00000003155	thoc1	98	78.333	ENSCPOG00000000959	THOC1	99	78.333	Cavia_porcellus
ENSXETG00000003155	thoc1	98	79.091	ENSCCAG00000025766	THOC1	99	79.091	Cebus_capucinus
ENSXETG00000003155	thoc1	98	76.061	ENSCATG00000028180	THOC1	99	83.473	Cercocebus_atys
ENSXETG00000003155	thoc1	95	79.814	ENSCLAG00000009117	THOC1	99	79.814	Chinchilla_lanigera
ENSXETG00000003155	thoc1	98	79.091	ENSCSAG00000017631	THOC1	99	79.091	Chlorocebus_sabaeus
ENSXETG00000003155	thoc1	78	83.197	ENSCHOG00000010609	THOC1	79	83.197	Choloepus_hoffmanni
ENSXETG00000003155	thoc1	98	81.846	ENSCPBG00000027558	THOC1	100	81.846	Chrysemys_picta_bellii
ENSXETG00000003155	thoc1	72	47.485	ENSCING00000007663	-	99	47.485	Ciona_intestinalis
ENSXETG00000003155	thoc1	91	46.530	ENSCSAVG00000010649	-	100	46.530	Ciona_savignyi
ENSXETG00000003155	thoc1	98	78.939	ENSCANG00000034265	THOC1	99	83.333	Colobus_angolensis_palliatus
ENSXETG00000003155	thoc1	98	78.636	ENSCGRG00001016464	Thoc1	99	78.636	Cricetulus_griseus_chok1gshd
ENSXETG00000003155	thoc1	88	64.322	ENSCGRG00000003390	-	99	64.322	Cricetulus_griseus_crigri
ENSXETG00000003155	thoc1	96	78.955	ENSCGRG00000010269	-	99	79.503	Cricetulus_griseus_crigri
ENSXETG00000003155	thoc1	97	70.287	ENSCSEG00000012486	thoc1	99	71.132	Cynoglossus_semilaevis
ENSXETG00000003155	thoc1	97	69.757	ENSCVAG00000020600	thoc1	99	69.757	Cyprinodon_variegatus
ENSXETG00000003155	thoc1	97	72.382	ENSDARG00000088246	thoc1	99	72.382	Danio_rerio
ENSXETG00000003155	thoc1	98	79.242	ENSDNOG00000019217	THOC1	99	79.242	Dasypus_novemcinctus
ENSXETG00000003155	thoc1	97	74.886	ENSDORG00000008060	Thoc1	99	75.894	Dipodomys_ordii
ENSXETG00000003155	thoc1	95	37.446	FBgn0037382	Hpr1	94	37.590	Drosophila_melanogaster
ENSXETG00000003155	thoc1	87	62.649	ENSETEG00000004165	THOC1	98	62.649	Echinops_telfairi
ENSXETG00000003155	thoc1	90	63.218	ENSEBUG00000005998	thoc1	98	64.532	Eptatretus_burgeri
ENSXETG00000003155	thoc1	99	78.254	ENSEASG00005002549	THOC1	95	79.666	Equus_asinus_asinus
ENSXETG00000003155	thoc1	98	79.697	ENSECAG00000009267	THOC1	89	79.697	Equus_caballus
ENSXETG00000003155	thoc1	78	65.714	ENSEEUG00000012214	-	82	65.714	Erinaceus_europaeus
ENSXETG00000003155	thoc1	96	70.061	ENSELUG00000023277	thoc1	99	70.061	Esox_lucius
ENSXETG00000003155	thoc1	98	79.545	ENSFCAG00000022454	THOC1	86	79.545	Felis_catus
ENSXETG00000003155	thoc1	95	80.989	ENSFALG00000006205	THOC1	100	80.989	Ficedula_albicollis
ENSXETG00000003155	thoc1	96	79.294	ENSFDAG00000006842	THOC1	99	79.294	Fukomys_damarensis
ENSXETG00000003155	thoc1	97	68.997	ENSFHEG00000008841	thoc1	99	68.997	Fundulus_heteroclitus
ENSXETG00000003155	thoc1	97	69.453	ENSGMOG00000011486	thoc1	99	69.453	Gadus_morhua
ENSXETG00000003155	thoc1	100	78.550	ENSGALG00000014915	THOC1	100	78.774	Gallus_gallus
ENSXETG00000003155	thoc1	97	70.517	ENSGAFG00000021464	thoc1	99	71.181	Gambusia_affinis
ENSXETG00000003155	thoc1	97	69.909	ENSGACG00000017361	thoc1	96	75.549	Gasterosteus_aculeatus
ENSXETG00000003155	thoc1	99	81.231	ENSGAGG00000021230	-	99	81.231	Gopherus_agassizii
ENSXETG00000003155	thoc1	98	78.939	ENSGGOG00000003013	THOC1	99	78.939	Gorilla_gorilla
ENSXETG00000003155	thoc1	97	71.277	ENSHBUG00000009096	thoc1	99	71.277	Haplochromis_burtoni
ENSXETG00000003155	thoc1	98	78.636	ENSHGLG00000003712	-	99	78.636	Heterocephalus_glaber_female
ENSXETG00000003155	thoc1	69	85.333	ENSHGLG00000009264	-	99	85.333	Heterocephalus_glaber_female
ENSXETG00000003155	thoc1	98	78.939	ENSHGLG00100003570	THOC1	99	78.939	Heterocephalus_glaber_male
ENSXETG00000003155	thoc1	67	82.667	ENSHGLG00100002225	-	99	82.667	Heterocephalus_glaber_male
ENSXETG00000003155	thoc1	86	72.045	ENSIPUG00000005306	thoc1	99	72.045	Ictalurus_punctatus
ENSXETG00000003155	thoc1	98	79.394	ENSSTOG00000006484	THOC1	99	79.394	Ictidomys_tridecemlineatus
ENSXETG00000003155	thoc1	51	82.164	ENSJJAG00000014893	-	96	82.164	Jaculus_jaculus
ENSXETG00000003155	thoc1	97	70.274	ENSKMAG00000003904	thoc1	99	70.274	Kryptolebias_marmoratus
ENSXETG00000003155	thoc1	97	69.637	ENSLBEG00000020372	thoc1	98	69.637	Labrus_bergylta
ENSXETG00000003155	thoc1	98	76.133	ENSLACG00000014869	THOC1	100	76.133	Latimeria_chalumnae
ENSXETG00000003155	thoc1	97	74.203	ENSLOCG00000002097	thoc1	99	73.900	Lepisosteus_oculatus
ENSXETG00000003155	thoc1	98	79.545	ENSLAFG00000009585	THOC1	99	79.545	Loxodonta_africana
ENSXETG00000003155	thoc1	98	79.091	ENSMFAG00000041520	THOC1	99	79.091	Macaca_fascicularis
ENSXETG00000003155	thoc1	98	79.091	ENSMMUG00000004662	THOC1	99	79.091	Macaca_mulatta
ENSXETG00000003155	thoc1	98	79.091	ENSMNEG00000040177	THOC1	99	79.091	Macaca_nemestrina
ENSXETG00000003155	thoc1	98	79.091	ENSMLEG00000034201	THOC1	99	79.091	Mandrillus_leucophaeus
ENSXETG00000003155	thoc1	92	70.223	ENSMAMG00000016747	thoc1	99	70.223	Mastacembelus_armatus
ENSXETG00000003155	thoc1	97	71.125	ENSMZEG00005024609	thoc1	99	71.125	Maylandia_zebra
ENSXETG00000003155	thoc1	95	80.465	ENSMGAG00000009811	THOC1	100	80.465	Meleagris_gallopavo
ENSXETG00000003155	thoc1	98	78.636	ENSMAUG00000010272	Thoc1	99	78.636	Mesocricetus_auratus
ENSXETG00000003155	thoc1	98	80.000	ENSMICG00000027200	THOC1	99	80.000	Microcebus_murinus
ENSXETG00000003155	thoc1	97	78.387	ENSMOCG00000014536	-	86	78.387	Microtus_ochrogaster
ENSXETG00000003155	thoc1	98	68.939	ENSMOCG00000014924	-	96	68.939	Microtus_ochrogaster
ENSXETG00000003155	thoc1	91	69.256	ENSMMOG00000011772	thoc1	100	69.256	Mola_mola
ENSXETG00000003155	thoc1	98	79.460	ENSMODG00000021482	THOC1	99	79.460	Monodelphis_domestica
ENSXETG00000003155	thoc1	97	69.711	ENSMALG00000021872	thoc1	99	69.711	Monopterus_albus
ENSXETG00000003155	thoc1	98	78.788	MGP_CAROLIEiJ_G0021989	Thoc1	99	78.788	Mus_caroli
ENSXETG00000003155	thoc1	98	78.939	ENSMUSG00000024287	Thoc1	99	82.857	Mus_musculus
ENSXETG00000003155	thoc1	98	78.939	MGP_PahariEiJ_G0018726	Thoc1	99	78.939	Mus_pahari
ENSXETG00000003155	thoc1	98	78.939	MGP_SPRETEiJ_G0022905	Thoc1	99	78.939	Mus_spretus
ENSXETG00000003155	thoc1	98	79.394	ENSMPUG00000005448	THOC1	99	79.394	Mustela_putorius_furo
ENSXETG00000003155	thoc1	88	72.120	ENSMLUG00000027965	-	99	72.000	Myotis_lucifugus
ENSXETG00000003155	thoc1	98	78.971	ENSMLUG00000004090	-	99	78.971	Myotis_lucifugus
ENSXETG00000003155	thoc1	59	71.930	ENSMLUG00000024912	-	100	71.930	Myotis_lucifugus
ENSXETG00000003155	thoc1	95	64.275	ENSNGAG00000008061	-	98	64.275	Nannospalax_galili
ENSXETG00000003155	thoc1	98	79.697	ENSNGAG00000001401	-	99	79.697	Nannospalax_galili
ENSXETG00000003155	thoc1	94	70.912	ENSNBRG00000005991	thoc1	96	70.912	Neolamprologus_brichardi
ENSXETG00000003155	thoc1	98	79.091	ENSNLEG00000006835	THOC1	99	79.091	Nomascus_leucogenys
ENSXETG00000003155	thoc1	95	69.565	ENSMEUG00000009756	THOC1	99	69.565	Notamacropus_eugenii
ENSXETG00000003155	thoc1	98	63.030	ENSOPRG00000001108	THOC1	99	63.030	Ochotona_princeps
ENSXETG00000003155	thoc1	98	73.485	ENSODEG00000006623	THOC1	99	73.485	Octodon_degus
ENSXETG00000003155	thoc1	97	71.125	ENSONIG00000009440	thoc1	99	70.953	Oreochromis_niloticus
ENSXETG00000003155	thoc1	98	79.242	ENSOCUG00000011601	THOC1	99	79.242	Oryctolagus_cuniculus
ENSXETG00000003155	thoc1	97	70.213	ENSORLG00000017629	thoc1	99	70.213	Oryzias_latipes
ENSXETG00000003155	thoc1	97	70.213	ENSORLG00020007567	thoc1	99	70.213	Oryzias_latipes_hni
ENSXETG00000003155	thoc1	97	70.365	ENSORLG00015007356	thoc1	99	70.365	Oryzias_latipes_hsok
ENSXETG00000003155	thoc1	97	69.102	ENSOMEG00000008200	thoc1	99	69.605	Oryzias_melastigma
ENSXETG00000003155	thoc1	98	76.667	ENSOGAG00000000470	THOC1	99	76.667	Otolemur_garnettii
ENSXETG00000003155	thoc1	96	79.416	ENSOARG00000009238	THOC1	98	79.416	Ovis_aries
ENSXETG00000003155	thoc1	98	79.091	ENSPPAG00000031812	THOC1	99	79.091	Pan_paniscus
ENSXETG00000003155	thoc1	98	79.242	ENSPPRG00000023794	THOC1	99	84.314	Panthera_pardus
ENSXETG00000003155	thoc1	98	79.242	ENSPTIG00000007469	THOC1	99	84.314	Panthera_tigris_altaica
ENSXETG00000003155	thoc1	98	78.111	ENSPTRG00000009816	THOC1	99	78.111	Pan_troglodytes
ENSXETG00000003155	thoc1	98	78.163	ENSPANG00000008665	THOC1	99	78.163	Papio_anubis
ENSXETG00000003155	thoc1	97	68.892	ENSPKIG00000005906	thoc1	99	71.212	Paramormyrops_kingsleyae
ENSXETG00000003155	thoc1	80	81.784	ENSPSIG00000007691	THOC1	98	81.784	Pelodiscus_sinensis
ENSXETG00000003155	thoc1	92	68.850	ENSPMGG00000008279	thoc1	95	68.850	Periophthalmus_magnuspinnatus
ENSXETG00000003155	thoc1	98	78.636	ENSPEMG00000021789	Thoc1	99	78.636	Peromyscus_maniculatus_bairdii
ENSXETG00000003155	thoc1	72	78.471	ENSPCIG00000026942	THOC1	98	78.471	Phascolarctos_cinereus
ENSXETG00000003155	thoc1	97	70.167	ENSPFOG00000011673	thoc1	99	70.167	Poecilia_formosa
ENSXETG00000003155	thoc1	97	70.365	ENSPLAG00000019648	thoc1	99	70.365	Poecilia_latipinna
ENSXETG00000003155	thoc1	97	70.320	ENSPMEG00000007083	thoc1	99	70.320	Poecilia_mexicana
ENSXETG00000003155	thoc1	97	70.213	ENSPREG00000006719	thoc1	99	70.213	Poecilia_reticulata
ENSXETG00000003155	thoc1	72	81.557	ENSPPYG00000009049	-	98	81.557	Pongo_abelii
ENSXETG00000003155	thoc1	98	70.606	ENSPCAG00000005320	THOC1	99	70.606	Procavia_capensis
ENSXETG00000003155	thoc1	98	79.242	ENSPCOG00000009234	THOC1	99	79.242	Propithecus_coquereli
ENSXETG00000003155	thoc1	98	78.333	ENSPVAG00000004007	THOC1	99	78.333	Pteropus_vampyrus
ENSXETG00000003155	thoc1	97	71.277	ENSPNYG00000019152	thoc1	99	71.277	Pundamilia_nyererei
ENSXETG00000003155	thoc1	97	71.385	ENSPNAG00000023390	thoc1	99	71.385	Pygocentrus_nattereri
ENSXETG00000003155	thoc1	80	63.878	ENSRNOG00000015332	Thoc1	96	63.878	Rattus_norvegicus
ENSXETG00000003155	thoc1	98	78.261	ENSRBIG00000033738	THOC1	99	81.142	Rhinopithecus_bieti
ENSXETG00000003155	thoc1	98	79.091	ENSRROG00000044988	THOC1	99	83.333	Rhinopithecus_roxellana
ENSXETG00000003155	thoc1	98	79.091	ENSSBOG00000016556	THOC1	99	79.091	Saimiri_boliviensis_boliviensis
ENSXETG00000003155	thoc1	98	79.848	ENSSHAG00000014829	THOC1	99	79.848	Sarcophilus_harrisii
ENSXETG00000003155	thoc1	97	72.492	ENSSFOG00015021527	thoc1	99	72.492	Scleropages_formosus
ENSXETG00000003155	thoc1	97	69.406	ENSSMAG00000018465	thoc1	99	69.406	Scophthalmus_maximus
ENSXETG00000003155	thoc1	97	70.624	ENSSDUG00000016810	thoc1	99	70.624	Seriola_dumerili
ENSXETG00000003155	thoc1	97	70.776	ENSSLDG00000015555	thoc1	99	70.776	Seriola_lalandi_dorsalis
ENSXETG00000003155	thoc1	86	80.769	ENSSARG00000006910	THOC1	87	80.769	Sorex_araneus
ENSXETG00000003155	thoc1	96	79.692	ENSSPUG00000007238	THOC1	99	79.300	Sphenodon_punctatus
ENSXETG00000003155	thoc1	97	67.727	ENSSPAG00000018847	thoc1	99	67.727	Stegastes_partitus
ENSXETG00000003155	thoc1	98	79.545	ENSSSCG00000025653	THOC1	94	79.545	Sus_scrofa
ENSXETG00000003155	thoc1	98	80.816	ENSTGUG00000010204	THOC1	100	80.816	Taeniopygia_guttata
ENSXETG00000003155	thoc1	97	69.605	ENSTRUG00000013518	thoc1	99	69.605	Takifugu_rubripes
ENSXETG00000003155	thoc1	97	68.788	ENSTNIG00000008473	thoc1	99	68.788	Tetraodon_nigroviridis
ENSXETG00000003155	thoc1	98	72.121	ENSTBEG00000016920	THOC1	99	72.121	Tupaia_belangeri
ENSXETG00000003155	thoc1	98	73.182	ENSTTRG00000016664	THOC1	99	73.182	Tursiops_truncatus
ENSXETG00000003155	thoc1	98	79.545	ENSUAMG00000002527	THOC1	99	80.495	Ursus_americanus
ENSXETG00000003155	thoc1	98	79.545	ENSUMAG00000019693	THOC1	99	79.545	Ursus_maritimus
ENSXETG00000003155	thoc1	66	72.772	ENSVPAG00000003726	-	67	72.772	Vicugna_pacos
ENSXETG00000003155	thoc1	98	79.545	ENSVVUG00000004384	THOC1	99	79.545	Vulpes_vulpes
ENSXETG00000003155	thoc1	91	69.530	ENSXCOG00000016085	thoc1	89	69.530	Xiphophorus_couchianus
ENSXETG00000003155	thoc1	97	70.365	ENSXMAG00000002353	thoc1	99	70.365	Xiphophorus_maculatus