EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXETG00000003166 (Gene tree)
Gene ID
-
Gene Symbol
cnot3
Alias
-
Full Name
Xenopus tropicalis CCR4-NOT transcription complex subunit 3 (cnot3)%2C mRNA.
Gene Type
protein_coding
Species
Xenopus_tropicalis
Status
putative
Strand
Plus strand
Length
44533 bases
Position
chrGL172992.1:147681-192213
Accession
NM_001127980
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXETP00000006886Not3PF04065.154.7e-9511
ENSXETP00000062322Not3PF04065.157e-9511
ENSXETP00000006886NOT2_3_5PF04153.184.7e-4111
ENSXETP00000062322NOT2_3_5PF04153.189.5e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXETT00000006886-3370XM_012966123ENSXETP00000006886727 (aa)XP_012821577B2GUB5
ENSXETT00000060736-3856-ENSXETP00000062322889 (aa)-F6TJ16
Gene Model
Click here to download ENSXETG00000003166's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000003166's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXETG00000003166cnot310076.903ENSG00000088038CNOT310097.436Homo_sapiens
ENSXETG00000003166cnot36781.429ENSAPOG00000015499CNOT38980.000Acanthochromis_polyacanthus
ENSXETG00000003166cnot35689.964ENSAPOG00000015002cnot3b7889.455Acanthochromis_polyacanthus
ENSXETG00000003166cnot310076.548ENSAMEG00000004528CNOT39197.078Ailuropoda_melanoleuca
ENSXETG00000003166cnot38888.350ENSACIG00000006635cnot3a8291.064Amphilophus_citrinellus
ENSXETG00000003166cnot36188.596ENSACIG00000003652cnot3b7686.842Amphilophus_citrinellus
ENSXETG00000003166cnot39472.887ENSAOCG00000018385-7676.984Amphiprion_ocellaris
ENSXETG00000003166cnot38789.320ENSAOCG00000023769cnot3a6987.220Amphiprion_ocellaris
ENSXETG00000003166cnot38989.320ENSAPEG00000006624cnot3a7087.220Amphiprion_percula
ENSXETG00000003166cnot39184.912ENSAPEG00000002640cnot3b7588.479Amphiprion_percula
ENSXETG00000003166cnot38889.320ENSATEG00000022737cnot3a7688.562Anabas_testudineus
ENSXETG00000003166cnot39790.939ENSATEG00000015777cnot3b7490.523Anabas_testudineus
ENSXETG00000003166cnot310086.538ENSACAG00000016085CNOT310089.796Anolis_carolinensis
ENSXETG00000003166cnot310078.261ENSANAG00000025756CNOT38697.403Aotus_nancymaae
ENSXETG00000003166cnot39791.586ENSACLG00000016702cnot3b7774.101Astatotilapia_calliptera
ENSXETG00000003166cnot38889.320ENSACLG00000021136cnot3a6987.220Astatotilapia_calliptera
ENSXETG00000003166cnot38688.350ENSAMXG00000012359cnot3a7487.908Astyanax_mexicanus
ENSXETG00000003166cnot38889.644ENSAMXG00000009447cnot3b10058.124Astyanax_mexicanus
ENSXETG00000003166cnot310077.025ENSBTAG00000014900CNOT39596.486Bos_taurus
ENSXETG00000003166cnot35350.000WBGene00003826ntl-39650.000Caenorhabditis_elegans
ENSXETG00000003166cnot310076.933ENSCJAG00000001094CNOT38697.403Callithrix_jacchus
ENSXETG00000003166cnot310077.428ENSCAFG00000002699CNOT39197.403Canis_familiaris
ENSXETG00000003166cnot310077.428ENSCAFG00020018359CNOT39197.403Canis_lupus_dingo
ENSXETG00000003166cnot39977.463ENSCHIG00000015302CNOT38993.770Capra_hircus
ENSXETG00000003166cnot310077.381ENSTSYG00000008058CNOT38797.403Carlito_syrichta
ENSXETG00000003166cnot310076.933ENSCAPG00000009533CNOT39296.486Cavia_aperea
ENSXETG00000003166cnot310078.113ENSCPOG00000020741CNOT38696.486Cavia_porcellus
ENSXETG00000003166cnot310078.445ENSCCAG00000036290CNOT38697.403Cebus_capucinus
ENSXETG00000003166cnot310077.105ENSCATG00000030324CNOT39497.403Cercocebus_atys
ENSXETG00000003166cnot310079.654ENSCLAG00000003302CNOT39196.486Chinchilla_lanigera
ENSXETG00000003166cnot310076.974ENSCSAG00000001900CNOT38697.403Chlorocebus_sabaeus
ENSXETG00000003166cnot310085.577ENSCPBG00000011655CNOT310089.766Chrysemys_picta_bellii
ENSXETG00000003166cnot310050.593ENSCING00000000293-7267.490Ciona_intestinalis
ENSXETG00000003166cnot310077.105ENSCANG00000013408CNOT39596.166Colobus_angolensis_palliatus
ENSXETG00000003166cnot310077.924ENSCGRG00001000855Cnot38997.727Cricetulus_griseus_chok1gshd
ENSXETG00000003166cnot36173.611ENSCGRG00000012929Cnot37072.685Cricetulus_griseus_crigri
ENSXETG00000003166cnot38888.065ENSCSEG00000003574cnot3a6986.262Cynoglossus_semilaevis
ENSXETG00000003166cnot310061.273ENSCSEG00000016892cnot3b6483.922Cynoglossus_semilaevis
ENSXETG00000003166cnot37589.320ENSCVAG00000022122cnot3b7688.889Cyprinodon_variegatus
ENSXETG00000003166cnot38987.419ENSCVAG00000008168cnot3a7085.759Cyprinodon_variegatus
ENSXETG00000003166cnot38987.702ENSDARG00000007135cnot3a7587.908Danio_rerio
ENSXETG00000003166cnot39887.138ENSDARG00000019842cnot3b8085.897Danio_rerio
ENSXETG00000003166cnot310076.378ENSDNOG00000045972CNOT39197.078Dasypus_novemcinctus
ENSXETG00000003166cnot310077.792ENSDORG00000008021Cnot38997.403Dipodomys_ordii
ENSXETG00000003166cnot36462.304FBgn0033029Not35363.137Drosophila_melanogaster
ENSXETG00000003166cnot373100.000ENSETEG00000006305CNOT362100.000Echinops_telfairi
ENSXETG00000003166cnot310056.113ENSEBUG00000010437cnot3a10053.000Eptatretus_burgeri
ENSXETG00000003166cnot310076.278ENSEASG00005021591CNOT38797.403Equus_asinus_asinus
ENSXETG00000003166cnot310076.278ENSECAG00000023181CNOT38797.403Equus_caballus
ENSXETG00000003166cnot39288.065ENSELUG00000000953cnot3b7786.971Esox_lucius
ENSXETG00000003166cnot38980.299ENSELUG00000014743cnot3a7779.758Esox_lucius
ENSXETG00000003166cnot310077.219ENSFCAG00000014042CNOT39196.486Felis_catus
ENSXETG00000003166cnot38888.997ENSFHEG00000001696cnot3b6972.794Fundulus_heteroclitus
ENSXETG00000003166cnot38887.097ENSFHEG00000023166cnot3a8281.319Fundulus_heteroclitus
ENSXETG00000003166cnot38182.372ENSGMOG00000005365cnot3a6981.818Gadus_morhua
ENSXETG00000003166cnot37587.702ENSGAFG00000003459cnot3b10059.227Gambusia_affinis
ENSXETG00000003166cnot38888.387ENSGAFG00000013094cnot3a7085.759Gambusia_affinis
ENSXETG00000003166cnot38082.315ENSGACG00000011489cnot3a6781.270Gasterosteus_aculeatus
ENSXETG00000003166cnot36081.890ENSGACG00000009395cnot3b6381.890Gasterosteus_aculeatus
ENSXETG00000003166cnot39983.379ENSGAGG00000012677CNOT310087.451Gopherus_agassizii
ENSXETG00000003166cnot310078.689ENSGGOG00000012996CNOT38697.403Gorilla_gorilla
ENSXETG00000003166cnot39970.710ENSHBUG00000019699cnot3b6781.019Haplochromis_burtoni
ENSXETG00000003166cnot38889.320ENSHBUG00000005275cnot3a6987.220Haplochromis_burtoni
ENSXETG00000003166cnot310076.517ENSHGLG00000008821CNOT39096.486Heterocephalus_glaber_female
ENSXETG00000003166cnot36386.260ENSHGLG00100006181CNOT310081.609Heterocephalus_glaber_male
ENSXETG00000003166cnot39588.350ENSHCOG00000020968cnot3a7686.262Hippocampus_comes
ENSXETG00000003166cnot39989.161ENSIPUG00000009046cnot3b6988.070Ictalurus_punctatus
ENSXETG00000003166cnot39879.153ENSIPUG00000000167cnot310055.714Ictalurus_punctatus
ENSXETG00000003166cnot310077.559ENSSTOG00000028248CNOT38997.403Ictidomys_tridecemlineatus
ENSXETG00000003166cnot310078.129ENSJJAG00000014594Cnot38997.727Jaculus_jaculus
ENSXETG00000003166cnot38890.939ENSKMAG00000018723cnot3b7690.523Kryptolebias_marmoratus
ENSXETG00000003166cnot38989.032ENSKMAG00000004863cnot3a9885.824Kryptolebias_marmoratus
ENSXETG00000003166cnot38789.355ENSLBEG00000018278cnot3b7589.542Labrus_bergylta
ENSXETG00000003166cnot35388.235ENSLBEG00000017296cnot3a6587.843Labrus_bergylta
ENSXETG00000003166cnot310079.973ENSLACG00000009742CNOT38894.463Latimeria_chalumnae
ENSXETG00000003166cnot36592.581ENSLOCG00000000005cnot3b7992.484Lepisosteus_oculatus
ENSXETG00000003166cnot310072.302ENSLAFG00000022133CNOT39196.440Loxodonta_africana
ENSXETG00000003166cnot310077.237ENSMFAG00000040073CNOT38697.403Macaca_fascicularis
ENSXETG00000003166cnot310069.342ENSMMUG00000009698CNOT310099.020Macaca_mulatta
ENSXETG00000003166cnot310076.711ENSMNEG00000036750CNOT38697.403Macaca_nemestrina
ENSXETG00000003166cnot310072.382ENSMLEG00000036579CNOT38697.403Mandrillus_leucophaeus
ENSXETG00000003166cnot38890.615ENSMAMG00000019357cnot3b7890.196Mastacembelus_armatus
ENSXETG00000003166cnot38989.644ENSMAMG00000019397cnot3a6887.540Mastacembelus_armatus
ENSXETG00000003166cnot39791.586ENSMZEG00005002466cnot3b7774.038Maylandia_zebra
ENSXETG00000003166cnot38889.320ENSMZEG00005016304cnot3a6987.220Maylandia_zebra
ENSXETG00000003166cnot310078.421ENSMAUG00000014996Cnot38997.727Mesocricetus_auratus
ENSXETG00000003166cnot310076.409ENSMICG00000002370CNOT38595.752Microcebus_murinus
ENSXETG00000003166cnot371100.000ENSMOCG00000013249Cnot387100.000Microtus_ochrogaster
ENSXETG00000003166cnot36387.552ENSMMOG00000013086cnot3b7385.892Mola_mola
ENSXETG00000003166cnot38884.466ENSMMOG00000016446cnot3a6386.809Mola_mola
ENSXETG00000003166cnot310075.889ENSMODG00000004066CNOT310076.548Monodelphis_domestica
ENSXETG00000003166cnot39964.987ENSMALG00000004936cnot3b7386.957Monopterus_albus
ENSXETG00000003166cnot38888.065ENSMALG00000009204cnot3a7086.262Monopterus_albus
ENSXETG00000003166cnot310077.822MGP_CAROLIEiJ_G0029095Cnot3100100.000Mus_caroli
ENSXETG00000003166cnot310077.632ENSMUSG00000035632Cnot3100100.000Mus_musculus
ENSXETG00000003166cnot310078.215MGP_PahariEiJ_G0020964Cnot3100100.000Mus_pahari
ENSXETG00000003166cnot310077.632MGP_SPRETEiJ_G0030148Cnot3100100.000Mus_spretus
ENSXETG00000003166cnot310075.953ENSMPUG00000010352CNOT39396.486Mustela_putorius_furo
ENSXETG00000003166cnot310078.084ENSNGAG00000013266Cnot38697.403Nannospalax_galili
ENSXETG00000003166cnot38687.225ENSNBRG00000003336cnot3b9685.463Neolamprologus_brichardi
ENSXETG00000003166cnot38189.804ENSNBRG00000002401cnot3a7088.235Neolamprologus_brichardi
ENSXETG00000003166cnot310072.786ENSNLEG00000006272CNOT38597.403Nomascus_leucogenys
ENSXETG00000003166cnot377100.000ENSMEUG00000002952CNOT378100.000Notamacropus_eugenii
ENSXETG00000003166cnot362100.000ENSOPRG00000001605-62100.000Ochotona_princeps
ENSXETG00000003166cnot310078.656ENSODEG00000000705CNOT310089.873Octodon_degus
ENSXETG00000003166cnot38889.320ENSONIG00000006568cnot3a7287.220Oreochromis_niloticus
ENSXETG00000003166cnot38891.262ENSONIG00000007047cnot3b7872.447Oreochromis_niloticus
ENSXETG00000003166cnot310077.939ENSOCUG00000007691CNOT38797.403Oryctolagus_cuniculus
ENSXETG00000003166cnot37590.615ENSORLG00000005982cnot3b8190.196Oryzias_latipes
ENSXETG00000003166cnot39588.710ENSORLG00000011174cnot3a7086.901Oryzias_latipes
ENSXETG00000003166cnot39790.615ENSORLG00020005779cnot3b10056.734Oryzias_latipes_hni
ENSXETG00000003166cnot39588.387ENSORLG00020008009cnot3a7086.581Oryzias_latipes_hni
ENSXETG00000003166cnot37590.615ENSORLG00015019021cnot3b10057.460Oryzias_latipes_hsok
ENSXETG00000003166cnot39588.387ENSORLG00015013729cnot3a7086.581Oryzias_latipes_hsok
ENSXETG00000003166cnot38888.710ENSOMEG00000010309cnot3a10063.588Oryzias_melastigma
ENSXETG00000003166cnot39789.968ENSOMEG00000015557cnot3b6988.141Oryzias_melastigma
ENSXETG00000003166cnot310076.903ENSOGAG00000006945CNOT39095.752Otolemur_garnettii
ENSXETG00000003166cnot38865.549ENSOARG00000002981CNOT36884.286Ovis_aries
ENSXETG00000003166cnot310078.689ENSPPAG00000002748CNOT38697.403Pan_paniscus
ENSXETG00000003166cnot310077.219ENSPPRG00000011705CNOT39196.486Panthera_pardus
ENSXETG00000003166cnot38495.050ENSPTIG00000008781CNOT39594.719Panthera_tigris_altaica
ENSXETG00000003166cnot310078.689ENSPTRG00000011444CNOT38697.403Pan_troglodytes
ENSXETG00000003166cnot310078.689ENSPTRG00000046717-8697.403Pan_troglodytes
ENSXETG00000003166cnot310077.105ENSPANG00000009375CNOT38697.403Papio_anubis
ENSXETG00000003166cnot36994.468ENSPKIG00000015967-8092.766Paramormyrops_kingsleyae
ENSXETG00000003166cnot38990.291ENSPKIG00000011733CNOT37391.373Paramormyrops_kingsleyae
ENSXETG00000003166cnot36888.550ENSPMGG00000022539cnot3b6874.922Periophthalmus_magnuspinnatus
ENSXETG00000003166cnot310078.113ENSPEMG00000024185Cnot38997.727Peromyscus_maniculatus_bairdii
ENSXETG00000003166cnot310080.796ENSPCIG00000023018CNOT39396.809Phascolarctos_cinereus
ENSXETG00000003166cnot38888.350ENSPFOG00000007168cnot3b10058.969Poecilia_formosa
ENSXETG00000003166cnot39788.387ENSPFOG00000008693cnot3a9187.500Poecilia_formosa
ENSXETG00000003166cnot39788.387ENSPLAG00000013324cnot3a7085.759Poecilia_latipinna
ENSXETG00000003166cnot38888.350ENSPLAG00000013457cnot3b10058.969Poecilia_latipinna
ENSXETG00000003166cnot39788.387ENSPMEG00000017718cnot3a7085.759Poecilia_mexicana
ENSXETG00000003166cnot38888.350ENSPMEG00000010184cnot3b10059.076Poecilia_mexicana
ENSXETG00000003166cnot38677.027ENSPREG00000000662cnot3b9755.165Poecilia_reticulata
ENSXETG00000003166cnot38987.419ENSPREG00000007592cnot3a8484.496Poecilia_reticulata
ENSXETG00000003166cnot310076.772ENSPPYG00000010372CNOT39197.078Pongo_abelii
ENSXETG00000003166cnot37897.458ENSPCAG00000011999CNOT37497.458Procavia_capensis
ENSXETG00000003166cnot310078.378ENSPCOG00000017673CNOT38995.752Propithecus_coquereli
ENSXETG00000003166cnot310075.033ENSPVAG00000015564CNOT39095.527Pteropus_vampyrus
ENSXETG00000003166cnot38889.320ENSPNYG00000002282cnot3a6987.220Pundamilia_nyererei
ENSXETG00000003166cnot39785.342ENSPNYG00000003358cnot3b6871.759Pundamilia_nyererei
ENSXETG00000003166cnot39788.673ENSPNAG00000027459cnot3b10059.611Pygocentrus_nattereri
ENSXETG00000003166cnot38988.026ENSPNAG00000017679cnot3a7287.582Pygocentrus_nattereri
ENSXETG00000003166cnot310078.215ENSRNOG00000053234Cnot38997.727Rattus_norvegicus
ENSXETG00000003166cnot310077.368ENSRBIG00000031025CNOT38697.403Rhinopithecus_bieti
ENSXETG00000003166cnot310077.368ENSRROG00000003872CNOT38697.403Rhinopithecus_roxellana
ENSXETG00000003166cnot310079.428ENSSBOG00000030268CNOT38697.403Saimiri_boliviensis_boliviensis
ENSXETG00000003166cnot38890.615ENSSFOG00015000248cnot310059.935Scleropages_formosus
ENSXETG00000003166cnot38890.939ENSSFOG00015019203-10059.155Scleropages_formosus
ENSXETG00000003166cnot38887.702ENSSMAG00000013235cnot3a6986.581Scophthalmus_maximus
ENSXETG00000003166cnot38990.615ENSSMAG00000016031cnot3b6088.782Scophthalmus_maximus
ENSXETG00000003166cnot38888.424ENSSDUG00000008181cnot3a8783.712Seriola_dumerili
ENSXETG00000003166cnot38891.586ENSSDUG00000003428cnot3b7491.176Seriola_dumerili
ENSXETG00000003166cnot38489.644ENSSLDG00000014733cnot3a6787.540Seriola_lalandi_dorsalis
ENSXETG00000003166cnot38891.586ENSSLDG00000014376cnot3b7491.176Seriola_lalandi_dorsalis
ENSXETG00000003166cnot310086.831ENSSPUG00000008510CNOT310090.058Sphenodon_punctatus
ENSXETG00000003166cnot38488.997ENSSPAG00000003858cnot3a6786.901Stegastes_partitus
ENSXETG00000003166cnot38890.615ENSSPAG00000001429cnot3b7890.196Stegastes_partitus
ENSXETG00000003166cnot310076.540ENSSSCG00000003264CNOT39197.403Sus_scrofa
ENSXETG00000003166cnot37089.320ENSTRUG00000007248cnot3b5089.869Takifugu_rubripes
ENSXETG00000003166cnot38889.644ENSTRUG00000015732cnot3a6987.859Takifugu_rubripes
ENSXETG00000003166cnot38089.769ENSTNIG00000008082cnot3a6788.449Tetraodon_nigroviridis
ENSXETG00000003166cnot37579.459ENSTNIG00000005663cnot3b7589.869Tetraodon_nigroviridis
ENSXETG00000003166cnot35299.248ENSTBEG00000009620-5499.248Tupaia_belangeri
ENSXETG00000003166cnot35998.137ENSTTRG00000006567CNOT37998.137Tursiops_truncatus
ENSXETG00000003166cnot310076.781ENSUAMG00000005234CNOT39197.078Ursus_americanus
ENSXETG00000003166cnot37894.719ENSUMAG00000010934CNOT310093.929Ursus_maritimus
ENSXETG00000003166cnot35094.340ENSVPAG00000001320-5095.050Vicugna_pacos
ENSXETG00000003166cnot39977.661ENSVVUG00000008239CNOT39097.403Vulpes_vulpes
ENSXETG00000003166cnot38487.500ENSXCOG00000019460cnot3a8291.064Xiphophorus_couchianus
ENSXETG00000003166cnot37688.627ENSXCOG00000018976cnot3b9956.561Xiphophorus_couchianus
ENSXETG00000003166cnot38888.350ENSXMAG00000014176cnot3b10059.979Xiphophorus_maculatus
ENSXETG00000003166cnot38888.387ENSXMAG00000012273cnot3a7085.759Xiphophorus_maculatus

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