EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000003245 (Gene tree)
Gene ID: -
Gene Symbol: ddx42
Alias: -
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 10034 bases
Position: chrGL172791.1:2091374-2101407
Accession: XB-GENE-972670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000007050	ResIII	PF04851.15	5.3e-07	1	1
ENSXETP00000007050	DEAD	PF00270.29	4.7e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000007050	-	3307	XM_002935524	ENSXETP00000007050	943 (aa)	XP_002935570	F6X659

Gene Model

Click here to download ENSXETG00000003245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000003245's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000003245	ddx42	50	42.292	ENSXETG00000012580	ddx5	90	38.721
ENSXETG00000003245	ddx42	58	40.957	ENSXETG00000010405	ddx46	54	40.773

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000003245	ddx42	100	75.440	ENSG00000198231	DDX42	100	85.577	Homo_sapiens
ENSXETG00000003245	ddx42	89	76.257	ENSAPOG00000017675	ddx42	99	74.201	Acanthochromis_polyacanthus
ENSXETG00000003245	ddx42	100	75.206	ENSAMEG00000003200	DDX42	100	76.763	Ailuropoda_melanoleuca
ENSXETG00000003245	ddx42	85	71.040	ENSACIG00000007376	ddx42	99	72.772	Amphilophus_citrinellus
ENSXETG00000003245	ddx42	100	71.008	ENSAOCG00000003520	ddx42	100	72.584	Amphiprion_ocellaris
ENSXETG00000003245	ddx42	100	71.563	ENSAPEG00000000984	ddx42	100	72.947	Amphiprion_percula
ENSXETG00000003245	ddx42	100	72.222	ENSATEG00000022920	ddx42	100	72.718	Anabas_testudineus
ENSXETG00000003245	ddx42	100	76.121	ENSAPLG00000010544	DDX42	100	76.477	Anas_platyrhynchos
ENSXETG00000003245	ddx42	100	76.275	ENSACAG00000003994	DDX42	99	77.092	Anolis_carolinensis
ENSXETG00000003245	ddx42	100	76.434	ENSANAG00000035693	DDX42	99	81.215	Aotus_nancymaae
ENSXETG00000003245	ddx42	89	76.235	ENSACLG00000025113	ddx42	100	72.316	Astatotilapia_calliptera
ENSXETG00000003245	ddx42	86	73.366	ENSAMXG00000011435	ddx42	100	69.632	Astyanax_mexicanus
ENSXETG00000003245	ddx42	100	75.393	ENSBTAG00000021058	DDX42	98	80.912	Bos_taurus
ENSXETG00000003245	ddx42	63	52.821	WBGene00008119	C46F11.4	79	53.077	Caenorhabditis_elegans
ENSXETG00000003245	ddx42	100	76.360	ENSCJAG00000019649	DDX42	96	88.306	Callithrix_jacchus
ENSXETG00000003245	ddx42	100	75.155	ENSCAFG00000012818	DDX42	100	76.458	Canis_familiaris
ENSXETG00000003245	ddx42	100	75.052	ENSCAFG00020026631	DDX42	100	76.354	Canis_lupus_dingo
ENSXETG00000003245	ddx42	100	75.290	ENSCHIG00000014431	DDX42	100	76.874	Capra_hircus
ENSXETG00000003245	ddx42	100	74.663	ENSTSYG00000001380	DDX42	100	75.519	Carlito_syrichta
ENSXETG00000003245	ddx42	72	62.974	ENSCAPG00000013621	DDX42	94	62.974	Cavia_aperea
ENSXETG00000003245	ddx42	100	74.354	ENSCPOG00000005633	DDX42	100	76.360	Cavia_porcellus
ENSXETG00000003245	ddx42	100	72.205	ENSCCAG00000020612	DDX42	97	81.702	Cebus_capucinus
ENSXETG00000003245	ddx42	100	76.360	ENSCATG00000030490	DDX42	100	76.360	Cercocebus_atys
ENSXETG00000003245	ddx42	100	76.649	ENSCLAG00000003497	DDX42	100	76.649	Chinchilla_lanigera
ENSXETG00000003245	ddx42	100	71.694	ENSCSAG00000003914	DDX42	100	72.567	Chlorocebus_sabaeus
ENSXETG00000003245	ddx42	76	89.286	ENSCHOG00000006241	DDX42	76	89.286	Choloepus_hoffmanni
ENSXETG00000003245	ddx42	100	76.225	ENSCPBG00000026682	DDX42	100	76.161	Chrysemys_picta_bellii
ENSXETG00000003245	ddx42	100	76.360	ENSCANG00000034663	DDX42	99	81.948	Colobus_angolensis_palliatus
ENSXETG00000003245	ddx42	100	75.544	ENSCGRG00001009775	Ddx42	100	77.158	Cricetulus_griseus_chok1gshd
ENSXETG00000003245	ddx42	100	75.544	ENSCGRG00000011718	Ddx42	100	77.158	Cricetulus_griseus_crigri
ENSXETG00000003245	ddx42	100	71.429	ENSCSEG00000021574	ddx42	100	71.895	Cynoglossus_semilaevis
ENSXETG00000003245	ddx42	100	69.937	ENSCVAG00000011404	ddx42	100	70.992	Cyprinodon_variegatus
ENSXETG00000003245	ddx42	100	70.984	ENSDARG00000037928	ddx42	100	71.813	Danio_rerio
ENSXETG00000003245	ddx42	100	73.181	ENSDNOG00000007961	DDX42	100	74.271	Dasypus_novemcinctus
ENSXETG00000003245	ddx42	100	69.383	ENSDORG00000004199	Ddx42	100	69.383	Dipodomys_ordii
ENSXETG00000003245	ddx42	65	60.995	FBgn0036104	CG6418	87	57.349	Drosophila_melanogaster
ENSXETG00000003245	ddx42	82	70.064	ENSEBUG00000001155	ddx42	93	70.064	Eptatretus_burgeri
ENSXETG00000003245	ddx42	100	75.362	ENSEASG00005013089	DDX42	99	81.792	Equus_asinus_asinus
ENSXETG00000003245	ddx42	100	76.021	ENSECAG00000022684	DDX42	100	76.379	Equus_caballus
ENSXETG00000003245	ddx42	58	88.016	ENSEEUG00000009144	DDX42	74	88.016	Erinaceus_europaeus
ENSXETG00000003245	ddx42	100	71.324	ENSELUG00000020593	ddx42	100	71.369	Esox_lucius
ENSXETG00000003245	ddx42	100	74.559	ENSFCAG00000003499	DDX42	100	76.324	Felis_catus
ENSXETG00000003245	ddx42	95	76.170	ENSFALG00000004675	DDX42	77	78.781	Ficedula_albicollis
ENSXETG00000003245	ddx42	100	76.305	ENSFDAG00000020516	DDX42	100	76.803	Fukomys_damarensis
ENSXETG00000003245	ddx42	100	68.592	ENSFHEG00000023290	ddx42	100	70.094	Fundulus_heteroclitus
ENSXETG00000003245	ddx42	75	76.629	ENSGMOG00000004595	ddx42	88	76.803	Gadus_morhua
ENSXETG00000003245	ddx42	100	75.413	ENSGALG00000000581	DDX42	100	76.215	Gallus_gallus
ENSXETG00000003245	ddx42	89	74.584	ENSGAFG00000011846	ddx42	97	74.186	Gambusia_affinis
ENSXETG00000003245	ddx42	100	67.194	ENSGACG00000009782	ddx42	100	67.405	Gasterosteus_aculeatus
ENSXETG00000003245	ddx42	100	77.131	ENSGAGG00000024411	DDX42	99	77.131	Gopherus_agassizii
ENSXETG00000003245	ddx42	100	76.360	ENSGGOG00000006779	DDX42	98	81.418	Gorilla_gorilla
ENSXETG00000003245	ddx42	89	76.235	ENSHBUG00000008705	ddx42	100	72.316	Haplochromis_burtoni
ENSXETG00000003245	ddx42	100	72.537	ENSHGLG00000010024	DDX42	100	72.537	Heterocephalus_glaber_female
ENSXETG00000003245	ddx42	86	60.671	ENSHGLG00100007138	-	92	60.552	Heterocephalus_glaber_male
ENSXETG00000003245	ddx42	100	75.442	ENSHGLG00100004479	-	100	76.146	Heterocephalus_glaber_male
ENSXETG00000003245	ddx42	83	76.501	ENSHCOG00000003357	ddx42	98	72.300	Hippocampus_comes
ENSXETG00000003245	ddx42	79	79.576	ENSIPUG00000013327	ddx42	100	69.738	Ictalurus_punctatus
ENSXETG00000003245	ddx42	100	76.250	ENSSTOG00000008922	DDX42	100	76.385	Ictidomys_tridecemlineatus
ENSXETG00000003245	ddx42	100	76.440	ENSJJAG00000011727	Ddx42	100	76.385	Jaculus_jaculus
ENSXETG00000003245	ddx42	100	69.885	ENSKMAG00000009914	ddx42	100	71.160	Kryptolebias_marmoratus
ENSXETG00000003245	ddx42	100	65.890	ENSLBEG00000004687	ddx42	100	65.897	Labrus_bergylta
ENSXETG00000003245	ddx42	99	72.680	ENSLACG00000013476	DDX42	97	75.079	Latimeria_chalumnae
ENSXETG00000003245	ddx42	100	73.840	ENSLOCG00000011764	ddx42	100	75.184	Lepisosteus_oculatus
ENSXETG00000003245	ddx42	100	75.000	ENSLAFG00000003249	DDX42	100	75.934	Loxodonta_africana
ENSXETG00000003245	ddx42	100	76.360	ENSMFAG00000031356	DDX42	100	76.360	Macaca_fascicularis
ENSXETG00000003245	ddx42	100	76.434	ENSMMUG00000016762	DDX42	96	81.303	Macaca_mulatta
ENSXETG00000003245	ddx42	100	76.360	ENSMNEG00000038250	DDX42	100	76.360	Macaca_nemestrina
ENSXETG00000003245	ddx42	100	75.259	ENSMLEG00000043080	DDX42	100	76.141	Mandrillus_leucophaeus
ENSXETG00000003245	ddx42	89	76.033	ENSMAMG00000021888	ddx42	98	71.798	Mastacembelus_armatus
ENSXETG00000003245	ddx42	89	76.235	ENSMZEG00005023103	ddx42	100	72.316	Maylandia_zebra
ENSXETG00000003245	ddx42	100	75.413	ENSMGAG00000001822	DDX42	100	75.512	Meleagris_gallopavo
ENSXETG00000003245	ddx42	75	82.128	ENSMAUG00000020774	-	94	82.128	Mesocricetus_auratus
ENSXETG00000003245	ddx42	100	75.996	ENSMICG00000009952	DDX42	100	75.996	Microcebus_murinus
ENSXETG00000003245	ddx42	100	76.551	ENSMOCG00000015504	Ddx42	100	76.866	Microtus_ochrogaster
ENSXETG00000003245	ddx42	89	71.445	ENSMMOG00000016963	ddx42	86	71.395	Mola_mola
ENSXETG00000003245	ddx42	100	70.794	ENSMALG00000007800	ddx42	100	71.670	Monopterus_albus
ENSXETG00000003245	ddx42	100	75.259	MGP_CAROLIEiJ_G0017314	Ddx42	100	77.239	Mus_caroli
ENSXETG00000003245	ddx42	100	75.129	ENSMUSG00000020705	Ddx42	100	77.101	Mus_musculus
ENSXETG00000003245	ddx42	71	89.614	MGP_PahariEiJ_G0018444	-	96	89.691	Mus_pahari
ENSXETG00000003245	ddx42	100	75.232	MGP_SPRETEiJ_G0018158	Ddx42	100	77.239	Mus_spretus
ENSXETG00000003245	ddx42	100	75.916	ENSMPUG00000014921	DDX42	100	76.538	Mustela_putorius_furo
ENSXETG00000003245	ddx42	100	75.207	ENSMLUG00000011645	DDX42	100	75.901	Myotis_lucifugus
ENSXETG00000003245	ddx42	100	76.440	ENSNGAG00000021897	Ddx42	100	76.649	Nannospalax_galili
ENSXETG00000003245	ddx42	89	74.941	ENSNBRG00000004466	ddx42	100	71.263	Neolamprologus_brichardi
ENSXETG00000003245	ddx42	100	76.255	ENSNLEG00000004248	DDX42	99	81.418	Nomascus_leucogenys
ENSXETG00000003245	ddx42	75	75.086	ENSMEUG00000013227	-	85	75.086	Notamacropus_eugenii
ENSXETG00000003245	ddx42	100	75.815	ENSOPRG00000014960	DDX42	100	75.938	Ochotona_princeps
ENSXETG00000003245	ddx42	100	73.465	ENSODEG00000007810	DDX42	100	73.465	Octodon_degus
ENSXETG00000003245	ddx42	89	76.353	ENSONIG00000000734	ddx42	100	72.421	Oreochromis_niloticus
ENSXETG00000003245	ddx42	57	86.296	ENSOANG00000000265	DDX42	100	86.296	Ornithorhynchus_anatinus
ENSXETG00000003245	ddx42	92	78.412	ENSOCUG00000004304	DDX42	88	79.083	Oryctolagus_cuniculus
ENSXETG00000003245	ddx42	100	70.706	ENSORLG00000002395	ddx42	100	69.809	Oryzias_latipes
ENSXETG00000003245	ddx42	100	70.285	ENSORLG00020011621	ddx42	100	71.278	Oryzias_latipes_hni
ENSXETG00000003245	ddx42	100	70.116	ENSORLG00015004487	ddx42	100	70.961	Oryzias_latipes_hsok
ENSXETG00000003245	ddx42	100	69.360	ENSOMEG00000020093	ddx42	100	72.228	Oryzias_melastigma
ENSXETG00000003245	ddx42	100	74.923	ENSOGAG00000006872	DDX42	100	75.620	Otolemur_garnettii
ENSXETG00000003245	ddx42	100	74.716	ENSOARG00000013540	DDX42	100	76.403	Ovis_aries
ENSXETG00000003245	ddx42	100	76.360	ENSPPAG00000007496	DDX42	98	81.429	Pan_paniscus
ENSXETG00000003245	ddx42	100	74.559	ENSPPRG00000002740	DDX42	100	76.354	Panthera_pardus
ENSXETG00000003245	ddx42	100	74.715	ENSPTIG00000009932	DDX42	100	76.428	Panthera_tigris_altaica
ENSXETG00000003245	ddx42	100	76.360	ENSPTRG00000009523	DDX42	98	81.429	Pan_troglodytes
ENSXETG00000003245	ddx42	100	76.255	ENSPANG00000020990	DDX42	100	76.255	Papio_anubis
ENSXETG00000003245	ddx42	100	69.488	ENSPKIG00000002901	ddx42	100	69.488	Paramormyrops_kingsleyae
ENSXETG00000003245	ddx42	83	84.937	ENSPSIG00000010289	DDX42	96	85.443	Pelodiscus_sinensis
ENSXETG00000003245	ddx42	100	68.148	ENSPMGG00000009323	ddx42	100	69.409	Periophthalmus_magnuspinnatus
ENSXETG00000003245	ddx42	100	75.026	ENSPEMG00000006755	Ddx42	100	76.600	Peromyscus_maniculatus_bairdii
ENSXETG00000003245	ddx42	79	71.053	ENSPMAG00000005580	ddx42	99	71.711	Petromyzon_marinus
ENSXETG00000003245	ddx42	100	76.062	ENSPCIG00000009093	DDX42	100	76.580	Phascolarctos_cinereus
ENSXETG00000003245	ddx42	100	70.490	ENSPFOG00000014104	ddx42	100	72.245	Poecilia_formosa
ENSXETG00000003245	ddx42	100	70.490	ENSPLAG00000010522	ddx42	100	72.245	Poecilia_latipinna
ENSXETG00000003245	ddx42	100	70.282	ENSPMEG00000010744	ddx42	100	71.901	Poecilia_mexicana
ENSXETG00000003245	ddx42	100	69.949	ENSPREG00000009926	ddx42	100	72.332	Poecilia_reticulata
ENSXETG00000003245	ddx42	100	73.368	ENSPPYG00000008531	DDX42	100	74.170	Pongo_abelii
ENSXETG00000003245	ddx42	92	69.843	ENSPCAG00000002474	DDX42	100	71.011	Procavia_capensis
ENSXETG00000003245	ddx42	100	66.529	ENSPCOG00000001559	DDX42	99	73.844	Propithecus_coquereli
ENSXETG00000003245	ddx42	100	74.553	ENSPVAG00000000160	DDX42	100	74.763	Pteropus_vampyrus
ENSXETG00000003245	ddx42	74	74.682	ENSPNYG00000013954	ddx42	97	70.260	Pundamilia_nyererei
ENSXETG00000003245	ddx42	86	72.835	ENSPNAG00000017352	ddx42	100	69.405	Pygocentrus_nattereri
ENSXETG00000003245	ddx42	100	74.716	ENSRNOG00000009474	Ddx42	100	76.538	Rattus_norvegicus
ENSXETG00000003245	ddx42	100	76.440	ENSRBIG00000004781	DDX42	99	82.066	Rhinopithecus_bieti
ENSXETG00000003245	ddx42	100	76.440	ENSRROG00000029794	DDX42	100	76.440	Rhinopithecus_roxellana
ENSXETG00000003245	ddx42	100	76.514	ENSSBOG00000029624	DDX42	98	81.560	Saimiri_boliviensis_boliviensis
ENSXETG00000003245	ddx42	100	76.062	ENSSHAG00000012896	-	100	76.580	Sarcophilus_harrisii
ENSXETG00000003245	ddx42	71	50.735	ENSSHAG00000007919	-	99	50.735	Sarcophilus_harrisii
ENSXETG00000003245	ddx42	81	79.306	ENSSFOG00015014064	ddx42	96	71.413	Scleropages_formosus
ENSXETG00000003245	ddx42	100	70.390	ENSSMAG00000009077	ddx42	100	71.410	Scophthalmus_maximus
ENSXETG00000003245	ddx42	100	70.650	ENSSDUG00000022221	ddx42	100	72.327	Seriola_dumerili
ENSXETG00000003245	ddx42	100	70.370	ENSSLDG00000018483	ddx42	100	71.746	Seriola_lalandi_dorsalis
ENSXETG00000003245	ddx42	100	74.974	ENSSARG00000009847	DDX42	100	76.112	Sorex_araneus
ENSXETG00000003245	ddx42	100	77.035	ENSSPUG00000018806	DDX42	100	77.035	Sphenodon_punctatus
ENSXETG00000003245	ddx42	89	76.353	ENSSPAG00000013055	ddx42	100	72.737	Stegastes_partitus
ENSXETG00000003245	ddx42	86	73.438	ENSSSCG00000017289	DDX42	97	74.880	Sus_scrofa
ENSXETG00000003245	ddx42	100	75.417	ENSTGUG00000001931	DDX42	100	75.941	Taeniopygia_guttata
ENSXETG00000003245	ddx42	100	70.042	ENSTRUG00000010711	ddx42	99	81.027	Takifugu_rubripes
ENSXETG00000003245	ddx42	79	83.199	ENSTBEG00000010159	DDX42	98	83.199	Tupaia_belangeri
ENSXETG00000003245	ddx42	100	75.232	ENSTTRG00000006962	DDX42	100	77.077	Tursiops_truncatus
ENSXETG00000003245	ddx42	100	75.905	ENSUAMG00000007321	DDX42	100	76.161	Ursus_americanus
ENSXETG00000003245	ddx42	100	75.491	ENSUMAG00000017438	DDX42	100	75.934	Ursus_maritimus
ENSXETG00000003245	ddx42	94	82.432	ENSVPAG00000009633	DDX42	94	82.432	Vicugna_pacos
ENSXETG00000003245	ddx42	100	75.546	ENSVVUG00000006095	DDX42	100	76.349	Vulpes_vulpes
ENSXETG00000003245	ddx42	85	70.435	ENSXCOG00000017560	ddx42	97	71.020	Xiphophorus_couchianus
ENSXETG00000003245	ddx42	100	71.172	ENSXMAG00000008138	ddx42	100	71.882	Xiphophorus_maculatus