EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000003430 (Gene tree)
Gene ID: -
Gene Symbol: rrp12
Alias: -
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 36548 bases
Position: chrGL173153.1:492470-529017
Accession: XB-GENE-993600
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000007432	NUC173	PF08161.12	1.1e-77	1	1
ENSXETP00000058899	NUC173	PF08161.12	1.2e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000064926	-	3946	-	ENSXETP00000058899	1296 (aa)	-	F6VYE6
ENSXETT00000007432	-	3928	-	ENSXETP00000007432	1290 (aa)	-	F6SHB8

Gene Model

Click here to download ENSXETG00000003430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000003430's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000003430	rrp12	92	75.163	ENSG00000052749	RRP12	100	78.125	Homo_sapiens
ENSXETG00000003430	rrp12	99	65.840	ENSAPOG00000013355	rrp12	99	65.666	Acanthochromis_polyacanthus
ENSXETG00000003430	rrp12	99	66.641	ENSAMEG00000000134	RRP12	99	67.127	Ailuropoda_melanoleuca
ENSXETG00000003430	rrp12	99	66.848	ENSACIG00000022673	rrp12	99	66.744	Amphilophus_citrinellus
ENSXETG00000003430	rrp12	99	66.693	ENSAOCG00000016149	rrp12	99	66.512	Amphiprion_ocellaris
ENSXETG00000003430	rrp12	99	66.641	ENSAPEG00000016023	rrp12	99	66.409	Amphiprion_percula
ENSXETG00000003430	rrp12	99	65.606	ENSATEG00000022627	rrp12	99	65.432	Anabas_testudineus
ENSXETG00000003430	rrp12	97	62.212	ENSAPLG00000014387	RRP12	99	62.291	Anas_platyrhynchos
ENSXETG00000003430	rrp12	99	63.390	ENSACAG00000002175	RRP12	99	63.390	Anolis_carolinensis
ENSXETG00000003430	rrp12	92	75.817	ENSANAG00000037485	RRP12	99	75.817	Aotus_nancymaae
ENSXETG00000003430	rrp12	99	66.667	ENSACLG00000007354	rrp12	99	66.718	Astatotilapia_calliptera
ENSXETG00000003430	rrp12	99	63.876	ENSAMXG00000012852	rrp12	99	63.953	Astyanax_mexicanus
ENSXETG00000003430	rrp12	99	67.154	ENSBTAG00000002191	RRP12	99	67.333	Bos_taurus
ENSXETG00000003430	rrp12	85	65.399	ENSCJAG00000016549	-	99	65.580	Callithrix_jacchus
ENSXETG00000003430	rrp12	99	67.383	ENSCAFG00000009043	RRP12	99	67.690	Canis_familiaris
ENSXETG00000003430	rrp12	99	67.383	ENSCAFG00020005991	RRP12	99	67.690	Canis_lupus_dingo
ENSXETG00000003430	rrp12	99	64.954	ENSCHIG00000011876	RRP12	99	64.954	Capra_hircus
ENSXETG00000003430	rrp12	53	58.333	ENSTSYG00000030210	-	99	58.764	Carlito_syrichta
ENSXETG00000003430	rrp12	96	60.543	ENSCAPG00000008991	RRP12	98	60.128	Cavia_aperea
ENSXETG00000003430	rrp12	99	66.667	ENSCPOG00000004215	RRP12	99	66.821	Cavia_porcellus
ENSXETG00000003430	rrp12	80	71.239	ENSCCAG00000024088	RRP12	99	72.458	Cebus_capucinus
ENSXETG00000003430	rrp12	70	61.639	ENSCCAG00000033123	-	83	61.993	Cebus_capucinus
ENSXETG00000003430	rrp12	99	63.525	ENSCATG00000045310	RRP12	99	63.525	Cercocebus_atys
ENSXETG00000003430	rrp12	99	66.180	ENSCLAG00000003753	RRP12	99	66.257	Chinchilla_lanigera
ENSXETG00000003430	rrp12	88	66.667	ENSCSAG00000005877	RRP12	99	66.667	Chlorocebus_sabaeus
ENSXETG00000003430	rrp12	59	73.588	ENSCHOG00000003095	-	61	73.920	Choloepus_hoffmanni
ENSXETG00000003430	rrp12	94	68.590	ENSCPBG00000011935	RRP12	97	68.590	Chrysemys_picta_bellii
ENSXETG00000003430	rrp12	63	40.592	ENSCSAVG00000006059	-	99	40.378	Ciona_savignyi
ENSXETG00000003430	rrp12	92	75.817	ENSCANG00000031653	RRP12	99	75.817	Colobus_angolensis_palliatus
ENSXETG00000003430	rrp12	90	67.092	ENSCGRG00001004338	Rrp12	99	67.092	Cricetulus_griseus_chok1gshd
ENSXETG00000003430	rrp12	99	66.308	ENSCGRG00000011965	Rrp12	99	66.308	Cricetulus_griseus_crigri
ENSXETG00000003430	rrp12	99	65.039	ENSCSEG00000007799	rrp12	99	65.116	Cynoglossus_semilaevis
ENSXETG00000003430	rrp12	99	66.745	ENSCVAG00000003418	rrp12	99	66.641	Cyprinodon_variegatus
ENSXETG00000003430	rrp12	99	64.988	ENSDARG00000022410	rrp12	99	65.204	Danio_rerio
ENSXETG00000003430	rrp12	99	66.461	ENSDNOG00000005120	RRP12	99	66.615	Dasypus_novemcinctus
ENSXETG00000003430	rrp12	99	67.001	ENSDORG00000009199	Rrp12	99	66.820	Dipodomys_ordii
ENSXETG00000003430	rrp12	92	56.938	ENSETEG00000002455	RRP12	93	57.207	Echinops_telfairi
ENSXETG00000003430	rrp12	84	76.271	ENSEBUG00000006555	rrp12	100	53.448	Eptatretus_burgeri
ENSXETG00000003430	rrp12	99	67.410	ENSEASG00005008693	RRP12	99	67.615	Equus_asinus_asinus
ENSXETG00000003430	rrp12	94	67.349	ENSECAG00000010892	RRP12	99	67.568	Equus_caballus
ENSXETG00000003430	rrp12	64	63.636	ENSEEUG00000005447	-	65	63.636	Erinaceus_europaeus
ENSXETG00000003430	rrp12	99	64.715	ENSELUG00000010510	rrp12	100	64.226	Esox_lucius
ENSXETG00000003430	rrp12	92	75.817	ENSFCAG00000028639	RRP12	99	75.817	Felis_catus
ENSXETG00000003430	rrp12	93	66.584	ENSFALG00000008458	RRP12	99	66.667	Ficedula_albicollis
ENSXETG00000003430	rrp12	100	66.692	ENSFDAG00000019108	RRP12	95	66.923	Fukomys_damarensis
ENSXETG00000003430	rrp12	99	60.311	ENSFHEG00000004148	rrp12	99	60.062	Fundulus_heteroclitus
ENSXETG00000003430	rrp12	95	68.429	ENSGMOG00000004188	rrp12	95	68.429	Gadus_morhua
ENSXETG00000003430	rrp12	99	66.692	ENSGALG00000041331	RRP12	96	67.609	Gallus_gallus
ENSXETG00000003430	rrp12	99	65.835	ENSGAFG00000009038	rrp12	99	65.659	Gambusia_affinis
ENSXETG00000003430	rrp12	99	64.280	ENSGACG00000007175	rrp12	99	64.114	Gasterosteus_aculeatus
ENSXETG00000003430	rrp12	67	71.626	ENSGAGG00000019169	RRP12	96	71.780	Gopherus_agassizii
ENSXETG00000003430	rrp12	92	75.163	ENSGGOG00000014850	RRP12	99	67.896	Gorilla_gorilla
ENSXETG00000003430	rrp12	99	66.900	ENSHBUG00000023527	rrp12	99	66.718	Haplochromis_burtoni
ENSXETG00000003430	rrp12	99	66.667	ENSHGLG00000016772	RRP12	99	66.821	Heterocephalus_glaber_female
ENSXETG00000003430	rrp12	99	66.667	ENSHGLG00100015110	RRP12	99	66.821	Heterocephalus_glaber_male
ENSXETG00000003430	rrp12	99	63.622	ENSHCOG00000019519	rrp12	99	63.488	Hippocampus_comes
ENSXETG00000003430	rrp12	99	63.333	ENSIPUG00000000311	RRP12	99	63.700	Ictalurus_punctatus
ENSXETG00000003430	rrp12	99	68.129	ENSSTOG00000006515	RRP12	99	68.360	Ictidomys_tridecemlineatus
ENSXETG00000003430	rrp12	96	67.252	ENSJJAG00000000110	Rrp12	99	67.252	Jaculus_jaculus
ENSXETG00000003430	rrp12	99	65.732	ENSKMAG00000020621	rrp12	99	65.557	Kryptolebias_marmoratus
ENSXETG00000003430	rrp12	99	63.207	ENSLBEG00000015335	rrp12	99	63.341	Labrus_bergylta
ENSXETG00000003430	rrp12	72	64.794	ENSLACG00000016633	RRP12	81	64.794	Latimeria_chalumnae
ENSXETG00000003430	rrp12	99	63.679	ENSLOCG00000003846	rrp12	99	63.601	Lepisosteus_oculatus
ENSXETG00000003430	rrp12	99	67.690	ENSLAFG00000015965	RRP12	99	67.767	Loxodonta_africana
ENSXETG00000003430	rrp12	92	75.163	ENSMFAG00000041558	RRP12	99	75.163	Macaca_fascicularis
ENSXETG00000003430	rrp12	92	75.163	ENSMMUG00000019634	RRP12	99	75.163	Macaca_mulatta
ENSXETG00000003430	rrp12	92	75.163	ENSMNEG00000036759	RRP12	99	75.163	Macaca_nemestrina
ENSXETG00000003430	rrp12	92	75.817	ENSMLEG00000041317	RRP12	99	75.817	Mandrillus_leucophaeus
ENSXETG00000003430	rrp12	99	64.743	ENSMAMG00000002964	rrp12	99	65.815	Mastacembelus_armatus
ENSXETG00000003430	rrp12	99	66.899	ENSMZEG00005003241	rrp12	99	66.873	Maylandia_zebra
ENSXETG00000003430	rrp12	98	65.759	ENSMGAG00000009829	RRP12	98	65.936	Meleagris_gallopavo
ENSXETG00000003430	rrp12	99	65.050	ENSMAUG00000020743	Rrp12	99	65.050	Mesocricetus_auratus
ENSXETG00000003430	rrp12	99	67.333	ENSMICG00000007624	RRP12	99	74.026	Microcebus_murinus
ENSXETG00000003430	rrp12	99	67.590	ENSMOCG00000006753	Rrp12	99	67.590	Microtus_ochrogaster
ENSXETG00000003430	rrp12	99	64.683	ENSMMOG00000010708	rrp12	99	64.683	Mola_mola
ENSXETG00000003430	rrp12	99	67.465	ENSMODG00000004315	RRP12	99	67.336	Monodelphis_domestica
ENSXETG00000003430	rrp12	99	62.374	ENSMALG00000016560	rrp12	99	65.765	Monopterus_albus
ENSXETG00000003430	rrp12	99	66.794	MGP_CAROLIEiJ_G0022957	Rrp12	99	66.947	Mus_caroli
ENSXETG00000003430	rrp12	99	67.436	ENSMUSG00000035049	Rrp12	99	67.436	Mus_musculus
ENSXETG00000003430	rrp12	99	67.256	MGP_PahariEiJ_G0014447	Rrp12	99	67.590	Mus_pahari
ENSXETG00000003430	rrp12	99	67.667	MGP_SPRETEiJ_G0023878	Rrp12	99	67.667	Mus_spretus
ENSXETG00000003430	rrp12	99	67.280	ENSMPUG00000017046	RRP12	99	67.333	Mustela_putorius_furo
ENSXETG00000003430	rrp12	99	67.715	ENSMLUG00000017160	RRP12	99	67.969	Myotis_lucifugus
ENSXETG00000003430	rrp12	100	67.590	ENSNGAG00000024144	Rrp12	100	67.590	Nannospalax_galili
ENSXETG00000003430	rrp12	99	66.589	ENSNBRG00000009987	rrp12	99	66.409	Neolamprologus_brichardi
ENSXETG00000003430	rrp12	92	75.163	ENSNLEG00000013762	RRP12	99	75.163	Nomascus_leucogenys
ENSXETG00000003430	rrp12	99	62.016	ENSMEUG00000003185	RRP12	99	62.016	Notamacropus_eugenii
ENSXETG00000003430	rrp12	94	68.439	ENSOPRG00000005001	RRP12	94	68.439	Ochotona_princeps
ENSXETG00000003430	rrp12	99	65.944	ENSODEG00000016439	RRP12	99	66.176	Octodon_degus
ENSXETG00000003430	rrp12	99	67.288	ENSONIG00000009528	rrp12	99	67.104	Oreochromis_niloticus
ENSXETG00000003430	rrp12	99	62.798	ENSOANG00000006560	RRP12	99	62.721	Ornithorhynchus_anatinus
ENSXETG00000003430	rrp12	99	67.027	ENSOCUG00000005662	RRP12	99	67.027	Oryctolagus_cuniculus
ENSXETG00000003430	rrp12	99	65.759	ENSORLG00000008688	rrp12	99	66.272	Oryzias_latipes
ENSXETG00000003430	rrp12	98	65.585	ENSORLG00020002355	rrp12	99	65.506	Oryzias_latipes_hni
ENSXETG00000003430	rrp12	99	65.759	ENSORLG00015006709	rrp12	99	65.507	Oryzias_latipes_hsok
ENSXETG00000003430	rrp12	98	65.794	ENSOMEG00000002609	rrp12	99	65.848	Oryzias_melastigma
ENSXETG00000003430	rrp12	100	66.820	ENSOGAG00000001626	RRP12	100	66.922	Otolemur_garnettii
ENSXETG00000003430	rrp12	99	66.155	ENSOARG00000009681	RRP12	99	66.078	Ovis_aries
ENSXETG00000003430	rrp12	92	75.163	ENSPPAG00000043885	RRP12	100	65.895	Pan_paniscus
ENSXETG00000003430	rrp12	92	75.817	ENSPPRG00000002029	RRP12	99	75.817	Panthera_pardus
ENSXETG00000003430	rrp12	92	75.817	ENSPTIG00000004428	RRP12	99	75.817	Panthera_tigris_altaica
ENSXETG00000003430	rrp12	92	75.163	ENSPTRG00000002806	RRP12	100	65.895	Pan_troglodytes
ENSXETG00000003430	rrp12	92	75.817	ENSPANG00000021360	RRP12	99	75.817	Papio_anubis
ENSXETG00000003430	rrp12	99	64.738	ENSPKIG00000016516	rrp12	99	64.715	Paramormyrops_kingsleyae
ENSXETG00000003430	rrp12	99	64.798	ENSPMGG00000020217	rrp12	99	64.496	Periophthalmus_magnuspinnatus
ENSXETG00000003430	rrp12	99	67.127	ENSPEMG00000008437	Rrp12	99	67.283	Peromyscus_maniculatus_bairdii
ENSXETG00000003430	rrp12	83	55.529	ENSPMAG00000007493	rrp12	80	55.542	Petromyzon_marinus
ENSXETG00000003430	rrp12	96	74.295	ENSPCIG00000002157	RRP12	100	67.312	Phascolarctos_cinereus
ENSXETG00000003430	rrp12	99	65.523	ENSPFOG00000014975	rrp12	99	65.349	Poecilia_formosa
ENSXETG00000003430	rrp12	99	65.289	ENSPLAG00000009840	rrp12	99	65.116	Poecilia_latipinna
ENSXETG00000003430	rrp12	99	65.445	ENSPMEG00000021871	rrp12	99	65.271	Poecilia_mexicana
ENSXETG00000003430	rrp12	99	64.701	ENSPREG00000020950	rrp12	99	64.402	Poecilia_reticulata
ENSXETG00000003430	rrp12	99	66.513	ENSPPYG00000002528	RRP12	99	66.641	Pongo_abelii
ENSXETG00000003430	rrp12	94	78.090	ENSPCAG00000008967	RRP12	94	78.090	Procavia_capensis
ENSXETG00000003430	rrp12	99	67.772	ENSPCOG00000014009	RRP12	99	74.510	Propithecus_coquereli
ENSXETG00000003430	rrp12	99	64.154	ENSPVAG00000003370	RRP12	100	64.154	Pteropus_vampyrus
ENSXETG00000003430	rrp12	99	67.055	ENSPNYG00000009451	rrp12	99	66.873	Pundamilia_nyererei
ENSXETG00000003430	rrp12	99	64.341	ENSPNAG00000007658	rrp12	99	64.578	Pygocentrus_nattereri
ENSXETG00000003430	rrp12	99	67.643	ENSRNOG00000048495	Rrp12	99	67.643	Rattus_norvegicus
ENSXETG00000003430	rrp12	92	75.817	ENSRBIG00000021296	RRP12	99	75.817	Rhinopithecus_bieti
ENSXETG00000003430	rrp12	92	75.817	ENSRROG00000032482	RRP12	99	75.817	Rhinopithecus_roxellana
ENSXETG00000003430	rrp12	92	75.163	ENSSBOG00000030992	RRP12	99	75.163	Saimiri_boliviensis_boliviensis
ENSXETG00000003430	rrp12	99	67.620	ENSSHAG00000018275	RRP12	99	67.620	Sarcophilus_harrisii
ENSXETG00000003430	rrp12	100	65.763	ENSSFOG00015016400	rrp12	100	65.763	Scleropages_formosus
ENSXETG00000003430	rrp12	99	65.133	ENSSMAG00000004047	rrp12	99	65.143	Scophthalmus_maximus
ENSXETG00000003430	rrp12	99	65.630	ENSSDUG00000022871	rrp12	99	65.456	Seriola_dumerili
ENSXETG00000003430	rrp12	99	65.397	ENSSLDG00000003038	rrp12	99	65.224	Seriola_lalandi_dorsalis
ENSXETG00000003430	rrp12	99	65.301	ENSSPUG00000012221	RRP12	99	65.248	Sphenodon_punctatus
ENSXETG00000003430	rrp12	99	66.095	ENSSPAG00000002261	rrp12	99	66.023	Stegastes_partitus
ENSXETG00000003430	rrp12	99	67.360	ENSSSCG00000010514	RRP12	99	67.436	Sus_scrofa
ENSXETG00000003430	rrp12	88	63.628	ENSTGUG00000009711	RRP12	99	63.628	Taeniopygia_guttata
ENSXETG00000003430	rrp12	99	60.978	ENSTRUG00000012017	rrp12	99	61.318	Takifugu_rubripes
ENSXETG00000003430	rrp12	99	64.651	ENSTNIG00000016522	rrp12	99	64.638	Tetraodon_nigroviridis
ENSXETG00000003430	rrp12	77	78.537	ENSTBEG00000004907	RRP12	80	78.537	Tupaia_belangeri
ENSXETG00000003430	rrp12	99	64.561	ENSTTRG00000009878	RRP12	99	64.588	Tursiops_truncatus
ENSXETG00000003430	rrp12	99	67.002	ENSUAMG00000009092	RRP12	99	67.233	Ursus_americanus
ENSXETG00000003430	rrp12	99	65.560	ENSUMAG00000021621	RRP12	96	69.048	Ursus_maritimus
ENSXETG00000003430	rrp12	99	67.415	ENSVVUG00000023168	RRP12	99	67.724	Vulpes_vulpes
ENSXETG00000003430	rrp12	90	66.667	ENSXCOG00000012082	rrp12	99	66.695	Xiphophorus_couchianus
ENSXETG00000003430	rrp12	99	65.835	ENSXMAG00000013498	rrp12	99	65.659	Xiphophorus_maculatus