EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000003451 (Gene tree)
Gene ID: -
Gene Symbol: lsg1
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 15131 bases
Position: chrGL172955.1:1117797-1132927
Accession: XB-GENE-990730
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000007467	MMR_HSR1	PF01926.23	1.4e-15	1	1
ENSXETP00000059767	MMR_HSR1	PF01926.23	1.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000063929	-	1986	-	ENSXETP00000059767	645 (aa)	-	F6Q456
ENSXETT00000007467	-	1941	-	ENSXETP00000007467	631 (aa)	-	F6RQN1

Gene Model

Click here to download ENSXETG00000003451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000003451's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000003451	lsg1	99	66.206	ENSG00000041802	LSG1	98	74.713	Homo_sapiens
ENSXETG00000003451	lsg1	100	67.138	ENSAPOG00000009694	lsg1	100	67.130	Acanthochromis_polyacanthus
ENSXETG00000003451	lsg1	99	63.852	ENSAMEG00000009343	LSG1	99	64.521	Ailuropoda_melanoleuca
ENSXETG00000003451	lsg1	98	68.058	ENSACIG00000012406	lsg1	100	67.692	Amphilophus_citrinellus
ENSXETG00000003451	lsg1	100	66.772	ENSAOCG00000016066	lsg1	100	67.180	Amphiprion_ocellaris
ENSXETG00000003451	lsg1	100	67.087	ENSAPEG00000003252	lsg1	100	67.180	Amphiprion_percula
ENSXETG00000003451	lsg1	98	66.352	ENSATEG00000011794	lsg1	100	66.411	Anabas_testudineus
ENSXETG00000003451	lsg1	95	63.005	ENSACAG00000004222	LSG1	100	62.500	Anolis_carolinensis
ENSXETG00000003451	lsg1	99	66.974	ENSANAG00000021153	LSG1	99	66.917	Aotus_nancymaae
ENSXETG00000003451	lsg1	100	67.026	ENSACLG00000000520	lsg1	100	66.667	Astatotilapia_calliptera
ENSXETG00000003451	lsg1	100	66.770	ENSAMXG00000008271	lsg1	100	66.565	Astyanax_mexicanus
ENSXETG00000003451	lsg1	99	67.752	ENSBTAG00000008461	LSG1	99	67.527	Bos_taurus
ENSXETG00000003451	lsg1	73	52.821	WBGene00016907	C53H9.2	89	52.821	Caenorhabditis_elegans
ENSXETG00000003451	lsg1	99	66.820	ENSCJAG00000013962	LSG1	99	66.767	Callithrix_jacchus
ENSXETG00000003451	lsg1	95	64.771	ENSCAFG00000013445	LSG1	100	64.780	Canis_familiaris
ENSXETG00000003451	lsg1	99	64.188	ENSCAFG00020002216	LSG1	99	64.547	Canis_lupus_dingo
ENSXETG00000003451	lsg1	100	68.085	ENSCHIG00000015769	LSG1	100	67.325	Capra_hircus
ENSXETG00000003451	lsg1	99	65.644	ENSTSYG00000001447	LSG1	99	65.766	Carlito_syrichta
ENSXETG00000003451	lsg1	95	66.225	ENSCAPG00000009856	LSG1	99	65.640	Cavia_aperea
ENSXETG00000003451	lsg1	99	66.513	ENSCCAG00000035744	LSG1	99	66.316	Cebus_capucinus
ENSXETG00000003451	lsg1	99	66.052	ENSCATG00000042060	LSG1	99	64.662	Cercocebus_atys
ENSXETG00000003451	lsg1	99	66.052	ENSCSAG00000008796	LSG1	92	66.015	Chlorocebus_sabaeus
ENSXETG00000003451	lsg1	100	69.832	ENSCPBG00000015941	LSG1	83	68.816	Chrysemys_picta_bellii
ENSXETG00000003451	lsg1	71	59.799	ENSCING00000007079	-	94	59.799	Ciona_intestinalis
ENSXETG00000003451	lsg1	80	55.645	ENSCSAVG00000002514	-	97	55.645	Ciona_savignyi
ENSXETG00000003451	lsg1	99	65.745	ENSCANG00000030709	LSG1	99	65.714	Colobus_angolensis_palliatus
ENSXETG00000003451	lsg1	99	65.835	ENSCGRG00001019846	Lsg1	99	65.846	Cricetulus_griseus_chok1gshd
ENSXETG00000003451	lsg1	99	64.977	ENSCGRG00000014617	Lsg1	99	65.303	Cricetulus_griseus_crigri
ENSXETG00000003451	lsg1	98	66.351	ENSCSEG00000008522	lsg1	100	65.706	Cynoglossus_semilaevis
ENSXETG00000003451	lsg1	98	66.559	ENSCVAG00000002484	lsg1	100	66.975	Cyprinodon_variegatus
ENSXETG00000003451	lsg1	100	67.020	ENSDARG00000015352	lsg1	100	67.474	Danio_rerio
ENSXETG00000003451	lsg1	99	65.745	ENSDNOG00000006224	LSG1	99	65.211	Dasypus_novemcinctus
ENSXETG00000003451	lsg1	100	47.826	FBgn0266284	Ns3	99	48.397	Drosophila_melanogaster
ENSXETG00000003451	lsg1	88	74.667	ENSETEG00000003888	LSG1	89	74.667	Echinops_telfairi
ENSXETG00000003451	lsg1	89	54.958	ENSEBUG00000003119	lsg1	85	55.369	Eptatretus_burgeri
ENSXETG00000003451	lsg1	99	64.931	ENSEASG00005000678	LSG1	99	64.970	Equus_asinus_asinus
ENSXETG00000003451	lsg1	99	65.544	ENSECAG00000017659	LSG1	99	65.569	Equus_caballus
ENSXETG00000003451	lsg1	86	64.486	ENSEEUG00000015217	LSG1	87	64.957	Erinaceus_europaeus
ENSXETG00000003451	lsg1	100	64.615	ENSELUG00000023973	lsg1	100	64.308	Esox_lucius
ENSXETG00000003451	lsg1	100	64.741	ENSFCAG00000024957	LSG1	100	64.741	Felis_catus
ENSXETG00000003451	lsg1	93	65.074	ENSFALG00000007210	LSG1	94	64.412	Ficedula_albicollis
ENSXETG00000003451	lsg1	99	64.142	ENSFDAG00000017373	LSG1	99	64.977	Fukomys_damarensis
ENSXETG00000003451	lsg1	98	66.132	ENSFHEG00000003680	lsg1	100	65.649	Fundulus_heteroclitus
ENSXETG00000003451	lsg1	87	72.047	ENSGMOG00000015834	lsg1	89	71.269	Gadus_morhua
ENSXETG00000003451	lsg1	100	63.126	ENSGALG00000007058	LSG1	87	62.481	Gallus_gallus
ENSXETG00000003451	lsg1	98	66.129	ENSGAFG00000015831	lsg1	100	65.842	Gambusia_affinis
ENSXETG00000003451	lsg1	98	66.348	ENSGACG00000009323	lsg1	100	65.749	Gasterosteus_aculeatus
ENSXETG00000003451	lsg1	99	65.899	ENSGGOG00000000520	LSG1	99	65.865	Gorilla_gorilla
ENSXETG00000003451	lsg1	100	67.328	ENSHBUG00000005659	lsg1	100	67.023	Haplochromis_burtoni
ENSXETG00000003451	lsg1	99	64.386	ENSHGLG00000017390	LSG1	99	63.914	Heterocephalus_glaber_female
ENSXETG00000003451	lsg1	99	64.386	ENSHGLG00100018587	LSG1	99	63.914	Heterocephalus_glaber_male
ENSXETG00000003451	lsg1	98	65.335	ENSHCOG00000016848	lsg1	100	64.634	Hippocampus_comes
ENSXETG00000003451	lsg1	100	65.745	ENSIPUG00000008631	lsg1	100	66.003	Ictalurus_punctatus
ENSXETG00000003451	lsg1	76	59.961	ENSSTOG00000010234	LSG1	92	60.158	Ictidomys_tridecemlineatus
ENSXETG00000003451	lsg1	99	67.138	ENSJJAG00000015513	Lsg1	99	66.872	Jaculus_jaculus
ENSXETG00000003451	lsg1	98	64.000	ENSKMAG00000009681	lsg1	100	64.606	Kryptolebias_marmoratus
ENSXETG00000003451	lsg1	98	66.399	ENSLBEG00000024261	lsg1	100	65.948	Labrus_bergylta
ENSXETG00000003451	lsg1	100	67.899	ENSLACG00000013399	LSG1	100	67.612	Latimeria_chalumnae
ENSXETG00000003451	lsg1	98	68.634	ENSLOCG00000004918	lsg1	100	67.417	Lepisosteus_oculatus
ENSXETG00000003451	lsg1	99	65.758	ENSLAFG00000012919	-	99	65.507	Loxodonta_africana
ENSXETG00000003451	lsg1	99	65.745	ENSMFAG00000039903	LSG1	99	64.361	Macaca_fascicularis
ENSXETG00000003451	lsg1	99	65.899	ENSMMUG00000010708	LSG1	99	65.865	Macaca_mulatta
ENSXETG00000003451	lsg1	99	65.899	ENSMNEG00000031538	LSG1	99	64.662	Macaca_nemestrina
ENSXETG00000003451	lsg1	99	65.899	ENSMLEG00000041184	LSG1	99	65.865	Mandrillus_leucophaeus
ENSXETG00000003451	lsg1	100	67.347	ENSMAMG00000000470	lsg1	100	66.974	Mastacembelus_armatus
ENSXETG00000003451	lsg1	100	67.328	ENSMZEG00005017865	lsg1	100	67.023	Maylandia_zebra
ENSXETG00000003451	lsg1	89	63.932	ENSMGAG00000007050	LSG1	99	63.866	Meleagris_gallopavo
ENSXETG00000003451	lsg1	97	62.205	ENSMAUG00000016976	Lsg1	97	62.440	Mesocricetus_auratus
ENSXETG00000003451	lsg1	99	65.331	ENSMICG00000049087	LSG1	99	65.158	Microcebus_murinus
ENSXETG00000003451	lsg1	99	65.070	ENSMOCG00000022136	Lsg1	99	66.012	Microtus_ochrogaster
ENSXETG00000003451	lsg1	98	59.655	ENSMMOG00000008884	lsg1	100	72.119	Mola_mola
ENSXETG00000003451	lsg1	99	56.753	ENSMODG00000019828	LSG1	99	56.364	Monodelphis_domestica
ENSXETG00000003451	lsg1	100	66.058	MGP_CAROLIEiJ_G0020648	Lsg1	100	66.159	Mus_caroli
ENSXETG00000003451	lsg1	100	65.559	ENSMUSG00000022538	Lsg1	100	66.156	Mus_musculus
ENSXETG00000003451	lsg1	99	66.000	MGP_PahariEiJ_G0016352	Lsg1	100	65.408	Mus_pahari
ENSXETG00000003451	lsg1	100	66.212	MGP_SPRETEiJ_G0021544	Lsg1	100	66.003	Mus_spretus
ENSXETG00000003451	lsg1	100	64.232	ENSMPUG00000003734	LSG1	100	64.382	Mustela_putorius_furo
ENSXETG00000003451	lsg1	100	67.372	ENSMLUG00000012548	LSG1	100	66.667	Myotis_lucifugus
ENSXETG00000003451	lsg1	99	66.460	ENSNGAG00000021872	Lsg1	99	65.350	Nannospalax_galili
ENSXETG00000003451	lsg1	99	66.052	ENSNLEG00000008293	LSG1	99	65.865	Nomascus_leucogenys
ENSXETG00000003451	lsg1	69	70.103	ENSMEUG00000009041	-	82	70.103	Notamacropus_eugenii
ENSXETG00000003451	lsg1	100	67.077	ENSONIG00000002635	lsg1	100	66.514	Oreochromis_niloticus
ENSXETG00000003451	lsg1	95	68.921	ENSOANG00000012742	LSG1	99	67.398	Ornithorhynchus_anatinus
ENSXETG00000003451	lsg1	99	65.244	ENSOCUG00000004817	LSG1	99	65.165	Oryctolagus_cuniculus
ENSXETG00000003451	lsg1	98	66.935	ENSORLG00000007695	lsg1	100	66.461	Oryzias_latipes
ENSXETG00000003451	lsg1	98	66.559	ENSORLG00020016286	lsg1	100	65.948	Oryzias_latipes_hni
ENSXETG00000003451	lsg1	98	67.419	ENSORLG00015012025	lsg1	100	66.461	Oryzias_latipes_hsok
ENSXETG00000003451	lsg1	98	66.935	ENSOMEG00000022379	lsg1	100	66.151	Oryzias_melastigma
ENSXETG00000003451	lsg1	99	65.850	ENSOGAG00000003475	LSG1	99	65.667	Otolemur_garnettii
ENSXETG00000003451	lsg1	100	67.273	ENSOARG00000020403	LSG1	100	67.273	Ovis_aries
ENSXETG00000003451	lsg1	99	66.820	ENSPPAG00000029271	LSG1	99	65.865	Pan_paniscus
ENSXETG00000003451	lsg1	100	65.492	ENSPPRG00000010281	LSG1	100	65.140	Panthera_pardus
ENSXETG00000003451	lsg1	100	65.243	ENSPTIG00000010789	LSG1	100	64.889	Panthera_tigris_altaica
ENSXETG00000003451	lsg1	99	66.820	ENSPTRG00000015760	LSG1	99	65.865	Pan_troglodytes
ENSXETG00000003451	lsg1	99	65.745	ENSPANG00000018249	LSG1	99	64.361	Papio_anubis
ENSXETG00000003451	lsg1	100	65.204	ENSPKIG00000002895	lsg1	99	66.144	Paramormyrops_kingsleyae
ENSXETG00000003451	lsg1	95	65.920	ENSPSIG00000009821	LSG1	99	64.577	Pelodiscus_sinensis
ENSXETG00000003451	lsg1	95	68.099	ENSPMGG00000000931	lsg1	100	67.317	Periophthalmus_magnuspinnatus
ENSXETG00000003451	lsg1	99	66.769	ENSPEMG00000012082	-	99	66.867	Peromyscus_maniculatus_bairdii
ENSXETG00000003451	lsg1	100	59.970	ENSPMAG00000007451	lsg1	99	60.090	Petromyzon_marinus
ENSXETG00000003451	lsg1	98	66.667	ENSPCIG00000013890	LSG1	81	66.129	Phascolarctos_cinereus
ENSXETG00000003451	lsg1	98	66.343	ENSPFOG00000021882	lsg1	100	66.206	Poecilia_formosa
ENSXETG00000003451	lsg1	98	65.534	ENSPLAG00000019536	lsg1	100	65.284	Poecilia_latipinna
ENSXETG00000003451	lsg1	98	65.323	ENSPMEG00000017281	lsg1	100	65.237	Poecilia_mexicana
ENSXETG00000003451	lsg1	98	55.538	ENSPREG00000006048	lsg1	100	55.690	Poecilia_reticulata
ENSXETG00000003451	lsg1	93	65.625	ENSPPYG00000014425	LSG1	100	65.132	Pongo_abelii
ENSXETG00000003451	lsg1	89	73.333	ENSPCAG00000005511	LSG1	70	81.132	Procavia_capensis
ENSXETG00000003451	lsg1	99	64.571	ENSPCOG00000012360	LSG1	99	64.715	Propithecus_coquereli
ENSXETG00000003451	lsg1	100	66.872	ENSPNYG00000021994	lsg1	100	66.516	Pundamilia_nyererei
ENSXETG00000003451	lsg1	100	67.073	ENSPNAG00000015533	lsg1	100	67.123	Pygocentrus_nattereri
ENSXETG00000003451	lsg1	100	64.925	ENSRNOG00000001727	Lsg1	100	64.925	Rattus_norvegicus
ENSXETG00000003451	lsg1	99	65.692	ENSRBIG00000029053	LSG1	99	65.663	Rhinopithecus_bieti
ENSXETG00000003451	lsg1	99	65.692	ENSRROG00000037702	LSG1	99	65.663	Rhinopithecus_roxellana
ENSXETG00000003451	lsg1	85	40.072	YGL099W	LSG1	72	48.357	Saccharomyces_cerevisiae
ENSXETG00000003451	lsg1	99	66.667	ENSSBOG00000034938	LSG1	99	66.617	Saimiri_boliviensis_boliviensis
ENSXETG00000003451	lsg1	78	62.808	ENSSHAG00000003487	LSG1	100	61.860	Sarcophilus_harrisii
ENSXETG00000003451	lsg1	98	64.724	ENSSFOG00015008955	lsg1	100	64.778	Scleropages_formosus
ENSXETG00000003451	lsg1	98	66.872	ENSSDUG00000004622	lsg1	100	66.515	Seriola_dumerili
ENSXETG00000003451	lsg1	98	68.232	ENSSLDG00000010869	lsg1	100	68.558	Seriola_lalandi_dorsalis
ENSXETG00000003451	lsg1	82	68.047	ENSSARG00000012981	LSG1	81	67.139	Sorex_araneus
ENSXETG00000003451	lsg1	100	67.620	ENSSPUG00000016347	LSG1	100	66.566	Sphenodon_punctatus
ENSXETG00000003451	lsg1	100	67.138	ENSSPAG00000005508	lsg1	100	66.154	Stegastes_partitus
ENSXETG00000003451	lsg1	99	66.667	ENSSSCG00000011827	LSG1	99	66.411	Sus_scrofa
ENSXETG00000003451	lsg1	89	63.819	ENSTGUG00000009068	LSG1	100	63.819	Taeniopygia_guttata
ENSXETG00000003451	lsg1	98	61.732	ENSTRUG00000017380	lsg1	100	63.037	Takifugu_rubripes
ENSXETG00000003451	lsg1	98	65.600	ENSTNIG00000015570	lsg1	100	65.749	Tetraodon_nigroviridis
ENSXETG00000003451	lsg1	100	62.236	ENSTTRG00000000559	LSG1	100	61.725	Tursiops_truncatus
ENSXETG00000003451	lsg1	100	64.201	ENSUAMG00000012454	LSG1	99	65.269	Ursus_americanus
ENSXETG00000003451	lsg1	100	64.201	ENSUMAG00000000855	LSG1	99	65.269	Ursus_maritimus
ENSXETG00000003451	lsg1	95	63.505	ENSVPAG00000012400	LSG1	99	62.893	Vicugna_pacos
ENSXETG00000003451	lsg1	95	64.537	ENSVVUG00000008956	LSG1	97	63.880	Vulpes_vulpes
ENSXETG00000003451	lsg1	98	66.023	ENSXCOG00000003239	lsg1	100	65.745	Xiphophorus_couchianus
ENSXETG00000003451	lsg1	98	65.590	ENSXMAG00000005536	lsg1	100	65.177	Xiphophorus_maculatus