EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000003726 (Gene tree)
Gene ID: -
Gene Symbol: hbs1l
Alias: -
Full Name: Xenopus tropicalis HBS1 like translational GTPase (hbs1l)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 60986 bases
Position: chrGL172808.1:964515-1025500
Accession: NM_001130349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000008062	GTP_EFTU	PF00009.27	3.4e-46	1	1
ENSXETP00000058361	GTP_EFTU	PF00009.27	7.1e-11	1	1
ENSXETP00000008062	GTP_EFTU_D3	PF03143.17	2.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000008062	-	2753	XM_012962789	ENSXETP00000008062	677 (aa)	XP_012818243	F6UHP7
ENSXETT00000065900	-	3196	-	ENSXETP00000058361	327 (aa)	-	F6REI8

Gene Model

Click here to download ENSXETG00000003726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000003726's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000003726	hbs1l	62	38.444	ENSXETG00000001182	eef1a1	94	38.444
ENSXETG00000003726	hbs1l	63	38.182	ENSXETG00000019567	eef1a2	94	38.182
ENSXETG00000003726	hbs1l	63	37.813	ENSXETG00000017744	42Sp50	94	37.900
ENSXETG00000003726	hbs1l	63	38.621	ENSXETG00000005540	gspt1	90	35.283
ENSXETG00000003726	hbs1l	62	39.631	ENSXETG00000022604	eef1a1o	93	39.631

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000003726	hbs1l	100	75.620	ENSG00000112339	HBS1L	100	81.346	Homo_sapiens
ENSXETG00000003726	hbs1l	81	86.595	ENSAPOG00000013169	hbs1l	91	86.595	Acanthochromis_polyacanthus
ENSXETG00000003726	hbs1l	99	75.181	ENSAMEG00000009749	HBS1L	99	75.000	Ailuropoda_melanoleuca
ENSXETG00000003726	hbs1l	79	79.550	ENSACIG00000017087	hbs1l	91	79.550	Amphilophus_citrinellus
ENSXETG00000003726	hbs1l	100	70.875	ENSAPEG00000008320	hbs1l	100	70.301	Amphiprion_percula
ENSXETG00000003726	hbs1l	100	72.638	ENSATEG00000004459	hbs1l	100	72.638	Anabas_testudineus
ENSXETG00000003726	hbs1l	98	73.746	ENSAPLG00000007791	HBS1L	99	73.661	Anas_platyrhynchos
ENSXETG00000003726	hbs1l	100	75.581	ENSACAG00000010120	HBS1L	100	75.581	Anolis_carolinensis
ENSXETG00000003726	hbs1l	100	75.802	ENSANAG00000038076	HBS1L	95	83.673	Aotus_nancymaae
ENSXETG00000003726	hbs1l	100	71.674	ENSACLG00000010469	hbs1l	100	71.674	Astatotilapia_calliptera
ENSXETG00000003726	hbs1l	100	73.043	ENSAMXG00000004260	hbs1l	97	79.065	Astyanax_mexicanus
ENSXETG00000003726	hbs1l	100	75.436	ENSBTAG00000020174	HBS1L	100	75.510	Bos_taurus
ENSXETG00000003726	hbs1l	69	45.877	WBGene00010622	K07A12.4	79	45.877	Caenorhabditis_elegans
ENSXETG00000003726	hbs1l	100	75.510	ENSCJAG00000007678	HBS1L	94	83.673	Callithrix_jacchus
ENSXETG00000003726	hbs1l	100	74.344	ENSCAFG00000000226	HBS1L	100	74.344	Canis_familiaris
ENSXETG00000003726	hbs1l	100	74.344	ENSCAFG00020021904	HBS1L	100	74.344	Canis_lupus_dingo
ENSXETG00000003726	hbs1l	100	75.291	ENSCHIG00000010299	HBS1L	100	75.364	Capra_hircus
ENSXETG00000003726	hbs1l	100	75.219	ENSTSYG00000007089	HBS1L	100	85.106	Carlito_syrichta
ENSXETG00000003726	hbs1l	99	64.602	ENSCPOG00000007015	HBS1L	99	64.402	Cavia_porcellus
ENSXETG00000003726	hbs1l	100	74.344	ENSCCAG00000033863	HBS1L	100	76.421	Cebus_capucinus
ENSXETG00000003726	hbs1l	100	75.474	ENSCATG00000043042	HBS1L	93	83.673	Cercocebus_atys
ENSXETG00000003726	hbs1l	100	73.362	ENSCLAG00000004937	HBS1L	100	73.285	Chinchilla_lanigera
ENSXETG00000003726	hbs1l	100	75.073	ENSCSAG00000016791	HBS1L	100	74.781	Chlorocebus_sabaeus
ENSXETG00000003726	hbs1l	97	59.549	ENSCHOG00000001852	HBS1L	99	59.394	Choloepus_hoffmanni
ENSXETG00000003726	hbs1l	100	76.052	ENSCPBG00000017635	HBS1L	100	76.052	Chrysemys_picta_bellii
ENSXETG00000003726	hbs1l	99	47.772	ENSCING00000005592	-	99	47.214	Ciona_intestinalis
ENSXETG00000003726	hbs1l	99	47.869	ENSCSAVG00000002297	-	99	58.407	Ciona_savignyi
ENSXETG00000003726	hbs1l	100	75.255	ENSCANG00000031208	HBS1L	93	83.673	Colobus_angolensis_palliatus
ENSXETG00000003726	hbs1l	100	74.891	ENSCGRG00001024531	Hbs1l	100	73.496	Cricetulus_griseus_chok1gshd
ENSXETG00000003726	hbs1l	100	74.891	ENSCGRG00000017361	Hbs1l	100	73.496	Cricetulus_griseus_crigri
ENSXETG00000003726	hbs1l	99	71.977	ENSCSEG00000002794	hbs1l	94	71.977	Cynoglossus_semilaevis
ENSXETG00000003726	hbs1l	100	70.513	ENSCVAG00000001462	hbs1l	100	70.513	Cyprinodon_variegatus
ENSXETG00000003726	hbs1l	100	71.717	ENSDARG00000036778	hbs1l	100	71.717	Danio_rerio
ENSXETG00000003726	hbs1l	100	74.781	ENSDORG00000005958	Hbs1l	100	74.344	Dipodomys_ordii
ENSXETG00000003726	hbs1l	99	47.557	FBgn0042712	HBS1	100	47.270	Drosophila_melanogaster
ENSXETG00000003726	hbs1l	100	69.971	ENSETEG00000000913	HBS1L	100	69.971	Echinops_telfairi
ENSXETG00000003726	hbs1l	99	58.003	ENSEBUG00000010759	hbs1l	100	63.926	Eptatretus_burgeri
ENSXETG00000003726	hbs1l	100	74.564	ENSEASG00005011148	HBS1L	100	74.381	Equus_asinus_asinus
ENSXETG00000003726	hbs1l	100	74.564	ENSECAG00000004470	HBS1L	100	74.381	Equus_caballus
ENSXETG00000003726	hbs1l	100	70.520	ENSEEUG00000013582	HBS1L	100	70.231	Erinaceus_europaeus
ENSXETG00000003726	hbs1l	77	90.476	ENSELUG00000006444	hbs1l	90	90.476	Esox_lucius
ENSXETG00000003726	hbs1l	100	74.964	ENSFCAG00000001810	HBS1L	100	80.806	Felis_catus
ENSXETG00000003726	hbs1l	87	76.628	ENSFALG00000011898	HBS1L	100	76.628	Ficedula_albicollis
ENSXETG00000003726	hbs1l	100	74.419	ENSFDAG00000011841	HBS1L	100	74.344	Fukomys_damarensis
ENSXETG00000003726	hbs1l	100	70.085	ENSFHEG00000006942	hbs1l	100	70.085	Fundulus_heteroclitus
ENSXETG00000003726	hbs1l	99	70.882	ENSGMOG00000011843	hbs1l	100	70.882	Gadus_morhua
ENSXETG00000003726	hbs1l	100	73.730	ENSGALG00000013962	HBS1L	100	73.730	Gallus_gallus
ENSXETG00000003726	hbs1l	100	70.042	ENSGAFG00000004157	hbs1l	100	69.565	Gambusia_affinis
ENSXETG00000003726	hbs1l	99	72.198	ENSGACG00000011035	hbs1l	100	71.616	Gasterosteus_aculeatus
ENSXETG00000003726	hbs1l	100	75.507	ENSGAGG00000002033	HBS1L	100	75.072	Gopherus_agassizii
ENSXETG00000003726	hbs1l	82	74.240	ENSGGOG00000034956	-	93	84.409	Gorilla_gorilla
ENSXETG00000003726	hbs1l	100	71.817	ENSHBUG00000013424	hbs1l	100	71.817	Haplochromis_burtoni
ENSXETG00000003726	hbs1l	100	74.527	ENSHGLG00000000516	HBS1L	100	74.273	Heterocephalus_glaber_female
ENSXETG00000003726	hbs1l	100	74.527	ENSHGLG00100003550	HBS1L	100	74.273	Heterocephalus_glaber_male
ENSXETG00000003726	hbs1l	100	69.684	ENSHCOG00000007581	hbs1l	93	69.496	Hippocampus_comes
ENSXETG00000003726	hbs1l	100	73.314	ENSIPUG00000010748	hbs1l	100	73.314	Ictalurus_punctatus
ENSXETG00000003726	hbs1l	100	75.072	ENSSTOG00000007551	HBS1L	100	74.964	Ictidomys_tridecemlineatus
ENSXETG00000003726	hbs1l	100	59.334	ENSJJAG00000012660	-	100	58.466	Jaculus_jaculus
ENSXETG00000003726	hbs1l	99	72.926	ENSJJAG00000017024	-	97	72.198	Jaculus_jaculus
ENSXETG00000003726	hbs1l	100	71.817	ENSKMAG00000012130	hbs1l	100	71.245	Kryptolebias_marmoratus
ENSXETG00000003726	hbs1l	100	71.266	ENSLBEG00000002784	hbs1l	98	81.250	Labrus_bergylta
ENSXETG00000003726	hbs1l	71	78.367	ENSLACG00000004528	HBS1L	99	78.367	Latimeria_chalumnae
ENSXETG00000003726	hbs1l	100	75.044	ENSLOCG00000016221	hbs1l	100	70.804	Lepisosteus_oculatus
ENSXETG00000003726	hbs1l	100	72.780	ENSLAFG00000007835	HBS1L	100	72.780	Loxodonta_africana
ENSXETG00000003726	hbs1l	100	75.474	ENSMFAG00000003766	HBS1L	100	75.182	Macaca_fascicularis
ENSXETG00000003726	hbs1l	91	79.705	ENSMMUG00000004802	HBS1L	95	83.673	Macaca_mulatta
ENSXETG00000003726	hbs1l	100	75.474	ENSMNEG00000043942	HBS1L	100	75.182	Macaca_nemestrina
ENSXETG00000003726	hbs1l	99	75.220	ENSMLEG00000043218	HBS1L	93	83.673	Mandrillus_leucophaeus
ENSXETG00000003726	hbs1l	100	71.489	ENSMAMG00000016498	hbs1l	91	81.489	Mastacembelus_armatus
ENSXETG00000003726	hbs1l	100	71.674	ENSMZEG00005015575	hbs1l	100	71.674	Maylandia_zebra
ENSXETG00000003726	hbs1l	79	79.737	ENSMZEG00005024018	-	90	79.737	Maylandia_zebra
ENSXETG00000003726	hbs1l	99	73.206	ENSMGAG00000013065	HBS1L	97	73.653	Meleagris_gallopavo
ENSXETG00000003726	hbs1l	100	74.746	ENSMAUG00000001077	Hbs1l	100	73.988	Mesocricetus_auratus
ENSXETG00000003726	hbs1l	99	71.930	ENSMICG00000001533	-	99	71.930	Microcebus_murinus
ENSXETG00000003726	hbs1l	100	64.928	ENSMICG00000030043	-	96	82.796	Microcebus_murinus
ENSXETG00000003726	hbs1l	100	74.891	ENSMOCG00000023038	Hbs1l	100	74.133	Microtus_ochrogaster
ENSXETG00000003726	hbs1l	97	72.104	ENSMMOG00000015507	hbs1l	99	72.104	Mola_mola
ENSXETG00000003726	hbs1l	100	74.381	ENSMODG00000017499	HBS1L	100	74.381	Monodelphis_domestica
ENSXETG00000003726	hbs1l	100	71.246	ENSMALG00000010768	hbs1l	97	84.091	Monopterus_albus
ENSXETG00000003726	hbs1l	100	73.844	MGP_CAROLIEiJ_G0015162	Hbs1l	100	73.654	Mus_caroli
ENSXETG00000003726	hbs1l	100	73.517	ENSMUSG00000019977	Hbs1l	100	93.548	Mus_musculus
ENSXETG00000003726	hbs1l	100	72.214	MGP_PahariEiJ_G0023782	Hbs1l	100	72.052	Mus_pahari
ENSXETG00000003726	hbs1l	100	73.517	MGP_SPRETEiJ_G0015970	Hbs1l	100	73.362	Mus_spretus
ENSXETG00000003726	hbs1l	100	75.255	ENSMPUG00000014810	HBS1L	100	74.927	Mustela_putorius_furo
ENSXETG00000003726	hbs1l	100	74.891	ENSMLUG00000010618	HBS1L	100	74.381	Myotis_lucifugus
ENSXETG00000003726	hbs1l	100	74.165	ENSNGAG00000015184	Hbs1l	100	73.945	Nannospalax_galili
ENSXETG00000003726	hbs1l	88	84.444	ENSNBRG00000020095	hbs1l	96	84.444	Neolamprologus_brichardi
ENSXETG00000003726	hbs1l	100	75.182	ENSNLEG00000014721	HBS1L	95	83.673	Nomascus_leucogenys
ENSXETG00000003726	hbs1l	81	82.741	ENSMEUG00000003907	HBS1L	81	82.741	Notamacropus_eugenii
ENSXETG00000003726	hbs1l	77	82.645	ENSOPRG00000013595	HBS1L	72	82.645	Ochotona_princeps
ENSXETG00000003726	hbs1l	99	73.977	ENSODEG00000008959	HBS1L	99	73.837	Octodon_degus
ENSXETG00000003726	hbs1l	100	71.817	ENSONIG00000000460	hbs1l	100	71.266	Oreochromis_niloticus
ENSXETG00000003726	hbs1l	99	74.453	ENSOANG00000002684	-	99	74.378	Ornithorhynchus_anatinus
ENSXETG00000003726	hbs1l	100	71.053	ENSOCUG00000011619	HBS1L	99	72.968	Oryctolagus_cuniculus
ENSXETG00000003726	hbs1l	100	69.633	ENSORLG00000016559	hbs1l	100	68.883	Oryzias_latipes
ENSXETG00000003726	hbs1l	100	68.741	ENSORLG00020003827	hbs1l	100	68.741	Oryzias_latipes_hni
ENSXETG00000003726	hbs1l	100	68.458	ENSORLG00015023105	hbs1l	100	68.458	Oryzias_latipes_hsok
ENSXETG00000003726	hbs1l	100	71.000	ENSOMEG00000016715	hbs1l	100	70.286	Oryzias_melastigma
ENSXETG00000003726	hbs1l	100	75.762	ENSOGAG00000012604	HBS1L	100	75.255	Otolemur_garnettii
ENSXETG00000003726	hbs1l	100	75.145	ENSOARG00000005671	-	100	75.219	Ovis_aries
ENSXETG00000003726	hbs1l	99	75.510	ENSOARG00000014798	-	99	75.585	Ovis_aries
ENSXETG00000003726	hbs1l	100	75.766	ENSPPAG00000029900	HBS1L	93	83.673	Pan_paniscus
ENSXETG00000003726	hbs1l	100	74.964	ENSPPRG00000005285	HBS1L	95	82.000	Panthera_pardus
ENSXETG00000003726	hbs1l	100	74.964	ENSPTIG00000015803	HBS1L	95	82.000	Panthera_tigris_altaica
ENSXETG00000003726	hbs1l	100	75.766	ENSPTRG00000018630	HBS1L	93	83.673	Pan_troglodytes
ENSXETG00000003726	hbs1l	100	75.474	ENSPANG00000007075	HBS1L	93	83.673	Papio_anubis
ENSXETG00000003726	hbs1l	100	71.283	ENSPKIG00000023171	hbs1l	100	71.283	Paramormyrops_kingsleyae
ENSXETG00000003726	hbs1l	86	72.712	ENSPSIG00000016467	HBS1L	95	72.603	Pelodiscus_sinensis
ENSXETG00000003726	hbs1l	99	71.111	ENSPMGG00000018051	hbs1l	96	83.511	Periophthalmus_magnuspinnatus
ENSXETG00000003726	hbs1l	100	74.165	ENSPEMG00000014369	Hbs1l	100	73.410	Peromyscus_maniculatus_bairdii
ENSXETG00000003726	hbs1l	100	66.038	ENSPMAG00000002516	hbs1l	100	65.022	Petromyzon_marinus
ENSXETG00000003726	hbs1l	100	70.183	ENSPFOG00000021764	hbs1l	100	68.724	Poecilia_formosa
ENSXETG00000003726	hbs1l	100	70.522	ENSPLAG00000006193	hbs1l	100	69.339	Poecilia_latipinna
ENSXETG00000003726	hbs1l	100	69.817	ENSPMEG00000000925	hbs1l	100	69.339	Poecilia_mexicana
ENSXETG00000003726	hbs1l	100	69.943	ENSPREG00000011270	hbs1l	100	69.943	Poecilia_reticulata
ENSXETG00000003726	hbs1l	100	74.891	ENSPPYG00000017027	HBS1L	100	74.599	Pongo_abelii
ENSXETG00000003726	hbs1l	90	80.224	ENSPCAG00000007002	HBS1L	78	80.224	Procavia_capensis
ENSXETG00000003726	hbs1l	83	77.947	ENSPVAG00000015229	HBS1L	80	77.383	Pteropus_vampyrus
ENSXETG00000003726	hbs1l	100	71.674	ENSPNYG00000013360	hbs1l	100	71.674	Pundamilia_nyererei
ENSXETG00000003726	hbs1l	100	73.737	ENSPNAG00000026721	hbs1l	100	73.737	Pygocentrus_nattereri
ENSXETG00000003726	hbs1l	100	73.266	ENSRNOG00000014531	Hbs1l	100	72.688	Rattus_norvegicus
ENSXETG00000003726	hbs1l	100	75.400	ENSRBIG00000004484	HBS1L	100	75.036	Rhinopithecus_bieti
ENSXETG00000003726	hbs1l	100	75.255	ENSRROG00000026176	HBS1L	100	74.891	Rhinopithecus_roxellana
ENSXETG00000003726	hbs1l	63	38.565	YKR084C	-	73	38.565	Saccharomyces_cerevisiae
ENSXETG00000003726	hbs1l	100	75.802	ENSSBOG00000019696	-	95	82.000	Saimiri_boliviensis_boliviensis
ENSXETG00000003726	hbs1l	100	67.733	ENSSBOG00000016930	-	98	80.319	Saimiri_boliviensis_boliviensis
ENSXETG00000003726	hbs1l	100	76.087	ENSSHAG00000013509	HBS1L	100	76.093	Sarcophilus_harrisii
ENSXETG00000003726	hbs1l	99	71.616	ENSSFOG00015017544	hbs1l	96	71.616	Scleropages_formosus
ENSXETG00000003726	hbs1l	100	70.143	ENSSMAG00000010621	hbs1l	100	69.429	Scophthalmus_maximus
ENSXETG00000003726	hbs1l	100	70.982	ENSSDUG00000012974	hbs1l	100	71.124	Seriola_dumerili
ENSXETG00000003726	hbs1l	100	71.124	ENSSLDG00000004960	hbs1l	97	79.592	Seriola_lalandi_dorsalis
ENSXETG00000003726	hbs1l	98	74.554	ENSSARG00000006747	HBS1L	99	73.913	Sorex_araneus
ENSXETG00000003726	hbs1l	99	74.453	ENSSPUG00000012389	HBS1L	99	74.453	Sphenodon_punctatus
ENSXETG00000003726	hbs1l	97	74.963	ENSSSCG00000004169	HBS1L	100	74.331	Sus_scrofa
ENSXETG00000003726	hbs1l	99	74.818	ENSTGUG00000011507	HBS1L	99	74.818	Taeniopygia_guttata
ENSXETG00000003726	hbs1l	99	70.707	ENSTRUG00000016128	hbs1l	89	83.784	Takifugu_rubripes
ENSXETG00000003726	hbs1l	99	72.182	ENSTNIG00000016320	hbs1l	99	72.182	Tetraodon_nigroviridis
ENSXETG00000003726	hbs1l	100	69.693	ENSTBEG00000009950	HBS1L	100	69.693	Tupaia_belangeri
ENSXETG00000003726	hbs1l	99	74.527	ENSTTRG00000003715	HBS1L	99	74.161	Tursiops_truncatus
ENSXETG00000003726	hbs1l	100	75.398	ENSUAMG00000001064	HBS1L	100	75.219	Ursus_americanus
ENSXETG00000003726	hbs1l	100	75.253	ENSUMAG00000024395	HBS1L	100	79.266	Ursus_maritimus
ENSXETG00000003726	hbs1l	89	79.851	ENSVPAG00000006280	HBS1L	85	81.633	Vicugna_pacos
ENSXETG00000003726	hbs1l	100	74.490	ENSVVUG00000000295	HBS1L	100	74.490	Vulpes_vulpes
ENSXETG00000003726	hbs1l	99	71.657	ENSXCOG00000005323	hbs1l	100	71.159	Xiphophorus_couchianus
ENSXETG00000003726	hbs1l	100	70.042	ENSXMAG00000004359	hbs1l	100	69.565	Xiphophorus_maculatus