EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000003833 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpa0
Alias: -
Full Name: Xenopus tropicalis heterogeneous nuclear ribonucleoprotein A0 (hnrnpa0)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 1251 bases
Position: chrGL172701.1:305039-306289
Accession: NM_203592
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000008337	RRM_1	PF00076.22	7.4e-35	1	2
ENSXETP00000008337	RRM_1	PF00076.22	7.4e-35	2	2
ENSXETP00000008337	HnRNPA1	PF11627.8	3.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000008337	-	1251	-	ENSXETP00000008337	312 (aa)	-	F6ZMQ9

Gene Model

Click here to download ENSXETG00000003833's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000003833's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000003833	hnrnpa0	63	56.853	ENSXETG00000012170	hnrnpa2b1	90	47.826
ENSXETG00000003833	hnrnpa0	55	43.478	ENSXETG00000008680	elavl4	65	43.478
ENSXETG00000003833	hnrnpa0	64	35.500	ENSXETG00000012569	hnrnpd	57	36.207
ENSXETG00000003833	hnrnpa0	51	42.029	ENSXETG00000016741	elavl3	63	42.029
ENSXETG00000003833	hnrnpa0	57	33.333	ENSXETG00000008752	elavl1	66	39.130
ENSXETG00000003833	hnrnpa0	51	43.478	ENSXETG00000009387	elavl2	69	43.478
ENSXETG00000003833	hnrnpa0	57	43.678	ENSXETG00000012216	msi1	52	43.889
ENSXETG00000003833	hnrnpa0	57	36.000	ENSXETG00000024618	rbm24	51	36.000
ENSXETG00000003833	hnrnpa0	56	60.795	ENSXETG00000021277	hnrnpa1	51	60.795
ENSXETG00000003833	hnrnpa0	88	33.808	ENSXETG00000023026	hnrnpdl	57	35.057
ENSXETG00000003833	hnrnpa0	62	36.190	ENSXETG00000003704	dazap1	55	37.368
ENSXETG00000003833	hnrnpa0	77	31.667	ENSXETG00000003836	hnrnpab	56	35.393

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000003833	hnrnpa0	85	69.888	ENSG00000177733	HNRNPA0	94	69.338	Homo_sapiens
ENSXETG00000003833	hnrnpa0	57	62.360	ENSAPOG00000003364	HNRNPA0	93	50.680	Acanthochromis_polyacanthus
ENSXETG00000003833	hnrnpa0	63	56.923	ENSAPOG00000003688	hnrnpa3	82	48.505	Acanthochromis_polyacanthus
ENSXETG00000003833	hnrnpa0	58	68.132	ENSAPOG00000003387	HNRNPA0	63	68.132	Acanthochromis_polyacanthus
ENSXETG00000003833	hnrnpa0	58	59.341	ENSAPOG00000014678	-	51	59.659	Acanthochromis_polyacanthus
ENSXETG00000003833	hnrnpa0	59	58.470	ENSAPOG00000003641	hnrnpa3	72	59.341	Acanthochromis_polyacanthus
ENSXETG00000003833	hnrnpa0	55	57.246	ENSAMEG00000004293	-	88	46.154	Ailuropoda_melanoleuca
ENSXETG00000003833	hnrnpa0	73	59.389	ENSACIG00000021834	HNRNPA0	81	67.935	Amphilophus_citrinellus
ENSXETG00000003833	hnrnpa0	63	56.923	ENSAOCG00000004095	hnrnpa3	82	48.505	Amphiprion_ocellaris
ENSXETG00000003833	hnrnpa0	63	56.923	ENSAPEG00000022522	hnrnpa3	82	48.505	Amphiprion_percula
ENSXETG00000003833	hnrnpa0	57	64.045	ENSATEG00000003526	-	94	64.045	Anabas_testudineus
ENSXETG00000003833	hnrnpa0	63	56.923	ENSATEG00000015304	hnrnpa3	88	48.980	Anabas_testudineus
ENSXETG00000003833	hnrnpa0	56	59.091	ENSANAG00000037918	-	52	58.470	Aotus_nancymaae
ENSXETG00000003833	hnrnpa0	85	72.388	ENSANAG00000017086	HNRNPA0	93	68.531	Aotus_nancymaae
ENSXETG00000003833	hnrnpa0	59	59.783	ENSACLG00000008973	HNRNPA0	88	54.044	Astatotilapia_calliptera
ENSXETG00000003833	hnrnpa0	85	69.888	ENSBTAG00000016929	HNRNPA0	91	69.338	Bos_taurus
ENSXETG00000003833	hnrnpa0	63	56.122	ENSCJAG00000013830	-	50	57.377	Callithrix_jacchus
ENSXETG00000003833	hnrnpa0	57	82.123	ENSCJAG00000006112	HNRNPA0	94	67.719	Callithrix_jacchus
ENSXETG00000003833	hnrnpa0	57	82.123	ENSCAFG00000001132	HNRNPA0	94	69.178	Canis_familiaris
ENSXETG00000003833	hnrnpa0	57	82.123	ENSCAFG00020008142	HNRNPA0	94	69.178	Canis_lupus_dingo
ENSXETG00000003833	hnrnpa0	57	82.123	ENSCHIG00000002602	HNRNPA0	94	69.231	Capra_hircus
ENSXETG00000003833	hnrnpa0	85	73.408	ENSCPOG00000026092	HNRNPA0	94	71.025	Cavia_porcellus
ENSXETG00000003833	hnrnpa0	58	81.667	ENSCCAG00000010302	HNRNPA0	93	67.483	Cebus_capucinus
ENSXETG00000003833	hnrnpa0	85	71.481	ENSCATG00000021167	HNRNPA0	93	68.990	Cercocebus_atys
ENSXETG00000003833	hnrnpa0	57	52.809	ENSCATG00000038569	-	50	53.714	Cercocebus_atys
ENSXETG00000003833	hnrnpa0	57	36.872	ENSCLAG00000007120	-	84	33.013	Chinchilla_lanigera
ENSXETG00000003833	hnrnpa0	57	82.123	ENSCLAG00000015132	HNRNPA0	94	66.548	Chinchilla_lanigera
ENSXETG00000003833	hnrnpa0	85	69.888	ENSCSAG00000000499	HNRNPA0	94	69.825	Chlorocebus_sabaeus
ENSXETG00000003833	hnrnpa0	93	66.667	ENSCPBG00000008738	HNRNPA0	97	67.114	Chrysemys_picta_bellii
ENSXETG00000003833	hnrnpa0	98	41.486	ENSCING00000013663	-	53	51.256	Ciona_intestinalis
ENSXETG00000003833	hnrnpa0	85	69.630	ENSCANG00000038062	HNRNPA0	93	69.580	Colobus_angolensis_palliatus
ENSXETG00000003833	hnrnpa0	85	73.034	ENSCGRG00001005548	Hnrnpa0	94	71.579	Cricetulus_griseus_chok1gshd
ENSXETG00000003833	hnrnpa0	60	48.925	ENSCGRG00001010070	-	58	47.802	Cricetulus_griseus_chok1gshd
ENSXETG00000003833	hnrnpa0	72	46.429	ENSCGRG00000003686	-	62	56.571	Cricetulus_griseus_crigri
ENSXETG00000003833	hnrnpa0	60	48.925	ENSCGRG00000007592	-	57	50.549	Cricetulus_griseus_crigri
ENSXETG00000003833	hnrnpa0	59	57.923	ENSDARG00000059351	hnrnpa3	87	51.460	Danio_rerio
ENSXETG00000003833	hnrnpa0	58	81.667	ENSDNOG00000030903	HNRNPA0	93	68.729	Dasypus_novemcinctus
ENSXETG00000003833	hnrnpa0	56	59.429	ENSDNOG00000031964	-	62	59.341	Dasypus_novemcinctus
ENSXETG00000003833	hnrnpa0	57	50.000	ENSDORG00000023528	-	83	43.137	Dipodomys_ordii
ENSXETG00000003833	hnrnpa0	55	47.674	ENSETEG00000007747	-	89	42.537	Echinops_telfairi
ENSXETG00000003833	hnrnpa0	56	56.962	ENSEBUG00000009297	HNRNPA0	90	46.643	Eptatretus_burgeri
ENSXETG00000003833	hnrnpa0	70	50.917	ENSEBUG00000016570	HNRNPA0	52	57.386	Eptatretus_burgeri
ENSXETG00000003833	hnrnpa0	85	72.180	ENSECAG00000032164	HNRNPA0	94	69.965	Equus_caballus
ENSXETG00000003833	hnrnpa0	89	49.821	ENSELUG00000023080	hnrnpa3	91	50.530	Esox_lucius
ENSXETG00000003833	hnrnpa0	57	82.123	ENSFCAG00000040261	HNRNPA0	94	69.792	Felis_catus
ENSXETG00000003833	hnrnpa0	58	82.873	ENSFALG00000014395	HNRNPA0	88	67.450	Ficedula_albicollis
ENSXETG00000003833	hnrnpa0	61	41.146	ENSFDAG00000009547	-	72	37.906	Fukomys_damarensis
ENSXETG00000003833	hnrnpa0	57	48.045	ENSFDAG00000014067	-	54	48.108	Fukomys_damarensis
ENSXETG00000003833	hnrnpa0	57	82.123	ENSFDAG00000019780	HNRNPA0	93	61.922	Fukomys_damarensis
ENSXETG00000003833	hnrnpa0	56	46.286	ENSFDAG00000018739	-	64	46.703	Fukomys_damarensis
ENSXETG00000003833	hnrnpa0	57	64.972	ENSFHEG00000008384	HNRNPA0	87	64.972	Fundulus_heteroclitus
ENSXETG00000003833	hnrnpa0	60	63.102	ENSFHEG00000008390	HNRNPA0	55	62.963	Fundulus_heteroclitus
ENSXETG00000003833	hnrnpa0	60	62.366	ENSGMOG00000016232	HNRNPA0	63	63.687	Gadus_morhua
ENSXETG00000003833	hnrnpa0	90	69.153	ENSGALG00000006160	HNRNPA0	95	68.385	Gallus_gallus
ENSXETG00000003833	hnrnpa0	84	51.908	ENSGACG00000004477	hnrnpa3	87	51.471	Gasterosteus_aculeatus
ENSXETG00000003833	hnrnpa0	59	68.478	ENSHBUG00000023868	HNRNPA0	71	68.478	Haplochromis_burtoni
ENSXETG00000003833	hnrnpa0	56	56.000	ENSHGLG00000014577	-	68	56.044	Heterocephalus_glaber_female
ENSXETG00000003833	hnrnpa0	85	71.805	ENSHGLG00000018216	HNRNPA0	94	70.567	Heterocephalus_glaber_female
ENSXETG00000003833	hnrnpa0	60	59.259	ENSHGLG00100006677	-	86	47.987	Heterocephalus_glaber_male
ENSXETG00000003833	hnrnpa0	60	56.614	ENSHGLG00100001336	-	89	46.688	Heterocephalus_glaber_male
ENSXETG00000003833	hnrnpa0	56	64.943	ENSHCOG00000007174	HNRNPA0	95	64.205	Hippocampus_comes
ENSXETG00000003833	hnrnpa0	59	56.831	ENSIPUG00000019815	RO32	89	47.651	Ictalurus_punctatus
ENSXETG00000003833	hnrnpa0	85	69.708	ENSJJAG00000006954	Hnrnpa0	94	68.772	Jaculus_jaculus
ENSXETG00000003833	hnrnpa0	63	55.897	ENSKMAG00000015973	hnrnpa3	88	48.649	Kryptolebias_marmoratus
ENSXETG00000003833	hnrnpa0	91	65.552	ENSLACG00000014480	HNRNPA0	91	68.459	Latimeria_chalumnae
ENSXETG00000003833	hnrnpa0	58	57.459	ENSLOCG00000006986	hnrnpa3	90	48.254	Lepisosteus_oculatus
ENSXETG00000003833	hnrnpa0	57	61.364	ENSLOCG00000006476	-	51	61.364	Lepisosteus_oculatus
ENSXETG00000003833	hnrnpa0	56	61.842	ENSLAFG00000027712	-	54	62.667	Loxodonta_africana
ENSXETG00000003833	hnrnpa0	85	69.630	ENSMFAG00000030522	HNRNPA0	93	69.580	Macaca_fascicularis
ENSXETG00000003833	hnrnpa0	57	52.222	ENSMMUG00000031232	-	50	53.107	Macaca_mulatta
ENSXETG00000003833	hnrnpa0	85	69.630	ENSMNEG00000015863	HNRNPA0	93	69.580	Macaca_nemestrina
ENSXETG00000003833	hnrnpa0	56	53.143	ENSMNEG00000038943	-	73	53.143	Macaca_nemestrina
ENSXETG00000003833	hnrnpa0	85	71.481	ENSMLEG00000026629	HNRNPA0	93	69.231	Mandrillus_leucophaeus
ENSXETG00000003833	hnrnpa0	57	52.247	ENSMLEG00000033415	-	70	41.850	Mandrillus_leucophaeus
ENSXETG00000003833	hnrnpa0	63	65.152	ENSMAMG00000017754	HNRNPA0	72	67.391	Mastacembelus_armatus
ENSXETG00000003833	hnrnpa0	59	59.783	ENSMZEG00005001055	HNRNPA0	88	54.044	Maylandia_zebra
ENSXETG00000003833	hnrnpa0	57	82.123	ENSMAUG00000018485	Hnrnpa0	61	80.435	Mesocricetus_auratus
ENSXETG00000003833	hnrnpa0	57	72.067	ENSMODG00000002463	-	95	72.067	Monodelphis_domestica
ENSXETG00000003833	hnrnpa0	58	80.663	ENSMODG00000014720	HNRNPA0	70	80.328	Monodelphis_domestica
ENSXETG00000003833	hnrnpa0	63	56.923	ENSMALG00000009691	hnrnpa3	87	49.242	Monopterus_albus
ENSXETG00000003833	hnrnpa0	57	82.123	MGP_CAROLIEiJ_G0018593	Hnrnpa0	95	69.655	Mus_caroli
ENSXETG00000003833	hnrnpa0	57	82.123	ENSMUSG00000007836	Hnrnpa0	95	70.000	Mus_musculus
ENSXETG00000003833	hnrnpa0	85	70.480	MGP_PahariEiJ_G0019657	Hnrnpa0	95	70.242	Mus_pahari
ENSXETG00000003833	hnrnpa0	57	82.123	MGP_SPRETEiJ_G0019473	Hnrnpa0	94	67.586	Mus_spretus
ENSXETG00000003833	hnrnpa0	57	82.123	ENSMPUG00000019790	HNRNPA0	94	69.655	Mustela_putorius_furo
ENSXETG00000003833	hnrnpa0	85	72.285	ENSMLUG00000012683	-	93	69.825	Myotis_lucifugus
ENSXETG00000003833	hnrnpa0	58	80.556	ENSMLUG00000028644	-	94	62.620	Myotis_lucifugus
ENSXETG00000003833	hnrnpa0	85	72.830	ENSNGAG00000008883	Hnrnpa0	94	70.251	Nannospalax_galili
ENSXETG00000003833	hnrnpa0	85	71.481	ENSNLEG00000008518	HNRNPA0	93	68.858	Nomascus_leucogenys
ENSXETG00000003833	hnrnpa0	85	71.910	ENSMEUG00000013675	HNRNPA0	93	69.231	Notamacropus_eugenii
ENSXETG00000003833	hnrnpa0	85	69.259	ENSODEG00000019566	HNRNPA0	94	69.474	Octodon_degus
ENSXETG00000003833	hnrnpa0	56	59.659	ENSODEG00000016578	-	62	59.890	Octodon_degus
ENSXETG00000003833	hnrnpa0	63	57.436	ENSONIG00000008607	hnrnpa3	74	47.667	Oreochromis_niloticus
ENSXETG00000003833	hnrnpa0	58	58.101	ENSORLG00000027074	-	81	58.101	Oryzias_latipes
ENSXETG00000003833	hnrnpa0	66	53.659	ENSORLG00000025015	-	59	56.522	Oryzias_latipes
ENSXETG00000003833	hnrnpa0	66	53.659	ENSORLG00000025332	-	59	56.522	Oryzias_latipes
ENSXETG00000003833	hnrnpa0	57	58.286	ENSORLG00020008203	-	58	59.064	Oryzias_latipes_hni
ENSXETG00000003833	hnrnpa0	82	44.014	ENSORLG00020022487	-	64	57.609	Oryzias_latipes_hni
ENSXETG00000003833	hnrnpa0	58	58.286	ENSORLG00020007109	-	58	59.064	Oryzias_latipes_hni
ENSXETG00000003833	hnrnpa0	57	59.322	ENSORLG00020007505	-	58	60.116	Oryzias_latipes_hni
ENSXETG00000003833	hnrnpa0	59	58.470	ENSORLG00015016157	-	63	58.470	Oryzias_latipes_hsok
ENSXETG00000003833	hnrnpa0	59	57.923	ENSORLG00015016169	HNRNPA0	59	58.659	Oryzias_latipes_hsok
ENSXETG00000003833	hnrnpa0	89	49.333	ENSORLG00015017144	-	58	59.770	Oryzias_latipes_hsok
ENSXETG00000003833	hnrnpa0	58	57.542	ENSORLG00015015185	-	61	58.857	Oryzias_latipes_hsok
ENSXETG00000003833	hnrnpa0	57	59.218	ENSORLG00015015182	-	78	59.218	Oryzias_latipes_hsok
ENSXETG00000003833	hnrnpa0	90	45.714	ENSORLG00015016507	-	54	59.429	Oryzias_latipes_hsok
ENSXETG00000003833	hnrnpa0	57	53.073	ENSORLG00015016236	HNRNPA0	59	50.000	Oryzias_latipes_hsok
ENSXETG00000003833	hnrnpa0	57	64.607	ENSORLG00015016302	HNRNPA0	92	54.483	Oryzias_latipes_hsok
ENSXETG00000003833	hnrnpa0	58	81.667	ENSOGAG00000025754	HNRNPA0	77	80.874	Otolemur_garnettii
ENSXETG00000003833	hnrnpa0	85	73.134	ENSOARG00000015434	HNRNPA0	92	72.161	Ovis_aries
ENSXETG00000003833	hnrnpa0	85	69.630	ENSPPAG00000005303	HNRNPA0	93	68.858	Pan_paniscus
ENSXETG00000003833	hnrnpa0	85	69.888	ENSPPRG00000014655	HNRNPA0	94	69.444	Panthera_pardus
ENSXETG00000003833	hnrnpa0	85	69.630	ENSPTRG00000017273	HNRNPA0	93	68.858	Pan_troglodytes
ENSXETG00000003833	hnrnpa0	85	71.481	ENSPANG00000012900	HNRNPA0	93	69.231	Papio_anubis
ENSXETG00000003833	hnrnpa0	56	73.864	ENSPKIG00000020270	HNRNPA0	93	62.357	Paramormyrops_kingsleyae
ENSXETG00000003833	hnrnpa0	60	56.989	ENSPKIG00000022916	hnrnpa3	65	56.906	Paramormyrops_kingsleyae
ENSXETG00000003833	hnrnpa0	57	75.706	ENSPKIG00000020281	-	54	73.913	Paramormyrops_kingsleyae
ENSXETG00000003833	hnrnpa0	58	55.556	ENSPMGG00000000747	hnrnpa3	70	58.000	Periophthalmus_magnuspinnatus
ENSXETG00000003833	hnrnpa0	85	64.151	ENSPEMG00000020274	Hnrnpa0	93	63.701	Peromyscus_maniculatus_bairdii
ENSXETG00000003833	hnrnpa0	63	56.566	ENSPMAG00000004449	-	77	58.333	Petromyzon_marinus
ENSXETG00000003833	hnrnpa0	55	65.116	ENSPLAG00000015223	-	93	53.125	Poecilia_latipinna
ENSXETG00000003833	hnrnpa0	56	70.414	ENSPMEG00000017025	HNRNPA0	98	69.591	Poecilia_mexicana
ENSXETG00000003833	hnrnpa0	73	51.982	ENSPREG00000005411	hnrnpa3	61	57.297	Poecilia_reticulata
ENSXETG00000003833	hnrnpa0	56	69.620	ENSPREG00000010619	HNRNPA0	75	69.620	Poecilia_reticulata
ENSXETG00000003833	hnrnpa0	56	61.935	ENSPPYG00000012967	-	71	61.146	Pongo_abelii
ENSXETG00000003833	hnrnpa0	56	59.659	ENSPPYG00000001012	-	60	59.890	Pongo_abelii
ENSXETG00000003833	hnrnpa0	85	69.888	ENSPPYG00000015814	HNRNPA0	94	69.338	Pongo_abelii
ENSXETG00000003833	hnrnpa0	70	51.835	ENSPNYG00000008424	hnrnpa3	74	59.659	Pundamilia_nyererei
ENSXETG00000003833	hnrnpa0	56	71.023	ENSPNAG00000023333	HNRNPA0	93	61.314	Pygocentrus_nattereri
ENSXETG00000003833	hnrnpa0	57	82.123	ENSRNOG00000039876	LOC681410	96	67.931	Rattus_norvegicus
ENSXETG00000003833	hnrnpa0	85	69.630	ENSRBIG00000023673	HNRNPA0	93	70.070	Rhinopithecus_bieti
ENSXETG00000003833	hnrnpa0	56	55.000	ENSRROG00000034643	-	89	43.554	Rhinopithecus_roxellana
ENSXETG00000003833	hnrnpa0	85	69.630	ENSRROG00000002558	HNRNPA0	93	70.070	Rhinopithecus_roxellana
ENSXETG00000003833	hnrnpa0	56	73.143	ENSSFOG00015002650	HNRNPA0	57	71.038	Scleropages_formosus
ENSXETG00000003833	hnrnpa0	60	58.602	ENSSFOG00015001814	hnrnpa3	80	47.910	Scleropages_formosus
ENSXETG00000003833	hnrnpa0	63	57.436	ENSSDUG00000000381	hnrnpa3	89	54.152	Seriola_dumerili
ENSXETG00000003833	hnrnpa0	57	82.682	ENSSPUG00000016613	HNRNPA0	95	68.493	Sphenodon_punctatus
ENSXETG00000003833	hnrnpa0	63	46.465	ENSSSCG00000040926	-	53	47.340	Sus_scrofa
ENSXETG00000003833	hnrnpa0	66	47.087	ENSSSCG00000033635	-	53	47.340	Sus_scrofa
ENSXETG00000003833	hnrnpa0	63	43.137	ENSSSCG00000001098	-	78	37.124	Sus_scrofa
ENSXETG00000003833	hnrnpa0	57	77.966	ENSTGUG00000001186	HNRNPA0	95	64.626	Taeniopygia_guttata
ENSXETG00000003833	hnrnpa0	58	62.222	ENSTRUG00000021494	-	98	50.505	Takifugu_rubripes
ENSXETG00000003833	hnrnpa0	85	73.308	ENSTTRG00000000499	HNRNPA0	94	70.526	Tursiops_truncatus
ENSXETG00000003833	hnrnpa0	57	82.123	ENSVVUG00000014736	HNRNPA0	94	69.416	Vulpes_vulpes
ENSXETG00000003833	hnrnpa0	57	68.966	ENSXMAG00000019804	HNRNPA0	98	68.966	Xiphophorus_maculatus
ENSXETG00000003833	hnrnpa0	59	63.784	ENSXMAG00000029150	HNRNPA0	96	52.980	Xiphophorus_maculatus