EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000003876 (Gene tree)
Gene ID: -
Gene Symbol: slbp
Alias: -
Full Name: Xenopus tropicalis stem-loop binding protein (slbp)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 10186 bases
Position: chrGL172873.1:1046566-1056751
Accession: NM_001004836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000008408	SLBP_RNA_bind	PF15247.6	4.6e-30	1	1
ENSXETP00000034876	SLBP_RNA_bind	PF15247.6	5.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000008408	-	3681	-	ENSXETP00000008408	254 (aa)	-	Q6DK79
ENSXETT00000034876	-	3685	-	ENSXETP00000034876	271 (aa)	-	L7N3J5

Gene Model

Click here to download ENSXETG00000003876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000003876's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000003876	slbp	97	58.955	ENSG00000163950	SLBP	96	56.180	Homo_sapiens
ENSXETG00000003876	slbp	92	49.057	ENSAPOG00000004953	slbp	94	49.057	Acanthochromis_polyacanthus
ENSXETG00000003876	slbp	75	64.286	ENSAMEG00000016915	SLBP	96	61.244	Ailuropoda_melanoleuca
ENSXETG00000003876	slbp	88	51.626	ENSACIG00000022308	slbp	94	51.626	Amphilophus_citrinellus
ENSXETG00000003876	slbp	92	49.057	ENSAOCG00000024545	slbp	94	49.057	Amphiprion_ocellaris
ENSXETG00000003876	slbp	92	49.434	ENSAPEG00000017629	slbp	94	49.434	Amphiprion_percula
ENSXETG00000003876	slbp	90	49.042	ENSATEG00000016358	slbp	92	49.042	Anabas_testudineus
ENSXETG00000003876	slbp	77	56.019	ENSAPLG00000015989	-	98	56.944	Anas_platyrhynchos
ENSXETG00000003876	slbp	97	56.727	ENSANAG00000034769	SLBP	96	54.015	Aotus_nancymaae
ENSXETG00000003876	slbp	95	49.807	ENSACLG00000007036	-	91	49.807	Astatotilapia_calliptera
ENSXETG00000003876	slbp	89	52.107	ENSAMXG00000014527	slbp	93	53.516	Astyanax_mexicanus
ENSXETG00000003876	slbp	95	60.150	ENSBTAG00000001328	SLBP	89	59.127	Bos_taurus
ENSXETG00000003876	slbp	97	55.396	ENSCJAG00000001790	SLBP	96	52.708	Callithrix_jacchus
ENSXETG00000003876	slbp	94	60.465	ENSCAFG00000015016	SLBP	91	59.533	Canis_familiaris
ENSXETG00000003876	slbp	94	60.465	ENSCAFG00020012334	SLBP	91	59.533	Canis_lupus_dingo
ENSXETG00000003876	slbp	93	61.024	ENSCHIG00000019364	SLBP	89	59.127	Capra_hircus
ENSXETG00000003876	slbp	95	60.305	ENSTSYG00000000376	SLBP	94	57.471	Carlito_syrichta
ENSXETG00000003876	slbp	61	61.850	ENSCAPG00000016340	SLBP	95	56.395	Cavia_aperea
ENSXETG00000003876	slbp	76	63.721	ENSCPOG00000000031	SLBP	91	54.826	Cavia_porcellus
ENSXETG00000003876	slbp	97	58.582	ENSCATG00000029173	SLBP	96	55.805	Cercocebus_atys
ENSXETG00000003876	slbp	76	64.319	ENSCLAG00000008157	SLBP	91	56.349	Chinchilla_lanigera
ENSXETG00000003876	slbp	97	47.842	ENSCSAG00000015628	SLBP	96	45.126	Chlorocebus_sabaeus
ENSXETG00000003876	slbp	93	62.846	ENSCPBG00000000746	SLBP	96	57.621	Chrysemys_picta_bellii
ENSXETG00000003876	slbp	76	64.216	ENSCANG00000041008	SLBP	96	61.765	Colobus_angolensis_palliatus
ENSXETG00000003876	slbp	92	59.302	ENSCGRG00001012991	-	93	56.420	Cricetulus_griseus_chok1gshd
ENSXETG00000003876	slbp	95	57.895	ENSCGRG00001009760	-	94	55.094	Cricetulus_griseus_chok1gshd
ENSXETG00000003876	slbp	95	57.895	ENSCGRG00000004506	Slbp	94	55.094	Cricetulus_griseus_crigri
ENSXETG00000003876	slbp	91	48.450	ENSCSEG00000020337	-	95	47.388	Cynoglossus_semilaevis
ENSXETG00000003876	slbp	88	52.823	ENSCVAG00000019592	-	94	52.529	Cyprinodon_variegatus
ENSXETG00000003876	slbp	90	49.807	ENSDARG00000100558	slbp	83	49.035	Danio_rerio
ENSXETG00000003876	slbp	93	57.422	ENSDNOG00000047539	SLBP	91	56.078	Dasypus_novemcinctus
ENSXETG00000003876	slbp	74	60.577	ENSDORG00000003028	Slbp	96	66.879	Dipodomys_ordii
ENSXETG00000003876	slbp	78	61.809	ENSETEG00000004641	SLBP	93	59.276	Echinops_telfairi
ENSXETG00000003876	slbp	65	63.587	ENSEASG00005022714	SLBP	95	59.016	Equus_asinus_asinus
ENSXETG00000003876	slbp	86	59.322	ENSECAG00000011689	SLBP	75	55.745	Equus_caballus
ENSXETG00000003876	slbp	93	50.566	ENSELUG00000012854	slbp	96	49.627	Esox_lucius
ENSXETG00000003876	slbp	93	59.449	ENSFCAG00000000169	SLBP	92	57.308	Felis_catus
ENSXETG00000003876	slbp	93	57.937	ENSFALG00000010003	-	91	55.159	Ficedula_albicollis
ENSXETG00000003876	slbp	79	63.677	ENSFDAG00000007592	SLBP	98	57.198	Fukomys_damarensis
ENSXETG00000003876	slbp	87	51.394	ENSFHEG00000007497	slbp	91	51.394	Fundulus_heteroclitus
ENSXETG00000003876	slbp	57	65.101	ENSGMOG00000015352	slbp	95	65.101	Gadus_morhua
ENSXETG00000003876	slbp	93	58.333	ENSGALG00000015712	SLBP	97	53.184	Gallus_gallus
ENSXETG00000003876	slbp	87	50.000	ENSGAFG00000019577	slbp	92	50.781	Gambusia_affinis
ENSXETG00000003876	slbp	96	51.822	ENSGACG00000019596	slbp	99	52.245	Gasterosteus_aculeatus
ENSXETG00000003876	slbp	84	66.822	ENSGAGG00000012096	SLBP	93	59.307	Gopherus_agassizii
ENSXETG00000003876	slbp	97	58.955	ENSGGOG00000003167	SLBP	96	56.180	Gorilla_gorilla
ENSXETG00000003876	slbp	95	49.807	ENSHBUG00000003338	-	91	49.807	Haplochromis_burtoni
ENSXETG00000003876	slbp	92	50.198	ENSHGLG00000008313	-	95	50.775	Heterocephalus_glaber_female
ENSXETG00000003876	slbp	76	57.653	ENSHGLG00000005955	-	93	53.061	Heterocephalus_glaber_female
ENSXETG00000003876	slbp	77	56.019	ENSHGLG00000010461	-	92	52.459	Heterocephalus_glaber_female
ENSXETG00000003876	slbp	92	50.988	ENSHGLG00100010510	-	95	51.550	Heterocephalus_glaber_male
ENSXETG00000003876	slbp	97	58.456	ENSHGLG00100014018	-	94	62.245	Heterocephalus_glaber_male
ENSXETG00000003876	slbp	77	56.019	ENSHGLG00100014906	-	92	52.459	Heterocephalus_glaber_male
ENSXETG00000003876	slbp	96	49.281	ENSHCOG00000013425	slbp	99	49.281	Hippocampus_comes
ENSXETG00000003876	slbp	74	58.947	ENSIPUG00000016780	slbp	78	55.825	Ictalurus_punctatus
ENSXETG00000003876	slbp	99	56.631	ENSSTOG00000003262	SLBP	98	54.710	Ictidomys_tridecemlineatus
ENSXETG00000003876	slbp	97	58.303	ENSJJAG00000020549	-	97	55.636	Jaculus_jaculus
ENSXETG00000003876	slbp	93	60.400	ENSJJAG00000002394	-	96	56.667	Jaculus_jaculus
ENSXETG00000003876	slbp	90	48.659	ENSKMAG00000008187	slbp	92	49.425	Kryptolebias_marmoratus
ENSXETG00000003876	slbp	91	48.846	ENSLBEG00000024709	slbp	93	50.000	Labrus_bergylta
ENSXETG00000003876	slbp	94	57.752	ENSLACG00000014623	SLBP	93	58.527	Latimeria_chalumnae
ENSXETG00000003876	slbp	94	52.190	ENSLOCG00000011027	slbp	94	51.601	Lepisosteus_oculatus
ENSXETG00000003876	slbp	79	66.337	ENSLAFG00000012933	SLBP	92	59.375	Loxodonta_africana
ENSXETG00000003876	slbp	91	60.656	ENSMFAG00000030130	SLBP	87	55.109	Macaca_fascicularis
ENSXETG00000003876	slbp	93	58.824	ENSMMUG00000032303	SLBP	92	61.951	Macaca_mulatta
ENSXETG00000003876	slbp	97	43.636	ENSMNEG00000008082	SLBP	95	40.876	Macaca_nemestrina
ENSXETG00000003876	slbp	86	60.173	ENSMLEG00000024639	SLBP	93	58.009	Mandrillus_leucophaeus
ENSXETG00000003876	slbp	90	48.450	ENSMAMG00000001046	-	91	48.855	Mastacembelus_armatus
ENSXETG00000003876	slbp	95	49.807	ENSMZEG00005017261	-	91	49.807	Maylandia_zebra
ENSXETG00000003876	slbp	76	61.058	ENSMGAG00000013085	SLBP	96	57.212	Meleagris_gallopavo
ENSXETG00000003876	slbp	93	58.893	ENSMAUG00000009490	Slbp	89	56.746	Mesocricetus_auratus
ENSXETG00000003876	slbp	97	57.090	ENSMICG00000014244	SLBP	96	54.307	Microcebus_murinus
ENSXETG00000003876	slbp	93	57.937	ENSMOCG00000015826	Slbp	91	60.500	Microtus_ochrogaster
ENSXETG00000003876	slbp	90	53.846	ENSMMOG00000010181	slbp	95	53.846	Mola_mola
ENSXETG00000003876	slbp	92	59.761	ENSMODG00000004304	SLBP	95	57.600	Monodelphis_domestica
ENSXETG00000003876	slbp	89	48.062	ENSMALG00000013883	-	67	49.225	Monopterus_albus
ENSXETG00000003876	slbp	93	59.684	MGP_CAROLIEiJ_G0027117	Slbp	88	61.000	Mus_caroli
ENSXETG00000003876	slbp	93	59.289	ENSMUSG00000004642	Slbp	89	61.000	Mus_musculus
ENSXETG00000003876	slbp	93	59.289	MGP_PahariEiJ_G0016901	Slbp	88	61.000	Mus_pahari
ENSXETG00000003876	slbp	93	59.289	MGP_SPRETEiJ_G0028113	Slbp	89	61.000	Mus_spretus
ENSXETG00000003876	slbp	65	62.567	ENSMPUG00000011139	SLBP	95	58.602	Mustela_putorius_furo
ENSXETG00000003876	slbp	75	60.000	ENSMLUG00000004425	SLBP	89	55.502	Myotis_lucifugus
ENSXETG00000003876	slbp	93	60.474	ENSNGAG00000020799	Slbp	93	55.556	Nannospalax_galili
ENSXETG00000003876	slbp	88	49.583	ENSNBRG00000006044	-	74	56.853	Neolamprologus_brichardi
ENSXETG00000003876	slbp	97	57.455	ENSNLEG00000000048	SLBP	96	54.745	Nomascus_leucogenys
ENSXETG00000003876	slbp	61	72.785	ENSMEUG00000002501	SLBP	98	61.932	Notamacropus_eugenii
ENSXETG00000003876	slbp	76	64.319	ENSODEG00000012641	SLBP	94	56.031	Octodon_degus
ENSXETG00000003876	slbp	95	50.000	ENSONIG00000017469	-	91	50.000	Oreochromis_niloticus
ENSXETG00000003876	slbp	76	65.865	ENSOANG00000014243	SLBP	91	62.019	Ornithorhynchus_anatinus
ENSXETG00000003876	slbp	92	48.837	ENSORLG00000024887	-	96	48.092	Oryzias_latipes
ENSXETG00000003876	slbp	89	48.810	ENSORLG00020007798	slbp	91	49.004	Oryzias_latipes_hni
ENSXETG00000003876	slbp	92	48.828	ENSORLG00015016656	slbp	95	47.191	Oryzias_latipes_hsok
ENSXETG00000003876	slbp	90	47.619	ENSOMEG00000010818	slbp	95	46.768	Oryzias_melastigma
ENSXETG00000003876	slbp	76	66.507	ENSOGAG00000009750	SLBP	96	56.015	Otolemur_garnettii
ENSXETG00000003876	slbp	75	66.190	ENSOARG00000016090	SLBP	96	62.679	Ovis_aries
ENSXETG00000003876	slbp	97	58.955	ENSPPAG00000033300	SLBP	96	56.180	Pan_paniscus
ENSXETG00000003876	slbp	80	61.086	ENSPPRG00000016897	SLBP	98	57.708	Panthera_pardus
ENSXETG00000003876	slbp	65	63.587	ENSPTIG00000015057	SLBP	95	59.563	Panthera_tigris_altaica
ENSXETG00000003876	slbp	97	58.846	ENSPTRG00000015832	SLBP	96	55.805	Pan_troglodytes
ENSXETG00000003876	slbp	97	55.797	ENSPANG00000004932	SLBP	88	61.951	Papio_anubis
ENSXETG00000003876	slbp	94	53.585	ENSPKIG00000006183	slbp	93	52.985	Paramormyrops_kingsleyae
ENSXETG00000003876	slbp	85	49.776	ENSPMGG00000017684	-	99	50.000	Periophthalmus_magnuspinnatus
ENSXETG00000003876	slbp	97	56.985	ENSPEMG00000018369	Slbp	98	53.986	Peromyscus_maniculatus_bairdii
ENSXETG00000003876	slbp	92	59.387	ENSPCIG00000013575	SLBP	75	56.923	Phascolarctos_cinereus
ENSXETG00000003876	slbp	87	50.000	ENSPFOG00000000462	slbp	92	50.000	Poecilia_formosa
ENSXETG00000003876	slbp	87	50.000	ENSPLAG00000008300	slbp	92	50.000	Poecilia_latipinna
ENSXETG00000003876	slbp	87	50.000	ENSPMEG00000020807	slbp	92	50.000	Poecilia_mexicana
ENSXETG00000003876	slbp	87	50.000	ENSPREG00000004561	slbp	92	50.000	Poecilia_reticulata
ENSXETG00000003876	slbp	97	58.955	ENSPPYG00000014529	SLBP	96	56.180	Pongo_abelii
ENSXETG00000003876	slbp	97	58.209	ENSPCOG00000017399	SLBP	96	55.431	Propithecus_coquereli
ENSXETG00000003876	slbp	93	57.312	ENSPVAG00000002807	SLBP	98	53.623	Pteropus_vampyrus
ENSXETG00000003876	slbp	95	49.807	ENSPNYG00000005451	-	91	49.807	Pundamilia_nyererei
ENSXETG00000003876	slbp	90	53.414	ENSPNAG00000018503	slbp	93	53.414	Pygocentrus_nattereri
ENSXETG00000003876	slbp	93	58.893	ENSRNOG00000037162	Slbp	91	57.588	Rattus_norvegicus
ENSXETG00000003876	slbp	97	58.582	ENSRBIG00000039159	SLBP	96	55.805	Rhinopithecus_bieti
ENSXETG00000003876	slbp	93	60.484	ENSRROG00000030081	SLBP	92	57.769	Rhinopithecus_roxellana
ENSXETG00000003876	slbp	66	64.804	ENSSBOG00000033897	SLBP	95	61.453	Saimiri_boliviensis_boliviensis
ENSXETG00000003876	slbp	92	59.770	ENSSHAG00000013939	SLBP	87	57.692	Sarcophilus_harrisii
ENSXETG00000003876	slbp	90	51.969	ENSSFOG00015019429	slbp	92	51.163	Scleropages_formosus
ENSXETG00000003876	slbp	93	46.667	ENSSMAG00000016028	-	95	46.667	Scophthalmus_maximus
ENSXETG00000003876	slbp	88	48.810	ENSSDUG00000000855	-	92	49.416	Seriola_dumerili
ENSXETG00000003876	slbp	56	54.110	ENSSLDG00000022893	-	86	54.110	Seriola_lalandi_dorsalis
ENSXETG00000003876	slbp	76	40.513	ENSSLDG00000007554	-	60	37.755	Seriola_lalandi_dorsalis
ENSXETG00000003876	slbp	91	58.943	ENSSPUG00000016007	SLBP	92	55.510	Sphenodon_punctatus
ENSXETG00000003876	slbp	88	48.819	ENSSPAG00000004021	slbp	90	49.606	Stegastes_partitus
ENSXETG00000003876	slbp	94	59.690	ENSSSCG00000008676	SLBP	91	57.198	Sus_scrofa
ENSXETG00000003876	slbp	93	56.746	ENSTGUG00000010626	-	96	53.968	Taeniopygia_guttata
ENSXETG00000003876	slbp	90	47.893	ENSTRUG00000000688	slbp	93	47.955	Takifugu_rubripes
ENSXETG00000003876	slbp	76	53.646	ENSTNIG00000000484	-	74	53.646	Tetraodon_nigroviridis
ENSXETG00000003876	slbp	93	40.079	ENSTBEG00000004085	SLBP	69	59.140	Tupaia_belangeri
ENSXETG00000003876	slbp	76	63.158	ENSTTRG00000010901	-	96	60.577	Tursiops_truncatus
ENSXETG00000003876	slbp	66	60.556	ENSTTRG00000004010	-	100	57.542	Tursiops_truncatus
ENSXETG00000003876	slbp	93	59.449	ENSUAMG00000012990	SLBP	89	58.103	Ursus_americanus
ENSXETG00000003876	slbp	65	63.587	ENSUMAG00000006119	SLBP	95	60.109	Ursus_maritimus
ENSXETG00000003876	slbp	94	60.078	ENSVVUG00000015578	-	91	59.144	Vulpes_vulpes
ENSXETG00000003876	slbp	78	56.938	ENSXCOG00000008275	slbp	79	56.938	Xiphophorus_couchianus
ENSXETG00000003876	slbp	93	47.794	ENSXMAG00000001331	-	97	47.794	Xiphophorus_maculatus