EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000003957 (Gene tree)
Gene ID: -
Gene Symbol: exd3
Alias: -
Full Name: exonuclease 3'-5' domain containing 3
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 26263 bases
Position: chrGL173560.1:78095-104357
Accession: XB-GENE-6046956
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000060688	Xpo1	PF08389.12	2.2e-20	1	1
ENSXETP00000062507	Xpo1	PF08389.12	2.2e-20	1	1
ENSXETP00000062507	IBN_N	PF03810.19	6.9e-05	1	1
ENSXETP00000060688	IBN_N	PF03810.19	6.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000064384	-	3642	-	ENSXETP00000060688	1214 (aa)	-	F6RDP0
ENSXETT00000061519	-	3624	-	ENSXETP00000062507	1208 (aa)	-	F6VV59

Gene Model

Click here to download ENSXETG00000003957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000003957's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000003957	exd3	77	53.012	ENSXETG00000010883	xpo5	93	53.125

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000003957	exd3	99	45.425	ENSG00000124571	XPO5	96	57.534	Homo_sapiens
ENSXETG00000003957	exd3	91	49.746	ENSAPOG00000018844	si:ch211-233m11.2	96	49.746	Acanthochromis_polyacanthus
ENSXETG00000003957	exd3	99	45.222	ENSAMEG00000012197	XPO5	99	44.700	Ailuropoda_melanoleuca
ENSXETG00000003957	exd3	98	39.585	ENSACIG00000020796	si:ch211-233m11.2	98	39.318	Amphilophus_citrinellus
ENSXETG00000003957	exd3	88	40.698	ENSAOCG00000004757	si:ch211-233m11.2	92	40.698	Amphiprion_ocellaris
ENSXETG00000003957	exd3	87	42.105	ENSAPEG00000012728	si:ch211-233m11.2	91	42.105	Amphiprion_percula
ENSXETG00000003957	exd3	100	37.967	ENSATEG00000002222	si:ch211-233m11.2	99	38.173	Anabas_testudineus
ENSXETG00000003957	exd3	99	44.399	ENSAPLG00000001469	XPO5	99	44.217	Anas_platyrhynchos
ENSXETG00000003957	exd3	98	44.510	ENSACAG00000009808	XPO5	98	44.174	Anolis_carolinensis
ENSXETG00000003957	exd3	99	45.710	ENSANAG00000029648	XPO5	99	45.095	Aotus_nancymaae
ENSXETG00000003957	exd3	93	41.718	ENSACLG00000011682	si:ch211-233m11.2	95	41.718	Astatotilapia_calliptera
ENSXETG00000003957	exd3	74	41.071	ENSAMXG00000005187	XPO5	100	40.700	Astyanax_mexicanus
ENSXETG00000003957	exd3	99	44.581	ENSBTAG00000018970	XPO5	99	43.970	Bos_taurus
ENSXETG00000003957	exd3	99	45.425	ENSCJAG00000005612	XPO5	99	44.847	Callithrix_jacchus
ENSXETG00000003957	exd3	99	45.342	ENSCAFG00000001892	XPO5	99	44.984	Canis_familiaris
ENSXETG00000003957	exd3	99	44.125	ENSCHIG00000011271	XPO5	99	43.621	Capra_hircus
ENSXETG00000003957	exd3	96	44.865	ENSCPOG00000009917	XPO5	99	44.793	Cavia_porcellus
ENSXETG00000003957	exd3	99	45.589	ENSCCAG00000017800	XPO5	99	45.012	Cebus_capucinus
ENSXETG00000003957	exd3	99	45.260	ENSCATG00000036321	XPO5	99	44.683	Cercocebus_atys
ENSXETG00000003957	exd3	99	45.111	ENSCLAG00000009723	XPO5	99	44.930	Chinchilla_lanigera
ENSXETG00000003957	exd3	99	45.260	ENSCSAG00000012047	XPO5	99	44.683	Chlorocebus_sabaeus
ENSXETG00000003957	exd3	76	40.980	ENSCHOG00000006606	XPO5	91	40.980	Choloepus_hoffmanni
ENSXETG00000003957	exd3	99	45.809	ENSCPBG00000025210	XPO5	98	45.643	Chrysemys_picta_bellii
ENSXETG00000003957	exd3	99	45.342	ENSCANG00000043106	XPO5	99	44.765	Colobus_angolensis_palliatus
ENSXETG00000003957	exd3	99	43.729	ENSCGRG00001010034	Xpo5	98	43.234	Cricetulus_griseus_chok1gshd
ENSXETG00000003957	exd3	99	43.729	ENSCGRG00000013221	Xpo5	98	43.234	Cricetulus_griseus_crigri
ENSXETG00000003957	exd3	72	38.584	ENSCSEG00000004593	XPO5	97	38.584	Cynoglossus_semilaevis
ENSXETG00000003957	exd3	98	38.616	ENSCVAG00000014491	si:ch211-233m11.2	98	38.346	Cyprinodon_variegatus
ENSXETG00000003957	exd3	75	40.435	ENSDARG00000098868	XPO5	100	46.595	Danio_rerio
ENSXETG00000003957	exd3	99	44.745	ENSDNOG00000009443	XPO5	90	44.171	Dasypus_novemcinctus
ENSXETG00000003957	exd3	89	51.466	ENSDORG00000000432	Xpo5	99	51.485	Dipodomys_ordii
ENSXETG00000003957	exd3	91	43.459	ENSETEG00000010810	XPO5	90	42.832	Echinops_telfairi
ENSXETG00000003957	exd3	69	39.634	ENSEBUG00000011631	si:ch211-233m11.2	91	39.634	Eptatretus_burgeri
ENSXETG00000003957	exd3	99	45.244	ENSEASG00005003351	XPO5	99	44.628	Equus_asinus_asinus
ENSXETG00000003957	exd3	99	37.211	ENSEEUG00000005499	XPO5	98	36.799	Erinaceus_europaeus
ENSXETG00000003957	exd3	99	39.330	ENSELUG00000021008	si:ch211-233m11.2	98	39.541	Esox_lucius
ENSXETG00000003957	exd3	99	44.500	ENSFCAG00000009737	XPO5	98	44.079	Felis_catus
ENSXETG00000003957	exd3	92	44.356	ENSFALG00000012130	XPO5	98	44.337	Ficedula_albicollis
ENSXETG00000003957	exd3	99	45.507	ENSFDAG00000007516	XPO5	99	44.646	Fukomys_damarensis
ENSXETG00000003957	exd3	98	39.459	ENSFHEG00000022609	si:ch211-233m11.2	98	39.130	Fundulus_heteroclitus
ENSXETG00000003957	exd3	98	38.861	ENSGMOG00000012528	si:ch211-233m11.2	98	38.715	Gadus_morhua
ENSXETG00000003957	exd3	99	45.417	ENSGALG00000010341	XPO5	98	45.230	Gallus_gallus
ENSXETG00000003957	exd3	100	38.925	ENSGAFG00000009505	si:ch211-233m11.2	99	39.148	Gambusia_affinis
ENSXETG00000003957	exd3	99	39.394	ENSGACG00000008050	si:ch211-233m11.2	98	39.327	Gasterosteus_aculeatus
ENSXETG00000003957	exd3	99	45.440	ENSGAGG00000010628	XPO5	99	45.275	Gopherus_agassizii
ENSXETG00000003957	exd3	99	45.342	ENSGGOG00000007940	XPO5	98	44.765	Gorilla_gorilla
ENSXETG00000003957	exd3	98	39.708	ENSHBUG00000022345	si:ch211-233m11.2	98	39.886	Haplochromis_burtoni
ENSXETG00000003957	exd3	99	45.792	ENSHGLG00000019191	XPO5	99	45.177	Heterocephalus_glaber_female
ENSXETG00000003957	exd3	99	45.087	ENSHGLG00100014203	XPO5	98	44.472	Heterocephalus_glaber_male
ENSXETG00000003957	exd3	88	36.347	ENSHCOG00000003642	si:ch211-233m11.2	97	36.472	Hippocampus_comes
ENSXETG00000003957	exd3	98	40.233	ENSIPUG00000007740	XPO5	98	39.768	Ictalurus_punctatus
ENSXETG00000003957	exd3	99	45.425	ENSSTOG00000020172	XPO5	99	44.847	Ictidomys_tridecemlineatus
ENSXETG00000003957	exd3	99	45.169	ENSJJAG00000009521	Xpo5	99	44.637	Jaculus_jaculus
ENSXETG00000003957	exd3	74	39.826	ENSKMAG00000004007	XPO5	100	39.826	Kryptolebias_marmoratus
ENSXETG00000003957	exd3	98	39.134	ENSLBEG00000008107	si:ch211-233m11.2	98	38.866	Labrus_bergylta
ENSXETG00000003957	exd3	98	39.069	ENSLACG00000011825	XPO5	76	39.915	Latimeria_chalumnae
ENSXETG00000003957	exd3	98	40.247	ENSLOCG00000015733	si:ch211-233m11.2	97	40.133	Lepisosteus_oculatus
ENSXETG00000003957	exd3	96	45.008	ENSLAFG00000000567	XPO5	99	44.501	Loxodonta_africana
ENSXETG00000003957	exd3	99	45.260	ENSMFAG00000038120	XPO5	99	44.683	Macaca_fascicularis
ENSXETG00000003957	exd3	99	45.260	ENSMMUG00000015193	XPO5	99	44.683	Macaca_mulatta
ENSXETG00000003957	exd3	99	45.260	ENSMNEG00000035404	XPO5	99	44.683	Macaca_nemestrina
ENSXETG00000003957	exd3	99	45.260	ENSMLEG00000035689	XPO5	99	44.683	Mandrillus_leucophaeus
ENSXETG00000003957	exd3	99	38.780	ENSMAMG00000021525	si:ch211-233m11.2	98	38.884	Mastacembelus_armatus
ENSXETG00000003957	exd3	98	39.917	ENSMZEG00005027653	si:ch211-233m11.2	98	39.917	Maylandia_zebra
ENSXETG00000003957	exd3	93	44.522	ENSMGAG00000010938	XPO5	99	44.241	Meleagris_gallopavo
ENSXETG00000003957	exd3	99	43.894	ENSMAUG00000011670	Xpo5	98	43.399	Mesocricetus_auratus
ENSXETG00000003957	exd3	99	45.177	ENSMICG00000005032	XPO5	99	44.600	Microcebus_murinus
ENSXETG00000003957	exd3	99	43.482	ENSMOCG00000016105	Xpo5	98	42.987	Microtus_ochrogaster
ENSXETG00000003957	exd3	98	37.510	ENSMMOG00000010447	si:ch211-233m11.2	98	37.322	Mola_mola
ENSXETG00000003957	exd3	99	45.207	ENSMODG00000018963	XPO5	99	44.793	Monodelphis_domestica
ENSXETG00000003957	exd3	98	37.294	ENSMALG00000004677	si:ch211-233m11.2	96	40.000	Monopterus_albus
ENSXETG00000003957	exd3	99	44.500	MGP_CAROLIEiJ_G0021661	Xpo5	98	44.417	Mus_caroli
ENSXETG00000003957	exd3	99	44.665	ENSMUSG00000067150	Xpo5	98	44.582	Mus_musculus
ENSXETG00000003957	exd3	99	44.224	MGP_PahariEiJ_G0020653	Xpo5	98	44.142	Mus_pahari
ENSXETG00000003957	exd3	99	44.665	MGP_SPRETEiJ_G0022573	Xpo5	98	44.582	Mus_spretus
ENSXETG00000003957	exd3	52	50.847	ENSMPUG00000012904	-	99	50.847	Mustela_putorius_furo
ENSXETG00000003957	exd3	99	45.342	ENSMLUG00000017752	XPO5	99	44.683	Myotis_lucifugus
ENSXETG00000003957	exd3	99	44.188	ENSNGAG00000015950	Xpo5	98	43.611	Nannospalax_galili
ENSXETG00000003957	exd3	98	39.967	ENSNBRG00000020176	si:ch211-233m11.2	98	39.504	Neolamprologus_brichardi
ENSXETG00000003957	exd3	99	43.977	ENSNLEG00000003966	XPO5	98	43.317	Nomascus_leucogenys
ENSXETG00000003957	exd3	91	45.094	ENSOPRG00000000146	XPO5	91	45.000	Ochotona_princeps
ENSXETG00000003957	exd3	99	44.417	ENSODEG00000017078	XPO5	99	44.144	Octodon_degus
ENSXETG00000003957	exd3	98	40.429	ENSONIG00000018463	si:ch211-233m11.2	98	40.264	Oreochromis_niloticus
ENSXETG00000003957	exd3	99	45.507	ENSOCUG00000005510	XPO5	99	44.930	Oryctolagus_cuniculus
ENSXETG00000003957	exd3	98	37.829	ENSORLG00000007230	si:ch211-233m11.2	98	37.664	Oryzias_latipes
ENSXETG00000003957	exd3	98	37.747	ENSORLG00020004548	si:ch211-233m11.2	99	37.375	Oryzias_latipes_hni
ENSXETG00000003957	exd3	98	37.643	ENSORLG00015000295	si:ch211-233m11.2	99	37.375	Oryzias_latipes_hsok
ENSXETG00000003957	exd3	74	38.767	ENSOMEG00000004338	XPO5	99	38.767	Oryzias_melastigma
ENSXETG00000003957	exd3	99	44.765	ENSOGAG00000016321	XPO5	99	44.188	Otolemur_garnettii
ENSXETG00000003957	exd3	99	44.791	ENSOARG00000007607	XPO5	99	44.217	Ovis_aries
ENSXETG00000003957	exd3	99	44.737	ENSPPAG00000039971	XPO5	98	44.161	Pan_paniscus
ENSXETG00000003957	exd3	99	44.500	ENSPPRG00000009028	XPO5	98	44.079	Panthera_pardus
ENSXETG00000003957	exd3	98	45.059	ENSPTIG00000011671	XPO5	99	44.556	Panthera_tigris_altaica
ENSXETG00000003957	exd3	99	45.589	ENSPTRG00000018204	XPO5	99	44.930	Pan_troglodytes
ENSXETG00000003957	exd3	99	44.984	ENSPANG00000004080	XPO5	99	44.408	Papio_anubis
ENSXETG00000003957	exd3	98	40.214	ENSPKIG00000021336	si:ch211-233m11.2	99	39.623	Paramormyrops_kingsleyae
ENSXETG00000003957	exd3	74	37.719	ENSPMGG00000022509	XPO5	99	37.651	Periophthalmus_magnuspinnatus
ENSXETG00000003957	exd3	96	43.438	ENSPEMG00000020387	Xpo5	99	42.930	Peromyscus_maniculatus_bairdii
ENSXETG00000003957	exd3	98	35.082	ENSPMAG00000005443	si:ch211-233m11.2	98	34.992	Petromyzon_marinus
ENSXETG00000003957	exd3	99	44.628	ENSPCIG00000028142	XPO5	99	44.215	Phascolarctos_cinereus
ENSXETG00000003957	exd3	98	39.852	ENSPFOG00000004497	si:ch211-233m11.2	98	39.606	Poecilia_formosa
ENSXETG00000003957	exd3	98	39.770	ENSPLAG00000009067	si:ch211-233m11.2	98	39.523	Poecilia_latipinna
ENSXETG00000003957	exd3	98	39.934	ENSPMEG00000016885	si:ch211-233m11.2	98	39.688	Poecilia_mexicana
ENSXETG00000003957	exd3	98	39.134	ENSPREG00000017998	si:ch211-233m11.2	98	38.968	Poecilia_reticulata
ENSXETG00000003957	exd3	99	45.012	ENSPPYG00000016646	XPO5	98	44.435	Pongo_abelii
ENSXETG00000003957	exd3	82	47.278	ENSPCAG00000005038	XPO5	81	47.278	Procavia_capensis
ENSXETG00000003957	exd3	99	45.589	ENSPCOG00000028854	XPO5	99	45.095	Propithecus_coquereli
ENSXETG00000003957	exd3	99	45.012	ENSPVAG00000005691	XPO5	99	44.518	Pteropus_vampyrus
ENSXETG00000003957	exd3	98	39.434	ENSPNYG00000012685	si:ch211-233m11.2	96	41.799	Pundamilia_nyererei
ENSXETG00000003957	exd3	98	41.269	ENSPNAG00000020035	si:ch211-233m11.2	98	40.887	Pygocentrus_nattereri
ENSXETG00000003957	exd3	99	44.224	ENSRNOG00000019085	Xpo5	98	44.142	Rattus_norvegicus
ENSXETG00000003957	exd3	99	45.342	ENSRBIG00000027492	XPO5	99	44.765	Rhinopithecus_bieti
ENSXETG00000003957	exd3	99	45.425	ENSRROG00000030655	XPO5	99	44.847	Rhinopithecus_roxellana
ENSXETG00000003957	exd3	99	45.672	ENSSBOG00000004763	XPO5	99	45.095	Saimiri_boliviensis_boliviensis
ENSXETG00000003957	exd3	99	44.691	ENSSHAG00000014472	XPO5	99	44.316	Sarcophilus_harrisii
ENSXETG00000003957	exd3	91	42.320	ENSSFOG00015005618	si:ch211-233m11.2	97	42.320	Scleropages_formosus
ENSXETG00000003957	exd3	99	38.948	ENSSMAG00000001548	si:ch211-233m11.2	98	38.765	Scophthalmus_maximus
ENSXETG00000003957	exd3	98	39.321	ENSSDUG00000009710	si:ch211-233m11.2	99	40.665	Seriola_dumerili
ENSXETG00000003957	exd3	98	38.115	ENSSLDG00000020343	si:ch211-233m11.2	98	37.992	Seriola_lalandi_dorsalis
ENSXETG00000003957	exd3	93	39.517	ENSSARG00000001349	XPO5	93	39.517	Sorex_araneus
ENSXETG00000003957	exd3	98	39.283	ENSSPAG00000005659	si:ch211-233m11.2	98	39.033	Stegastes_partitus
ENSXETG00000003957	exd3	99	44.527	ENSSSCG00000001679	XPO5	99	44.159	Sus_scrofa
ENSXETG00000003957	exd3	96	44.576	ENSTGUG00000009168	XPO5	99	44.557	Taeniopygia_guttata
ENSXETG00000003957	exd3	98	38.150	ENSTRUG00000012007	si:ch211-233m11.2	98	37.903	Takifugu_rubripes
ENSXETG00000003957	exd3	98	38.710	ENSTNIG00000008658	si:ch211-233m11.2	98	38.627	Tetraodon_nigroviridis
ENSXETG00000003957	exd3	90	47.356	ENSTBEG00000002808	XPO5	89	47.356	Tupaia_belangeri
ENSXETG00000003957	exd3	99	45.425	ENSTTRG00000006347	XPO5	99	44.847	Tursiops_truncatus
ENSXETG00000003957	exd3	93	44.102	ENSUMAG00000005928	XPO5	99	43.728	Ursus_maritimus
ENSXETG00000003957	exd3	92	46.364	ENSVPAG00000004716	XPO5	94	46.259	Vicugna_pacos
ENSXETG00000003957	exd3	99	45.260	ENSVVUG00000028952	XPO5	99	45.094	Vulpes_vulpes
ENSXETG00000003957	exd3	98	39.934	ENSXCOG00000013237	si:ch211-233m11.2	98	39.835	Xiphophorus_couchianus
ENSXETG00000003957	exd3	90	38.455	ENSXMAG00000002870	si:ch211-233m11.2	98	38.095	Xiphophorus_maculatus