EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000003973 (Gene tree)
Gene ID: -
Gene Symbol: trub2
Alias: -
Full Name: Xenopus tropicalis TruB pseudouridine (psi) synthase family member 2 (trub2)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 15320 bases
Position: chrGL173522.1:151097-166416
Accession: NM_001011086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000008598	TruB_N	PF01509.18	4.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000008598	-	1258	-	ENSXETP00000008598	325 (aa)	-	F6YXJ7

Gene Model

Click here to download ENSXETG00000003973's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000003973's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000003973	trub2	95	61.935	ENSG00000167112	TRUB2	94	61.935	Homo_sapiens
ENSXETG00000003973	trub2	64	57.212	ENSAPOG00000015733	trub2	75	57.212	Acanthochromis_polyacanthus
ENSXETG00000003973	trub2	89	41.924	ENSAPOG00000018284	-	81	55.072	Acanthochromis_polyacanthus
ENSXETG00000003973	trub2	95	57.692	ENSAMEG00000015395	TRUB2	94	57.692	Ailuropoda_melanoleuca
ENSXETG00000003973	trub2	88	53.979	ENSACIG00000016500	trub2	87	53.979	Amphilophus_citrinellus
ENSXETG00000003973	trub2	89	55.326	ENSAOCG00000002330	trub2	85	55.326	Amphiprion_ocellaris
ENSXETG00000003973	trub2	89	55.326	ENSAPEG00000013177	trub2	85	55.326	Amphiprion_percula
ENSXETG00000003973	trub2	89	54.608	ENSATEG00000011371	trub2	92	54.608	Anabas_testudineus
ENSXETG00000003973	trub2	85	62.455	ENSAPLG00000009254	TRUB2	90	62.278	Anas_platyrhynchos
ENSXETG00000003973	trub2	85	68.364	ENSACAG00000007331	TRUB2	84	68.364	Anolis_carolinensis
ENSXETG00000003973	trub2	85	65.580	ENSANAG00000036234	TRUB2	89	65.580	Aotus_nancymaae
ENSXETG00000003973	trub2	88	54.483	ENSACLG00000010793	trub2	87	54.483	Astatotilapia_calliptera
ENSXETG00000003973	trub2	94	56.536	ENSAMXG00000031679	trub2	87	56.536	Astyanax_mexicanus
ENSXETG00000003973	trub2	85	66.304	ENSCJAG00000020009	TRUB2	83	66.304	Callithrix_jacchus
ENSXETG00000003973	trub2	85	63.309	ENSCAFG00000020068	TRUB2	84	63.309	Canis_familiaris
ENSXETG00000003973	trub2	52	61.404	ENSCAFG00020017325	-	95	61.404	Canis_lupus_dingo
ENSXETG00000003973	trub2	85	66.667	ENSCHIG00000021160	TRUB2	83	66.667	Capra_hircus
ENSXETG00000003973	trub2	85	64.855	ENSTSYG00000034163	TRUB2	83	64.855	Carlito_syrichta
ENSXETG00000003973	trub2	86	57.295	ENSCAPG00000000223	TRUB2	95	57.295	Cavia_aperea
ENSXETG00000003973	trub2	98	58.044	ENSCPOG00000013535	TRUB2	95	58.044	Cavia_porcellus
ENSXETG00000003973	trub2	93	59.016	ENSCCAG00000028463	-	92	59.016	Cebus_capucinus
ENSXETG00000003973	trub2	85	65.942	ENSCCAG00000026531	-	84	65.942	Cebus_capucinus
ENSXETG00000003973	trub2	85	66.667	ENSCATG00000038234	TRUB2	83	66.667	Cercocebus_atys
ENSXETG00000003973	trub2	93	59.406	ENSCLAG00000001702	TRUB2	93	59.406	Chinchilla_lanigera
ENSXETG00000003973	trub2	95	55.836	ENSCSAG00000014117	TRUB2	94	55.836	Chlorocebus_sabaeus
ENSXETG00000003973	trub2	95	58.576	ENSCHOG00000001555	TRUB2	93	58.576	Choloepus_hoffmanni
ENSXETG00000003973	trub2	87	65.018	ENSCPBG00000025186	TRUB2	83	65.018	Chrysemys_picta_bellii
ENSXETG00000003973	trub2	88	34.589	ENSCSAVG00000003930	-	89	34.589	Ciona_savignyi
ENSXETG00000003973	trub2	95	53.548	ENSCANG00000016135	TRUB2	93	53.548	Colobus_angolensis_palliatus
ENSXETG00000003973	trub2	85	63.043	ENSCGRG00001024441	Trub2	91	59.172	Cricetulus_griseus_chok1gshd
ENSXETG00000003973	trub2	85	63.043	ENSCGRG00000005633	Trub2	83	63.043	Cricetulus_griseus_crigri
ENSXETG00000003973	trub2	90	54.545	ENSCSEG00000001331	trub2	87	54.545	Cynoglossus_semilaevis
ENSXETG00000003973	trub2	98	49.691	ENSCVAG00000009901	trub2	97	49.691	Cyprinodon_variegatus
ENSXETG00000003973	trub2	89	58.076	ENSDARG00000028379	trub2	83	58.076	Danio_rerio
ENSXETG00000003973	trub2	78	46.063	ENSDNOG00000043967	-	78	46.063	Dasypus_novemcinctus
ENSXETG00000003973	trub2	86	62.857	ENSDNOG00000045679	-	84	62.857	Dasypus_novemcinctus
ENSXETG00000003973	trub2	85	65.217	ENSDORG00000016222	Trub2	87	65.217	Dipodomys_ordii
ENSXETG00000003973	trub2	88	34.021	FBgn0033060	CG7849	91	34.021	Drosophila_melanogaster
ENSXETG00000003973	trub2	85	63.406	ENSETEG00000009114	TRUB2	85	63.406	Echinops_telfairi
ENSXETG00000003973	trub2	70	50.000	ENSEBUG00000015723	trub2	77	50.000	Eptatretus_burgeri
ENSXETG00000003973	trub2	87	63.380	ENSEASG00005016819	TRUB2	86	63.380	Equus_asinus_asinus
ENSXETG00000003973	trub2	87	63.732	ENSECAG00000023520	TRUB2	86	63.732	Equus_caballus
ENSXETG00000003973	trub2	98	57.367	ENSEEUG00000008908	TRUB2	97	57.367	Erinaceus_europaeus
ENSXETG00000003973	trub2	90	55.410	ENSELUG00000002376	trub2	95	55.410	Esox_lucius
ENSXETG00000003973	trub2	85	65.580	ENSFCAG00000005839	TRUB2	86	65.580	Felis_catus
ENSXETG00000003973	trub2	79	64.202	ENSFALG00000001364	TRUB2	83	65.370	Ficedula_albicollis
ENSXETG00000003973	trub2	93	61.258	ENSFDAG00000021374	TRUB2	91	61.258	Fukomys_damarensis
ENSXETG00000003973	trub2	99	45.846	ENSFHEG00000014655	trub2	96	45.846	Fundulus_heteroclitus
ENSXETG00000003973	trub2	88	48.780	ENSGMOG00000000981	trub2	96	48.780	Gadus_morhua
ENSXETG00000003973	trub2	84	67.766	ENSGALG00000004920	TRUB2	67	67.766	Gallus_gallus
ENSXETG00000003973	trub2	88	53.793	ENSGAFG00000010107	trub2	87	52.881	Gambusia_affinis
ENSXETG00000003973	trub2	89	53.952	ENSGACG00000001476	trub2	87	53.952	Gasterosteus_aculeatus
ENSXETG00000003973	trub2	87	65.371	ENSGAGG00000022872	TRUB2	84	65.371	Gopherus_agassizii
ENSXETG00000003973	trub2	95	61.290	ENSGGOG00000014780	TRUB2	94	61.290	Gorilla_gorilla
ENSXETG00000003973	trub2	88	54.828	ENSHBUG00000022384	trub2	87	54.828	Haplochromis_burtoni
ENSXETG00000003973	trub2	93	62.583	ENSHGLG00000016715	TRUB2	91	62.583	Heterocephalus_glaber_female
ENSXETG00000003973	trub2	93	62.583	ENSHGLG00100016548	TRUB2	91	62.583	Heterocephalus_glaber_male
ENSXETG00000003973	trub2	90	57.143	ENSHCOG00000017748	trub2	89	57.143	Hippocampus_comes
ENSXETG00000003973	trub2	92	55.446	ENSIPUG00000017725	hdhd3	52	55.446	Ictalurus_punctatus
ENSXETG00000003973	trub2	96	59.683	ENSSTOG00000008024	-	95	59.683	Ictidomys_tridecemlineatus
ENSXETG00000003973	trub2	94	59.871	ENSSTOG00000022617	-	94	59.871	Ictidomys_tridecemlineatus
ENSXETG00000003973	trub2	85	58.484	ENSJJAG00000019181	Trub2	82	58.484	Jaculus_jaculus
ENSXETG00000003973	trub2	88	53.979	ENSKMAG00000007861	trub2	86	53.979	Kryptolebias_marmoratus
ENSXETG00000003973	trub2	89	51.890	ENSLBEG00000000907	trub2	85	51.890	Labrus_bergylta
ENSXETG00000003973	trub2	88	65.157	ENSLACG00000001515	TRUB2	85	65.157	Latimeria_chalumnae
ENSXETG00000003973	trub2	94	58.900	ENSLOCG00000000885	trub2	100	58.900	Lepisosteus_oculatus
ENSXETG00000003973	trub2	85	63.406	ENSLAFG00000002174	TRUB2	91	63.406	Loxodonta_africana
ENSXETG00000003973	trub2	85	66.304	ENSMFAG00000000881	TRUB2	83	66.304	Macaca_fascicularis
ENSXETG00000003973	trub2	85	66.304	ENSMMUG00000014146	TRUB2	83	66.304	Macaca_mulatta
ENSXETG00000003973	trub2	85	65.942	ENSMNEG00000011189	TRUB2	83	65.942	Macaca_nemestrina
ENSXETG00000003973	trub2	94	60.748	ENSMLEG00000037270	TRUB2	97	60.748	Mandrillus_leucophaeus
ENSXETG00000003973	trub2	88	54.514	ENSMAMG00000023643	trub2	95	54.514	Mastacembelus_armatus
ENSXETG00000003973	trub2	88	54.828	ENSMZEG00005016018	trub2	87	54.828	Maylandia_zebra
ENSXETG00000003973	trub2	59	68.557	ENSMGAG00000003894	TRUB2	97	68.557	Meleagris_gallopavo
ENSXETG00000003973	trub2	85	64.130	ENSMAUG00000010403	Trub2	87	60.947	Mesocricetus_auratus
ENSXETG00000003973	trub2	85	64.000	ENSMICG00000047032	TRUB2	83	64.000	Microcebus_murinus
ENSXETG00000003973	trub2	85	64.130	ENSMOCG00000014291	Trub2	91	64.130	Microtus_ochrogaster
ENSXETG00000003973	trub2	89	52.249	ENSMMOG00000021674	trub2	89	52.249	Mola_mola
ENSXETG00000003973	trub2	87	64.085	ENSMODG00000005940	TRUB2	96	64.085	Monodelphis_domestica
ENSXETG00000003973	trub2	88	55.326	ENSMALG00000021231	trub2	86	55.326	Monopterus_albus
ENSXETG00000003973	trub2	85	64.130	MGP_CAROLIEiJ_G0023368	Trub2	87	60.355	Mus_caroli
ENSXETG00000003973	trub2	85	64.493	ENSMUSG00000039826	Trub2	87	60.947	Mus_musculus
ENSXETG00000003973	trub2	85	64.130	MGP_PahariEiJ_G0024826	Trub2	87	60.947	Mus_pahari
ENSXETG00000003973	trub2	85	64.130	MGP_SPRETEiJ_G0024286	Trub2	87	60.947	Mus_spretus
ENSXETG00000003973	trub2	85	60.791	ENSMPUG00000013206	TRUB2	76	60.791	Mustela_putorius_furo
ENSXETG00000003973	trub2	87	65.724	ENSMLUG00000005256	TRUB2	85	65.724	Myotis_lucifugus
ENSXETG00000003973	trub2	87	63.604	ENSNGAG00000018679	Trub2	86	63.604	Nannospalax_galili
ENSXETG00000003973	trub2	88	54.828	ENSNBRG00000016294	trub2	87	54.828	Neolamprologus_brichardi
ENSXETG00000003973	trub2	95	60.323	ENSNLEG00000017556	TRUB2	94	60.323	Nomascus_leucogenys
ENSXETG00000003973	trub2	87	64.789	ENSMEUG00000000484	TRUB2	92	64.789	Notamacropus_eugenii
ENSXETG00000003973	trub2	92	57.000	ENSOPRG00000001981	TRUB2	91	57.000	Ochotona_princeps
ENSXETG00000003973	trub2	97	59.554	ENSODEG00000017292	TRUB2	96	59.554	Octodon_degus
ENSXETG00000003973	trub2	88	54.483	ENSONIG00000004230	trub2	87	54.483	Oreochromis_niloticus
ENSXETG00000003973	trub2	57	63.978	ENSOANG00000029023	-	83	63.978	Ornithorhynchus_anatinus
ENSXETG00000003973	trub2	95	59.032	ENSOCUG00000026296	TRUB2	85	59.032	Oryctolagus_cuniculus
ENSXETG00000003973	trub2	92	52.980	ENSORLG00000020011	trub2	91	52.980	Oryzias_latipes
ENSXETG00000003973	trub2	87	54.770	ENSORLG00020011028	trub2	83	54.770	Oryzias_latipes_hni
ENSXETG00000003973	trub2	93	52.805	ENSORLG00015007494	trub2	93	52.805	Oryzias_latipes_hsok
ENSXETG00000003973	trub2	89	54.795	ENSOMEG00000006702	trub2	88	54.795	Oryzias_melastigma
ENSXETG00000003973	trub2	85	67.391	ENSOARG00000010579	-	83	67.391	Ovis_aries
ENSXETG00000003973	trub2	62	69.307	ENSOARG00000003785	-	81	69.268	Ovis_aries
ENSXETG00000003973	trub2	95	62.258	ENSPPAG00000043146	TRUB2	94	62.258	Pan_paniscus
ENSXETG00000003973	trub2	85	65.580	ENSPPRG00000006307	TRUB2	86	65.580	Panthera_pardus
ENSXETG00000003973	trub2	85	65.942	ENSPTIG00000012366	TRUB2	86	65.942	Panthera_tigris_altaica
ENSXETG00000003973	trub2	95	61.935	ENSPTRG00000021423	TRUB2	94	61.935	Pan_troglodytes
ENSXETG00000003973	trub2	95	61.935	ENSPTRG00000052151	-	94	61.935	Pan_troglodytes
ENSXETG00000003973	trub2	94	60.748	ENSPANG00000025856	TRUB2	97	60.748	Papio_anubis
ENSXETG00000003973	trub2	92	56.579	ENSPKIG00000019769	trub2	99	56.579	Paramormyrops_kingsleyae
ENSXETG00000003973	trub2	87	59.649	ENSPSIG00000015701	TRUB2	95	59.649	Pelodiscus_sinensis
ENSXETG00000003973	trub2	87	56.294	ENSPMGG00000010206	trub2	90	56.294	Periophthalmus_magnuspinnatus
ENSXETG00000003973	trub2	92	59.468	ENSPEMG00000017893	Trub2	91	59.468	Peromyscus_maniculatus_bairdii
ENSXETG00000003973	trub2	85	63.177	ENSPCIG00000026731	TRUB2	89	63.177	Phascolarctos_cinereus
ENSXETG00000003973	trub2	85	55.357	ENSPFOG00000018018	trub2	74	54.577	Poecilia_formosa
ENSXETG00000003973	trub2	85	55.357	ENSPLAG00000010484	trub2	81	54.577	Poecilia_latipinna
ENSXETG00000003973	trub2	88	53.819	ENSPMEG00000012913	trub2	85	53.819	Poecilia_mexicana
ENSXETG00000003973	trub2	86	54.417	ENSPREG00000002549	trub2	88	51.307	Poecilia_reticulata
ENSXETG00000003973	trub2	95	59.677	ENSPPYG00000019650	TRUB2	95	59.677	Pongo_abelii
ENSXETG00000003973	trub2	85	64.493	ENSPCAG00000015068	TRUB2	84	64.493	Procavia_capensis
ENSXETG00000003973	trub2	95	59.032	ENSPCOG00000017100	TRUB2	94	59.032	Propithecus_coquereli
ENSXETG00000003973	trub2	80	66.023	ENSPVAG00000001224	TRUB2	87	66.023	Pteropus_vampyrus
ENSXETG00000003973	trub2	88	54.828	ENSPNYG00000013666	trub2	87	54.828	Pundamilia_nyererei
ENSXETG00000003973	trub2	94	55.882	ENSPNAG00000017292	trub2	87	55.882	Pygocentrus_nattereri
ENSXETG00000003973	trub2	85	63.406	ENSRNOG00000043189	Trub2	85	63.406	Rattus_norvegicus
ENSXETG00000003973	trub2	95	54.194	ENSRBIG00000006965	TRUB2	93	54.194	Rhinopithecus_bieti
ENSXETG00000003973	trub2	95	60.968	ENSRROG00000042928	TRUB2	94	60.968	Rhinopithecus_roxellana
ENSXETG00000003973	trub2	85	64.493	ENSSBOG00000022439	TRUB2	83	64.493	Saimiri_boliviensis_boliviensis
ENSXETG00000003973	trub2	88	60.140	ENSSFOG00015013391	trub2	92	60.140	Scleropages_formosus
ENSXETG00000003973	trub2	89	54.296	ENSSMAG00000020820	trub2	88	54.296	Scophthalmus_maximus
ENSXETG00000003973	trub2	86	53.169	ENSSDUG00000016928	trub2	84	53.169	Seriola_dumerili
ENSXETG00000003973	trub2	86	53.873	ENSSLDG00000024701	trub2	84	53.873	Seriola_lalandi_dorsalis
ENSXETG00000003973	trub2	87	64.211	ENSSPUG00000015515	TRUB2	85	64.211	Sphenodon_punctatus
ENSXETG00000003973	trub2	90	56.803	ENSSPAG00000017865	trub2	88	56.803	Stegastes_partitus
ENSXETG00000003973	trub2	95	61.812	ENSSSCG00000005645	TRUB2	95	60.714	Sus_scrofa
ENSXETG00000003973	trub2	78	66.535	ENSTGUG00000003704	TRUB2	97	66.535	Taeniopygia_guttata
ENSXETG00000003973	trub2	90	51.361	ENSTRUG00000015499	trub2	89	51.361	Takifugu_rubripes
ENSXETG00000003973	trub2	90	51.712	ENSTNIG00000014721	trub2	100	51.712	Tetraodon_nigroviridis
ENSXETG00000003973	trub2	55	62.360	ENSTBEG00000000586	TRUB2	79	62.360	Tupaia_belangeri
ENSXETG00000003973	trub2	85	61.594	ENSTTRG00000016486	TRUB2	84	61.594	Tursiops_truncatus
ENSXETG00000003973	trub2	85	64.029	ENSUAMG00000020276	TRUB2	81	64.029	Ursus_americanus
ENSXETG00000003973	trub2	85	63.669	ENSUMAG00000022051	TRUB2	81	63.669	Ursus_maritimus
ENSXETG00000003973	trub2	95	46.965	ENSVPAG00000005793	TRUB2	97	46.965	Vicugna_pacos
ENSXETG00000003973	trub2	85	63.309	ENSVVUG00000013451	TRUB2	79	63.309	Vulpes_vulpes
ENSXETG00000003973	trub2	87	53.846	ENSXCOG00000008759	trub2	85	53.472	Xiphophorus_couchianus
ENSXETG00000003973	trub2	87	54.196	ENSXMAG00000015478	trub2	85	53.819	Xiphophorus_maculatus