EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000004190 (Gene tree)
Gene ID: -
Gene Symbol: patz1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 18666 bases
Position: chrGL172648.1:5482357-5501022
Accession: XB-GENE-976137
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000009079	zf-C2H2	PF00096.26	1.1e-23	1	4
ENSXETP00000009079	zf-C2H2	PF00096.26	1.1e-23	2	4
ENSXETP00000009079	zf-C2H2	PF00096.26	1.1e-23	3	4
ENSXETP00000009079	zf-C2H2	PF00096.26	1.1e-23	4	4
ENSXETP00000009079	zf-met	PF12874.7	8.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000009079	-	1938	-	ENSXETP00000009079	645 (aa)	-	F7AFD8

Gene Model

Click here to download ENSXETG00000004190's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000004190's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000004190	patz1	54	34.524	ENSXETG00000013882	-	92	34.524
ENSXETG00000004190	patz1	57	38.012	ENSXETG00000027149	-	98	38.012
ENSXETG00000004190	patz1	52	32.941	ENSXETG00000030967	-	96	34.247
ENSXETG00000004190	patz1	55	35.260	ENSXETG00000016062	znf184	91	35.260
ENSXETG00000004190	patz1	59	37.349	ENSXETG00000016781	-	99	34.756
ENSXETG00000004190	patz1	55	35.450	ENSXETG00000026673	-	93	35.450
ENSXETG00000004190	patz1	53	36.905	ENSXETG00000006575	znf420	77	36.970
ENSXETG00000004190	patz1	63	33.929	ENSXETG00000031310	-	62	30.263
ENSXETG00000004190	patz1	53	33.333	ENSXETG00000032038	-	89	33.333
ENSXETG00000004190	patz1	54	36.424	ENSXETG00000012506	znf91	99	36.585
ENSXETG00000004190	patz1	89	34.270	ENSXETG00000009952	zbtb41	80	39.759
ENSXETG00000004190	patz1	58	30.841	ENSXETG00000023597	-	99	32.195
ENSXETG00000004190	patz1	52	34.483	ENSXETG00000013744	znf319	81	34.483
ENSXETG00000004190	patz1	52	38.824	ENSXETG00000024118	-	100	38.824
ENSXETG00000004190	patz1	52	33.918	ENSXETG00000025282	-	96	33.918
ENSXETG00000004190	patz1	66	39.241	ENSXETG00000006162	zbtb47	59	39.241
ENSXETG00000004190	patz1	52	32.749	ENSXETG00000002101	prdm5	68	32.749
ENSXETG00000004190	patz1	52	33.529	ENSXETG00000033098	ZNF366	50	33.529
ENSXETG00000004190	patz1	63	35.366	ENSXETG00000017175	-	97	35.366
ENSXETG00000004190	patz1	56	38.235	ENSXETG00000002717	-	99	38.235
ENSXETG00000004190	patz1	57	31.441	ENSXETG00000008801	znf628	96	31.441
ENSXETG00000004190	patz1	56	33.571	ENSXETG00000010512	-	99	33.571
ENSXETG00000004190	patz1	86	34.524	ENSXETG00000004510	gzf1	57	33.333
ENSXETG00000004190	patz1	74	39.326	ENSXETG00000021294	zbtb24	60	39.326
ENSXETG00000004190	patz1	60	34.483	ENSXETG00000030307	-	99	34.756
ENSXETG00000004190	patz1	53	36.066	ENSXETG00000001911	znf668	95	36.066
ENSXETG00000004190	patz1	53	33.520	ENSXETG00000033139	ZBTB16	55	33.520
ENSXETG00000004190	patz1	54	34.118	ENSXETG00000006490	znf350	85	34.118
ENSXETG00000004190	patz1	53	32.240	ENSXETG00000027536	znf574	58	32.240
ENSXETG00000004190	patz1	52	39.450	ENSXETG00000016091	e4f1	63	39.450
ENSXETG00000004190	patz1	54	32.558	ENSXETG00000023643	znf484	96	40.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000004190	patz1	100	72.319	ENSG00000100105	PATZ1	100	73.043	Homo_sapiens
ENSXETG00000004190	patz1	100	54.339	ENSAPOG00000018447	patz1	100	59.459	Acanthochromis_polyacanthus
ENSXETG00000004190	patz1	100	73.082	ENSAMEG00000007074	PATZ1	100	73.188	Ailuropoda_melanoleuca
ENSXETG00000004190	patz1	100	55.783	ENSACIG00000016779	patz1	100	55.036	Amphilophus_citrinellus
ENSXETG00000004190	patz1	100	57.558	ENSAPEG00000013354	patz1	100	57.558	Amphiprion_percula
ENSXETG00000004190	patz1	100	56.052	ENSATEG00000011260	patz1	100	59.853	Anabas_testudineus
ENSXETG00000004190	patz1	88	74.957	ENSAPLG00000003934	PATZ1	99	74.957	Anas_platyrhynchos
ENSXETG00000004190	patz1	100	72.319	ENSANAG00000029603	PATZ1	100	73.043	Aotus_nancymaae
ENSXETG00000004190	patz1	98	50.970	ENSAMXG00000002273	patz1	98	62.397	Astyanax_mexicanus
ENSXETG00000004190	patz1	100	72.319	ENSBTAG00000005478	PATZ1	100	73.043	Bos_taurus
ENSXETG00000004190	patz1	100	72.319	ENSCJAG00000010978	PATZ1	100	73.043	Callithrix_jacchus
ENSXETG00000004190	patz1	100	72.464	ENSCAFG00000013087	PATZ1	100	73.188	Canis_familiaris
ENSXETG00000004190	patz1	100	72.464	ENSCHIG00000020203	PATZ1	100	72.899	Capra_hircus
ENSXETG00000004190	patz1	100	72.464	ENSTSYG00000033183	PATZ1	100	73.188	Carlito_syrichta
ENSXETG00000004190	patz1	100	72.319	ENSCCAG00000028772	PATZ1	100	73.043	Cebus_capucinus
ENSXETG00000004190	patz1	100	73.043	ENSCATG00000006101	PATZ1	100	73.043	Cercocebus_atys
ENSXETG00000004190	patz1	100	72.238	ENSCPBG00000011277	PATZ1	100	72.965	Chrysemys_picta_bellii
ENSXETG00000004190	patz1	100	73.043	ENSCANG00000024972	PATZ1	100	73.043	Colobus_angolensis_palliatus
ENSXETG00000004190	patz1	100	70.725	ENSCGRG00001004071	Patz1	100	71.449	Cricetulus_griseus_chok1gshd
ENSXETG00000004190	patz1	93	71.827	ENSCGRG00000004814	Patz1	100	72.601	Cricetulus_griseus_crigri
ENSXETG00000004190	patz1	100	54.232	ENSCSEG00000001385	patz1	100	53.582	Cynoglossus_semilaevis
ENSXETG00000004190	patz1	100	56.503	ENSCVAG00000007684	patz1	100	56.023	Cyprinodon_variegatus
ENSXETG00000004190	patz1	99	54.386	ENSDARG00000076584	patz1	99	53.509	Danio_rerio
ENSXETG00000004190	patz1	89	71.659	ENSDNOG00000003183	PATZ1	100	72.142	Dasypus_novemcinctus
ENSXETG00000004190	patz1	100	72.464	ENSDORG00000023834	Patz1	100	73.188	Dipodomys_ordii
ENSXETG00000004190	patz1	100	72.174	ENSECAG00000025030	PATZ1	100	72.899	Equus_caballus
ENSXETG00000004190	patz1	100	60.073	ENSELUG00000002333	patz1	100	54.149	Esox_lucius
ENSXETG00000004190	patz1	100	72.464	ENSFCAG00000030253	PATZ1	100	73.188	Felis_catus
ENSXETG00000004190	patz1	88	75.427	ENSFALG00000007450	PATZ1	99	75.427	Ficedula_albicollis
ENSXETG00000004190	patz1	96	70.482	ENSFDAG00000005614	PATZ1	100	70.331	Fukomys_damarensis
ENSXETG00000004190	patz1	100	55.620	ENSFHEG00000014755	patz1	100	55.172	Fundulus_heteroclitus
ENSXETG00000004190	patz1	100	54.636	ENSGMOG00000001062	patz1	100	54.843	Gadus_morhua
ENSXETG00000004190	patz1	100	71.470	ENSGALG00000006934	PATZ1	100	72.190	Gallus_gallus
ENSXETG00000004190	patz1	100	54.143	ENSGAFG00000010053	patz1	100	53.067	Gambusia_affinis
ENSXETG00000004190	patz1	88	75.601	ENSGAGG00000003214	PATZ1	100	75.601	Gopherus_agassizii
ENSXETG00000004190	patz1	100	72.319	ENSGGOG00000017171	PATZ1	100	73.043	Gorilla_gorilla
ENSXETG00000004190	patz1	100	52.847	ENSHCOG00000017644	patz1	99	50.654	Hippocampus_comes
ENSXETG00000004190	patz1	98	52.941	ENSIPUG00000017653	patz1	98	57.765	Ictalurus_punctatus
ENSXETG00000004190	patz1	100	72.319	ENSSTOG00000020707	PATZ1	100	73.043	Ictidomys_tridecemlineatus
ENSXETG00000004190	patz1	100	71.553	ENSJJAG00000015259	Patz1	100	72.569	Jaculus_jaculus
ENSXETG00000004190	patz1	100	56.701	ENSKMAG00000008157	patz1	100	56.324	Kryptolebias_marmoratus
ENSXETG00000004190	patz1	100	74.298	ENSLAFG00000002317	PATZ1	100	74.298	Loxodonta_africana
ENSXETG00000004190	patz1	100	73.043	ENSMFAG00000040968	PATZ1	100	72.754	Macaca_fascicularis
ENSXETG00000004190	patz1	100	73.043	ENSMNEG00000037588	PATZ1	100	72.754	Macaca_nemestrina
ENSXETG00000004190	patz1	100	73.043	ENSMLEG00000030938	PATZ1	100	73.043	Mandrillus_leucophaeus
ENSXETG00000004190	patz1	100	56.577	ENSMAMG00000023652	patz1	100	55.446	Mastacembelus_armatus
ENSXETG00000004190	patz1	88	71.575	ENSMGAG00000008439	PATZ1	100	71.575	Meleagris_gallopavo
ENSXETG00000004190	patz1	100	72.464	ENSMAUG00000004129	Patz1	100	73.043	Mesocricetus_auratus
ENSXETG00000004190	patz1	100	72.464	ENSMICG00000005430	PATZ1	100	73.188	Microcebus_murinus
ENSXETG00000004190	patz1	100	72.174	ENSMOCG00000014488	Patz1	100	72.899	Microtus_ochrogaster
ENSXETG00000004190	patz1	79	54.511	ENSMMOG00000021679	patz1	100	53.947	Mola_mola
ENSXETG00000004190	patz1	100	57.143	ENSMALG00000021172	patz1	100	57.143	Monopterus_albus
ENSXETG00000004190	patz1	100	72.029	MGP_CAROLIEiJ_G0016007	Patz1	100	72.754	Mus_caroli
ENSXETG00000004190	patz1	100	72.029	ENSMUSG00000020453	Patz1	100	72.754	Mus_musculus
ENSXETG00000004190	patz1	100	72.029	MGP_PahariEiJ_G0016884	Patz1	100	72.754	Mus_pahari
ENSXETG00000004190	patz1	100	72.029	MGP_SPRETEiJ_G0016846	Patz1	100	72.754	Mus_spretus
ENSXETG00000004190	patz1	100	73.043	ENSMLUG00000009942	PATZ1	100	73.333	Myotis_lucifugus
ENSXETG00000004190	patz1	100	72.174	ENSNGAG00000010268	Patz1	100	72.899	Nannospalax_galili
ENSXETG00000004190	patz1	100	56.997	ENSNBRG00000016032	patz1	100	56.105	Neolamprologus_brichardi
ENSXETG00000004190	patz1	71	76.026	ENSMEUG00000016293	PATZ1	99	76.190	Notamacropus_eugenii
ENSXETG00000004190	patz1	100	72.754	ENSODEG00000003589	PATZ1	100	73.623	Octodon_degus
ENSXETG00000004190	patz1	100	53.561	ENSONIG00000004248	patz1	100	52.557	Oreochromis_niloticus
ENSXETG00000004190	patz1	100	72.344	ENSOANG00000014654	PATZ1	100	73.654	Ornithorhynchus_anatinus
ENSXETG00000004190	patz1	100	56.356	ENSORLG00020010937	patz1	100	55.478	Oryzias_latipes_hni
ENSXETG00000004190	patz1	100	56.436	ENSORLG00015007396	patz1	100	55.775	Oryzias_latipes_hsok
ENSXETG00000004190	patz1	100	53.680	ENSOMEG00000006636	patz1	100	52.882	Oryzias_melastigma
ENSXETG00000004190	patz1	100	72.174	ENSOGAG00000027905	PATZ1	100	72.899	Otolemur_garnettii
ENSXETG00000004190	patz1	100	72.319	ENSPPAG00000033227	PATZ1	100	73.043	Pan_paniscus
ENSXETG00000004190	patz1	100	72.464	ENSPPRG00000001573	PATZ1	100	73.188	Panthera_pardus
ENSXETG00000004190	patz1	88	76.231	ENSPTIG00000007937	PATZ1	90	76.231	Panthera_tigris_altaica
ENSXETG00000004190	patz1	100	72.319	ENSPTRG00000014268	PATZ1	100	73.043	Pan_troglodytes
ENSXETG00000004190	patz1	100	73.043	ENSPANG00000006821	PATZ1	100	73.043	Papio_anubis
ENSXETG00000004190	patz1	100	61.300	ENSPKIG00000019584	patz1	100	61.504	Paramormyrops_kingsleyae
ENSXETG00000004190	patz1	61	81.407	ENSPSIG00000011562	-	100	81.407	Pelodiscus_sinensis
ENSXETG00000004190	patz1	61	73.618	ENSPSIG00000016553	-	91	73.618	Pelodiscus_sinensis
ENSXETG00000004190	patz1	100	56.934	ENSPMGG00000010196	patz1	100	56.287	Periophthalmus_magnuspinnatus
ENSXETG00000004190	patz1	100	72.174	ENSPEMG00000005321	Patz1	100	72.899	Peromyscus_maniculatus_bairdii
ENSXETG00000004190	patz1	100	53.571	ENSPLAG00000010425	patz1	100	54.290	Poecilia_latipinna
ENSXETG00000004190	patz1	100	53.741	ENSPMEG00000000255	patz1	100	52.933	Poecilia_mexicana
ENSXETG00000004190	patz1	100	56.429	ENSPREG00000002440	patz1	100	55.207	Poecilia_reticulata
ENSXETG00000004190	patz1	100	72.174	ENSPPYG00000011732	PATZ1	100	72.899	Pongo_abelii
ENSXETG00000004190	patz1	100	72.464	ENSPCOG00000019729	PATZ1	100	73.188	Propithecus_coquereli
ENSXETG00000004190	patz1	100	72.464	ENSPVAG00000001749	PATZ1	100	73.188	Pteropus_vampyrus
ENSXETG00000004190	patz1	100	57.536	ENSPNYG00000013542	patz1	100	56.503	Pundamilia_nyererei
ENSXETG00000004190	patz1	87	56.860	ENSPNAG00000017222	patz1	99	55.702	Pygocentrus_nattereri
ENSXETG00000004190	patz1	100	73.043	ENSRBIG00000044231	PATZ1	100	73.043	Rhinopithecus_bieti
ENSXETG00000004190	patz1	100	73.043	ENSRROG00000037155	PATZ1	100	73.043	Rhinopithecus_roxellana
ENSXETG00000004190	patz1	100	72.319	ENSSBOG00000003894	PATZ1	100	73.043	Saimiri_boliviensis_boliviensis
ENSXETG00000004190	patz1	100	70.270	ENSSPUG00000015298	PATZ1	98	71.366	Sphenodon_punctatus
ENSXETG00000004190	patz1	88	75.897	ENSSSCG00000010027	PATZ1	100	75.897	Sus_scrofa
ENSXETG00000004190	patz1	100	56.286	ENSTRUG00000015366	patz1	100	56.348	Takifugu_rubripes
ENSXETG00000004190	patz1	100	72.319	ENSTTRG00000010279	PATZ1	100	73.043	Tursiops_truncatus
ENSXETG00000004190	patz1	100	67.826	ENSUAMG00000015014	PATZ1	100	68.551	Ursus_americanus
ENSXETG00000004190	patz1	100	54.155	ENSXMAG00000015531	patz1	100	53.429	Xiphophorus_maculatus