EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000004289 (Gene tree)
Gene ID: -
Gene Symbol: rab12
Alias: -
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 21175 bases
Position: chrGL172930.1:641138-662312
Accession: XB-GENE-492791
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000009340	MMR_HSR1	PF01926.23	2.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000009340	-	2853	XM_002937475	ENSXETP00000009340	312 (aa)	XP_002937521	F6PS71

Gene Model

Click here to download ENSXETG00000004289's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000004289's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000004289	rab12	50	34.810	ENSXETG00000005944	rab7b	78	34.810
ENSXETG00000004289	rab12	66	38.278	ENSXETG00000006639	rab11a	77	42.515
ENSXETG00000004289	rab12	66	39.320	ENSXETG00000011370	rab35	82	43.713
ENSXETG00000004289	rab12	58	37.778	ENSXETG00000002305	rab5a	81	37.778
ENSXETG00000004289	rab12	53	43.452	ENSXETG00000032443	RAB39B	78	43.452
ENSXETG00000004289	rab12	59	47.312	ENSXETG00000004556	rab18	79	49.091
ENSXETG00000004289	rab12	65	43.842	ENSXETG00000008055	rab3b	86	48.824
ENSXETG00000004289	rab12	66	38.679	ENSXETG00000021890	rab11b.2	75	42.515
ENSXETG00000004289	rab12	64	38.916	ENSXETG00000025484	rab11b.1	73	43.210
ENSXETG00000004289	rab12	67	38.863	ENSXETG00000026943	rab35	89	42.541
ENSXETG00000004289	rab12	50	31.847	ENSXETG00000005505	MRAS	80	32.143
ENSXETG00000004289	rab12	52	34.132	ENSXETG00000013345	rab9a	83	34.132
ENSXETG00000004289	rab12	53	38.462	ENSXETG00000016176	rab7a	81	38.462
ENSXETG00000004289	rab12	63	41.026	ENSXETG00000017184	rab2b	80	44.767
ENSXETG00000004289	rab12	54	36.686	ENSXETG00000020622	rab39a	82	36.686
ENSXETG00000004289	rab12	60	32.995	ENSXETG00000015712	rabl2b	81	33.854
ENSXETG00000004289	rab12	58	35.870	ENSXETG00000018133	rab9b	88	35.870
ENSXETG00000004289	rab12	60	36.842	ENSXETG00000016920	rab33b	75	38.728
ENSXETG00000004289	rab12	51	33.742	ENSXETG00000014257	mgc75872	81	33.742
ENSXETG00000004289	rab12	56	49.714	ENSXETG00000014011	rab1a	84	50.296
ENSXETG00000004289	rab12	51	37.736	ENSXETG00000023200	rab6a	84	37.736
ENSXETG00000004289	rab12	65	35.096	ENSXETG00000030938	rab41	75	39.623
ENSXETG00000004289	rab12	51	41.104	ENSXETG00000018183	rab33a	75	41.104
ENSXETG00000004289	rab12	54	46.471	ENSXETG00000002201	rab15	80	46.471
ENSXETG00000004289	rab12	52	52.174	ENSXETG00000013633	rab30	79	52.174
ENSXETG00000004289	rab12	54	40.000	ENSXETG00000020404	rab25	78	40.000
ENSXETG00000004289	rab12	50	36.250	ENSXETG00000019257	rab34	61	36.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000004289	rab12	80	87.649	ENSG00000206418	RAB12	100	88.306	Homo_sapiens
ENSXETG00000004289	rab12	71	86.607	ENSAMEG00000007452	RAB12	91	84.507	Ailuropoda_melanoleuca
ENSXETG00000004289	rab12	79	83.468	ENSACIG00000020616	rab12	93	83.406	Amphilophus_citrinellus
ENSXETG00000004289	rab12	72	88.393	ENSAOCG00000002130	rab12	86	88.208	Amphiprion_ocellaris
ENSXETG00000004289	rab12	72	88.393	ENSAPEG00000013255	rab12	86	88.208	Amphiprion_percula
ENSXETG00000004289	rab12	72	87.946	ENSATEG00000019683	rab12	87	88.208	Anabas_testudineus
ENSXETG00000004289	rab12	71	93.243	ENSACAG00000003360	RAB12	89	92.174	Anolis_carolinensis
ENSXETG00000004289	rab12	72	89.286	ENSACLG00000007696	rab12	86	89.151	Astatotilapia_calliptera
ENSXETG00000004289	rab12	79	83.600	ENSAMXG00000004882	rab12	93	82.684	Astyanax_mexicanus
ENSXETG00000004289	rab12	72	94.222	ENSBTAG00000010356	RAB12	94	92.641	Bos_taurus
ENSXETG00000004289	rab12	81	86.561	ENSCJAG00000015468	RAB12	87	76.589	Callithrix_jacchus
ENSXETG00000004289	rab12	72	95.111	ENSCAFG00020023721	RAB12	90	84.211	Canis_lupus_dingo
ENSXETG00000004289	rab12	72	94.222	ENSCHIG00000016103	RAB12	94	92.641	Capra_hircus
ENSXETG00000004289	rab12	67	95.238	ENSCPOG00000022689	RAB12	100	95.238	Cavia_porcellus
ENSXETG00000004289	rab12	72	94.667	ENSCCAG00000022862	RAB12	100	88.306	Cebus_capucinus
ENSXETG00000004289	rab12	72	94.667	ENSCATG00000037784	RAB12	99	90.377	Cercocebus_atys
ENSXETG00000004289	rab12	81	87.008	ENSCSAG00000017569	RAB12	73	87.008	Chlorocebus_sabaeus
ENSXETG00000004289	rab12	79	88.400	ENSCPBG00000028375	RAB12	100	88.400	Chrysemys_picta_bellii
ENSXETG00000004289	rab12	71	94.570	ENSCANG00000031453	RAB12	100	94.570	Colobus_angolensis_palliatus
ENSXETG00000004289	rab12	82	85.938	ENSCGRG00001006958	Rab12	86	85.938	Cricetulus_griseus_chok1gshd
ENSXETG00000004289	rab12	72	88.393	ENSCSEG00000016933	rab12	89	88.532	Cynoglossus_semilaevis
ENSXETG00000004289	rab12	72	88.839	ENSCVAG00000003539	rab12	96	83.122	Cyprinodon_variegatus
ENSXETG00000004289	rab12	79	81.048	ENSDARG00000089428	rab12	89	84.762	Danio_rerio
ENSXETG00000004289	rab12	75	88.889	ENSDNOG00000046064	RAB12	57	88.538	Dasypus_novemcinctus
ENSXETG00000004289	rab12	73	92.982	ENSDORG00000008920	Rab12	100	92.982	Dipodomys_ordii
ENSXETG00000004289	rab12	60	68.280	ENSEBUG00000006581	rab12	91	68.280	Eptatretus_burgeri
ENSXETG00000004289	rab12	72	95.111	ENSEASG00005002926	RAB12	86	85.441	Equus_asinus_asinus
ENSXETG00000004289	rab12	72	95.111	ENSECAG00000007384	RAB12	74	85.441	Equus_caballus
ENSXETG00000004289	rab12	79	81.855	ENSELUG00000007123	rab12	93	82.096	Esox_lucius
ENSXETG00000004289	rab12	72	95.111	ENSFCAG00000027710	RAB12	87	75.000	Felis_catus
ENSXETG00000004289	rab12	71	88.636	ENSFHEG00000004319	rab12	96	82.128	Fundulus_heteroclitus
ENSXETG00000004289	rab12	60	89.362	ENSGMOG00000012335	rab12	87	83.491	Gadus_morhua
ENSXETG00000004289	rab12	73	93.886	ENSGALG00000033608	RAB12	96	90.496	Gallus_gallus
ENSXETG00000004289	rab12	65	86.634	ENSGACG00000016639	rab12	100	80.531	Gasterosteus_aculeatus
ENSXETG00000004289	rab12	79	88.400	ENSGAGG00000007278	RAB12	100	88.400	Gopherus_agassizii
ENSXETG00000004289	rab12	72	89.286	ENSHBUG00000008497	rab12	86	89.151	Haplochromis_burtoni
ENSXETG00000004289	rab12	66	94.660	ENSHGLG00000006189	RAB12	86	93.665	Heterocephalus_glaber_female
ENSXETG00000004289	rab12	74	84.052	ENSHCOG00000012376	rab12	89	84.475	Hippocampus_comes
ENSXETG00000004289	rab12	79	81.452	ENSIPUG00000017401	rab12	93	80.786	Ictalurus_punctatus
ENSXETG00000004289	rab12	73	92.544	ENSSTOG00000025122	RAB12	98	94.619	Ictidomys_tridecemlineatus
ENSXETG00000004289	rab12	73	93.421	ENSJJAG00000019064	Rab12	99	93.421	Jaculus_jaculus
ENSXETG00000004289	rab12	75	84.979	ENSKMAG00000020056	rab12	89	85.514	Kryptolebias_marmoratus
ENSXETG00000004289	rab12	72	88.393	ENSLBEG00000013756	rab12	89	88.532	Labrus_bergylta
ENSXETG00000004289	rab12	88	80.727	ENSLACG00000010461	RAB12	92	87.013	Latimeria_chalumnae
ENSXETG00000004289	rab12	79	84.739	ENSLOCG00000002680	rab12	100	84.739	Lepisosteus_oculatus
ENSXETG00000004289	rab12	72	94.667	ENSMFAG00000043551	RAB12	93	93.074	Macaca_fascicularis
ENSXETG00000004289	rab12	72	94.667	ENSMNEG00000040853	RAB12	97	88.664	Macaca_nemestrina
ENSXETG00000004289	rab12	72	87.946	ENSMAMG00000006862	rab12	89	88.073	Mastacembelus_armatus
ENSXETG00000004289	rab12	72	89.286	ENSMZEG00005024316	rab12	86	89.151	Maylandia_zebra
ENSXETG00000004289	rab12	65	95.588	ENSMGAG00000009197	RAB12	91	96.757	Meleagris_gallopavo
ENSXETG00000004289	rab12	82	85.547	ENSMAUG00000008371	Rab12	85	85.547	Mesocricetus_auratus
ENSXETG00000004289	rab12	72	93.778	ENSMICG00000030661	RAB12	96	92.208	Microcebus_murinus
ENSXETG00000004289	rab12	71	94.091	ENSMOCG00000000452	Rab12	99	94.907	Microtus_ochrogaster
ENSXETG00000004289	rab12	83	87.308	ENSMODG00000021452	RAB12	79	85.075	Monodelphis_domestica
ENSXETG00000004289	rab12	73	85.153	ENSMALG00000015762	rab12	87	86.321	Monopterus_albus
ENSXETG00000004289	rab12	82	85.938	MGP_CAROLIEiJ_G0021839	Rab12	86	85.938	Mus_caroli
ENSXETG00000004289	rab12	82	85.938	ENSMUSG00000023460	Rab12	95	92.275	Mus_musculus
ENSXETG00000004289	rab12	82	85.938	MGP_PahariEiJ_G0020826	Rab12	95	92.275	Mus_pahari
ENSXETG00000004289	rab12	82	85.938	MGP_SPRETEiJ_G0022750	Rab12	86	85.938	Mus_spretus
ENSXETG00000004289	rab12	72	95.111	ENSMLUG00000002883	RAB12	100	88.710	Myotis_lucifugus
ENSXETG00000004289	rab12	73	92.544	ENSNGAG00000024103	-	97	92.544	Nannospalax_galili
ENSXETG00000004289	rab12	72	82.667	ENSNGAG00000019722	-	99	78.838	Nannospalax_galili
ENSXETG00000004289	rab12	72	89.286	ENSNBRG00000014428	rab12	86	89.151	Neolamprologus_brichardi
ENSXETG00000004289	rab12	72	94.667	ENSNLEG00000006939	RAB12	100	88.306	Nomascus_leucogenys
ENSXETG00000004289	rab12	79	89.516	ENSMEUG00000000493	RAB12	100	89.516	Notamacropus_eugenii
ENSXETG00000004289	rab12	66	95.146	ENSODEG00000006414	RAB12	100	94.545	Octodon_degus
ENSXETG00000004289	rab12	72	89.286	ENSONIG00000018469	rab12	86	89.151	Oreochromis_niloticus
ENSXETG00000004289	rab12	72	89.286	ENSORLG00000003902	rab12	87	89.151	Oryzias_latipes
ENSXETG00000004289	rab12	72	89.286	ENSORLG00020005131	rab12	87	89.151	Oryzias_latipes_hni
ENSXETG00000004289	rab12	72	89.286	ENSORLG00015007869	rab12	93	84.279	Oryzias_latipes_hsok
ENSXETG00000004289	rab12	72	89.286	ENSOMEG00000008191	rab12	87	89.151	Oryzias_melastigma
ENSXETG00000004289	rab12	67	95.714	ENSOGAG00000028002	RAB12	99	95.714	Otolemur_garnettii
ENSXETG00000004289	rab12	67	94.286	ENSOARG00000000728	RAB12	95	88.261	Ovis_aries
ENSXETG00000004289	rab12	66	95.652	ENSPPAG00000009152	RAB12	88	97.326	Pan_paniscus
ENSXETG00000004289	rab12	72	95.111	ENSPPRG00000024521	RAB12	100	88.710	Panthera_pardus
ENSXETG00000004289	rab12	72	94.667	ENSPTRG00000009853	RAB12	100	88.306	Pan_troglodytes
ENSXETG00000004289	rab12	79	87.903	ENSPANG00000009320	RAB12	100	87.903	Papio_anubis
ENSXETG00000004289	rab12	61	90.576	ENSPKIG00000008579	rab12	93	83.843	Paramormyrops_kingsleyae
ENSXETG00000004289	rab12	69	85.185	ENSPMGG00000001890	rab12	87	83.962	Periophthalmus_magnuspinnatus
ENSXETG00000004289	rab12	82	85.938	ENSPEMG00000021032	Rab12	86	85.938	Peromyscus_maniculatus_bairdii
ENSXETG00000004289	rab12	77	87.190	ENSPCIG00000010453	RAB12	66	85.075	Phascolarctos_cinereus
ENSXETG00000004289	rab12	79	81.855	ENSPFOG00000001579	rab12	95	82.128	Poecilia_formosa
ENSXETG00000004289	rab12	79	81.855	ENSPLAG00000013594	rab12	95	82.128	Poecilia_latipinna
ENSXETG00000004289	rab12	79	81.855	ENSPMEG00000010417	rab12	95	82.128	Poecilia_mexicana
ENSXETG00000004289	rab12	79	82.258	ENSPREG00000017487	rab12	95	82.553	Poecilia_reticulata
ENSXETG00000004289	rab12	74	87.931	ENSPPYG00000009015	-	89	75.896	Pongo_abelii
ENSXETG00000004289	rab12	72	95.111	ENSPCAG00000015007	RAB12	94	93.506	Procavia_capensis
ENSXETG00000004289	rab12	72	95.111	ENSPCOG00000019816	RAB12	100	88.710	Propithecus_coquereli
ENSXETG00000004289	rab12	72	94.667	ENSPVAG00000002757	RAB12	100	88.306	Pteropus_vampyrus
ENSXETG00000004289	rab12	72	89.286	ENSPNYG00000005654	rab12	86	89.151	Pundamilia_nyererei
ENSXETG00000004289	rab12	72	89.286	ENSPNYG00000023905	rab12	86	89.151	Pundamilia_nyererei
ENSXETG00000004289	rab12	72	87.556	ENSPNAG00000015031	rab12	93	81.818	Pygocentrus_nattereri
ENSXETG00000004289	rab12	69	90.233	ENSRNOG00000019295	Rab12	87	90.233	Rattus_norvegicus
ENSXETG00000004289	rab12	72	94.667	ENSRBIG00000028760	RAB12	99	93.074	Rhinopithecus_bieti
ENSXETG00000004289	rab12	73	93.421	ENSRROG00000019249	RAB12	95	93.421	Rhinopithecus_roxellana
ENSXETG00000004289	rab12	68	94.811	ENSSBOG00000021125	RAB12	90	80.932	Saimiri_boliviensis_boliviensis
ENSXETG00000004289	rab12	73	88.596	ENSSHAG00000001489	RAB12	100	88.596	Sarcophilus_harrisii
ENSXETG00000004289	rab12	71	87.273	ENSSMAG00000012678	rab12	89	87.615	Scophthalmus_maximus
ENSXETG00000004289	rab12	72	88.393	ENSSDUG00000008505	rab12	89	88.532	Seriola_dumerili
ENSXETG00000004289	rab12	72	88.393	ENSSLDG00000022239	rab12	89	88.532	Seriola_lalandi_dorsalis
ENSXETG00000004289	rab12	72	94.643	ENSSPUG00000003222	RAB12	96	90.871	Sphenodon_punctatus
ENSXETG00000004289	rab12	72	87.946	ENSSPAG00000010822	rab12	86	87.736	Stegastes_partitus
ENSXETG00000004289	rab12	72	95.556	ENSSSCG00000038026	RAB12	100	89.113	Sus_scrofa
ENSXETG00000004289	rab12	73	93.886	ENSTGUG00000009889	RAB12	96	90.496	Taeniopygia_guttata
ENSXETG00000004289	rab12	74	86.957	ENSTRUG00000024455	rab12	86	87.678	Takifugu_rubripes
ENSXETG00000004289	rab12	75	84.874	ENSTNIG00000014859	rab12	90	84.475	Tetraodon_nigroviridis
ENSXETG00000004289	rab12	71	93.274	ENSTTRG00000008711	RAB12	100	93.274	Tursiops_truncatus
ENSXETG00000004289	rab12	72	95.111	ENSUAMG00000018092	RAB12	100	88.710	Ursus_americanus
ENSXETG00000004289	rab12	69	96.296	ENSVVUG00000011748	RAB12	97	96.296	Vulpes_vulpes
ENSXETG00000004289	rab12	79	81.452	ENSXCOG00000019310	rab12	93	81.659	Xiphophorus_couchianus
ENSXETG00000004289	rab12	79	81.855	ENSXMAG00000023617	rab12	95	82.128	Xiphophorus_maculatus