EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000004369 (Gene tree)
Gene ID: -
Gene Symbol: rad54l
Alias: -
Full Name: RAD54 like
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 13538 bases
Position: chrGL172637.1:1991738-2005275
Accession: XB-GENE-979988
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000009513	ResIII	PF04851.15	1.4e-09	1	1
ENSXETP00000061309	ResIII	PF04851.15	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000009513	-	2139	-	ENSXETP00000009513	712 (aa)	-	F7DA16
ENSXETT00000062763	-	2154	-	ENSXETP00000061309	717 (aa)	-	F6VJ34

Gene Model

Click here to download ENSXETG00000004369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000004369's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000004369	rad54l	93	34.233	ENSXETG00000025924	rad54b	86	34.192

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000004369	rad54l	99	77.747	ENSG00000085999	RAD54L	100	89.333	Homo_sapiens
ENSXETG00000004369	rad54l	99	73.315	ENSAPOG00000011643	rad54l	96	73.315	Acanthochromis_polyacanthus
ENSXETG00000004369	rad54l	99	77.608	ENSAMEG00000013902	RAD54L	96	77.608	Ailuropoda_melanoleuca
ENSXETG00000004369	rad54l	99	74.825	ENSACIG00000001939	rad54l	96	74.825	Amphilophus_citrinellus
ENSXETG00000004369	rad54l	99	76.264	ENSAOCG00000017576	rad54l	96	76.264	Amphiprion_ocellaris
ENSXETG00000004369	rad54l	99	76.124	ENSAPEG00000020658	rad54l	98	76.124	Amphiprion_percula
ENSXETG00000004369	rad54l	98	76.879	ENSATEG00000006767	rad54l	100	76.879	Anabas_testudineus
ENSXETG00000004369	rad54l	98	82.621	ENSAPLG00000006389	RAD54L	99	82.621	Anas_platyrhynchos
ENSXETG00000004369	rad54l	99	80.726	ENSACAG00000002312	RAD54L	96	80.726	Anolis_carolinensis
ENSXETG00000004369	rad54l	99	78.194	ENSANAG00000035439	RAD54L	96	78.194	Aotus_nancymaae
ENSXETG00000004369	rad54l	99	75.035	ENSACLG00000018711	rad54l	96	75.035	Astatotilapia_calliptera
ENSXETG00000004369	rad54l	99	78.261	ENSAMXG00000012777	rad54l	96	78.261	Astyanax_mexicanus
ENSXETG00000004369	rad54l	99	78.103	ENSBTAG00000019901	RAD54L	95	78.103	Bos_taurus
ENSXETG00000004369	rad54l	97	55.286	WBGene00004298	rad-54	84	54.429	Caenorhabditis_elegans
ENSXETG00000004369	rad54l	99	75.728	ENSCJAG00000021080	RAD54L	91	75.728	Callithrix_jacchus
ENSXETG00000004369	rad54l	99	77.886	ENSCAFG00000004272	RAD54L	96	77.886	Canis_familiaris
ENSXETG00000004369	rad54l	99	77.886	ENSCAFG00020015066	RAD54L	96	77.886	Canis_lupus_dingo
ENSXETG00000004369	rad54l	99	77.964	ENSCHIG00000020118	RAD54L	95	77.964	Capra_hircus
ENSXETG00000004369	rad54l	99	76.634	ENSTSYG00000002032	RAD54L	96	76.634	Carlito_syrichta
ENSXETG00000004369	rad54l	99	78.581	ENSCPOG00000006768	RAD54L	96	78.581	Cavia_porcellus
ENSXETG00000004369	rad54l	99	78.611	ENSCCAG00000025783	RAD54L	96	78.611	Cebus_capucinus
ENSXETG00000004369	rad54l	99	78.025	ENSCATG00000030589	RAD54L	96	78.025	Cercocebus_atys
ENSXETG00000004369	rad54l	99	78.581	ENSCLAG00000004645	RAD54L	96	78.581	Chinchilla_lanigera
ENSXETG00000004369	rad54l	99	77.886	ENSCSAG00000001229	RAD54L	96	77.886	Chlorocebus_sabaeus
ENSXETG00000004369	rad54l	99	80.866	ENSCPBG00000005675	RAD54L	96	80.866	Chrysemys_picta_bellii
ENSXETG00000004369	rad54l	97	60.739	ENSCING00000024456	-	95	60.734	Ciona_intestinalis
ENSXETG00000004369	rad54l	97	60.724	ENSCSAVG00000010859	-	94	60.779	Ciona_savignyi
ENSXETG00000004369	rad54l	99	78.164	ENSCANG00000034891	RAD54L	96	78.164	Colobus_angolensis_palliatus
ENSXETG00000004369	rad54l	99	77.608	ENSCGRG00001014807	Rad54l	96	77.608	Cricetulus_griseus_chok1gshd
ENSXETG00000004369	rad54l	99	77.608	ENSCGRG00000016038	Rad54l	96	77.608	Cricetulus_griseus_crigri
ENSXETG00000004369	rad54l	94	78.287	ENSCSEG00000001983	rad54l	93	78.287	Cynoglossus_semilaevis
ENSXETG00000004369	rad54l	74	84.211	ENSCVAG00000019561	rad54l	93	84.211	Cyprinodon_variegatus
ENSXETG00000004369	rad54l	99	76.945	ENSDARG00000018623	rad54l	95	76.945	Danio_rerio
ENSXETG00000004369	rad54l	99	77.747	ENSDNOG00000003395	RAD54L	96	77.747	Dasypus_novemcinctus
ENSXETG00000004369	rad54l	95	76.308	ENSDORG00000002632	Rad54l	92	75.771	Dipodomys_ordii
ENSXETG00000004369	rad54l	94	54.332	FBgn0002989	okr	86	54.332	Drosophila_melanogaster
ENSXETG00000004369	rad54l	77	74.797	ENSETEG00000000550	RAD54L	74	76.423	Echinops_telfairi
ENSXETG00000004369	rad54l	99	78.090	ENSEASG00005004511	RAD54L	97	77.974	Equus_asinus_asinus
ENSXETG00000004369	rad54l	99	77.747	ENSECAG00000008760	RAD54L	96	78.940	Equus_caballus
ENSXETG00000004369	rad54l	94	78.645	ENSEEUG00000008113	RAD54L	90	78.645	Erinaceus_europaeus
ENSXETG00000004369	rad54l	98	77.904	ENSELUG00000002295	rad54l	94	77.904	Esox_lucius
ENSXETG00000004369	rad54l	99	77.608	ENSFCAG00000003444	RAD54L	96	77.608	Felis_catus
ENSXETG00000004369	rad54l	99	81.373	ENSFALG00000009480	RAD54L	96	81.373	Ficedula_albicollis
ENSXETG00000004369	rad54l	99	77.747	ENSFDAG00000007806	RAD54L	96	77.747	Fukomys_damarensis
ENSXETG00000004369	rad54l	65	68.026	ENSFHEG00000009824	rad54l	80	68.026	Fundulus_heteroclitus
ENSXETG00000004369	rad54l	99	75.456	ENSGMOG00000014568	rad54l	97	75.456	Gadus_morhua
ENSXETG00000004369	rad54l	99	81.232	ENSGALG00000010356	RAD54L	88	81.232	Gallus_gallus
ENSXETG00000004369	rad54l	91	75.193	ENSGAFG00000011110	rad54l	96	75.193	Gambusia_affinis
ENSXETG00000004369	rad54l	99	75.000	ENSGACG00000003111	rad54l	94	75.000	Gasterosteus_aculeatus
ENSXETG00000004369	rad54l	99	80.587	ENSGAGG00000014089	RAD54L	92	80.587	Gopherus_agassizii
ENSXETG00000004369	rad54l	99	77.608	ENSGGOG00000010602	RAD54L	96	77.608	Gorilla_gorilla
ENSXETG00000004369	rad54l	99	75.035	ENSHBUG00000007793	rad54l	96	75.035	Haplochromis_burtoni
ENSXETG00000004369	rad54l	99	78.025	ENSHGLG00000000753	RAD54L	96	78.025	Heterocephalus_glaber_female
ENSXETG00000004369	rad54l	99	78.025	ENSHGLG00100016987	RAD54L	96	78.025	Heterocephalus_glaber_male
ENSXETG00000004369	rad54l	99	76.096	ENSIPUG00000015999	rad54l	100	76.286	Ictalurus_punctatus
ENSXETG00000004369	rad54l	99	77.500	ENSSTOG00000029125	RAD54L	96	77.500	Ictidomys_tridecemlineatus
ENSXETG00000004369	rad54l	100	64.722	ENSJJAG00000000235	-	95	64.583	Jaculus_jaculus
ENSXETG00000004369	rad54l	100	74.477	ENSKMAG00000009944	rad54l	97	74.477	Kryptolebias_marmoratus
ENSXETG00000004369	rad54l	99	76.404	ENSLBEG00000014617	rad54l	97	76.889	Labrus_bergylta
ENSXETG00000004369	rad54l	100	76.151	ENSLOCG00000004144	rad54l	96	77.280	Lepisosteus_oculatus
ENSXETG00000004369	rad54l	99	77.051	ENSLAFG00000007583	RAD54L	96	77.330	Loxodonta_africana
ENSXETG00000004369	rad54l	99	78.025	ENSMFAG00000031241	RAD54L	96	78.025	Macaca_fascicularis
ENSXETG00000004369	rad54l	99	78.025	ENSMMUG00000011568	RAD54L	96	78.025	Macaca_mulatta
ENSXETG00000004369	rad54l	99	77.886	ENSMNEG00000038562	RAD54L	96	77.886	Macaca_nemestrina
ENSXETG00000004369	rad54l	99	78.025	ENSMLEG00000038145	RAD54L	96	78.025	Mandrillus_leucophaeus
ENSXETG00000004369	rad54l	99	76.056	ENSMAMG00000022180	rad54l	99	77.059	Mastacembelus_armatus
ENSXETG00000004369	rad54l	99	75.035	ENSMZEG00005018081	rad54l	96	75.035	Maylandia_zebra
ENSXETG00000004369	rad54l	99	81.092	ENSMGAG00000010634	RAD54L	96	81.092	Meleagris_gallopavo
ENSXETG00000004369	rad54l	99	77.608	ENSMAUG00000020076	Rad54l	96	77.608	Mesocricetus_auratus
ENSXETG00000004369	rad54l	99	78.581	ENSMICG00000003266	RAD54L	96	78.581	Microcebus_murinus
ENSXETG00000004369	rad54l	99	77.469	ENSMOCG00000001778	Rad54l	96	77.469	Microtus_ochrogaster
ENSXETG00000004369	rad54l	99	76.596	ENSMALG00000021148	rad54l	95	76.596	Monopterus_albus
ENSXETG00000004369	rad54l	99	73.243	MGP_CAROLIEiJ_G0026325	Rad54l	96	73.243	Mus_caroli
ENSXETG00000004369	rad54l	99	77.608	ENSMUSG00000028702	Rad54l	96	77.608	Mus_musculus
ENSXETG00000004369	rad54l	99	77.469	MGP_PahariEiJ_G0028657	Rad54l	96	77.469	Mus_pahari
ENSXETG00000004369	rad54l	99	77.747	MGP_SPRETEiJ_G0027297	Rad54l	96	77.747	Mus_spretus
ENSXETG00000004369	rad54l	99	77.639	ENSMPUG00000012883	RAD54L	96	77.639	Mustela_putorius_furo
ENSXETG00000004369	rad54l	99	78.025	ENSMLUG00000003763	RAD54L	96	78.025	Myotis_lucifugus
ENSXETG00000004369	rad54l	99	76.912	ENSNGAG00000024213	Rad54l	96	76.912	Nannospalax_galili
ENSXETG00000004369	rad54l	99	77.917	ENSNLEG00000016548	RAD54L	96	77.917	Nomascus_leucogenys
ENSXETG00000004369	rad54l	94	79.080	ENSMEUG00000006793	RAD54L	100	79.080	Notamacropus_eugenii
ENSXETG00000004369	rad54l	89	84.321	ENSOPRG00000016016	RAD54L	86	84.321	Ochotona_princeps
ENSXETG00000004369	rad54l	99	77.747	ENSODEG00000008519	RAD54L	96	77.747	Octodon_degus
ENSXETG00000004369	rad54l	99	75.175	ENSONIG00000007659	rad54l	96	75.000	Oreochromis_niloticus
ENSXETG00000004369	rad54l	99	78.442	ENSOCUG00000005229	RAD54L	96	78.442	Oryctolagus_cuniculus
ENSXETG00000004369	rad54l	97	76.012	ENSORLG00000002958	rad54l	96	75.035	Oryzias_latipes
ENSXETG00000004369	rad54l	99	75.035	ENSORLG00020006554	rad54l	99	75.988	Oryzias_latipes_hni
ENSXETG00000004369	rad54l	97	76.012	ENSORLG00015002907	rad54l	96	74.930	Oryzias_latipes_hsok
ENSXETG00000004369	rad54l	99	75.140	ENSOMEG00000007770	rad54l	97	75.140	Oryzias_melastigma
ENSXETG00000004369	rad54l	99	77.577	ENSOARG00000002264	RAD54L	95	77.577	Ovis_aries
ENSXETG00000004369	rad54l	99	77.886	ENSPPAG00000031222	RAD54L	96	77.886	Pan_paniscus
ENSXETG00000004369	rad54l	99	77.608	ENSPPRG00000010317	RAD54L	96	77.608	Panthera_pardus
ENSXETG00000004369	rad54l	99	77.608	ENSPTIG00000012200	RAD54L	96	77.608	Panthera_tigris_altaica
ENSXETG00000004369	rad54l	99	77.608	ENSPTRG00000000689	RAD54L	96	77.608	Pan_troglodytes
ENSXETG00000004369	rad54l	99	78.025	ENSPANG00000016295	RAD54L	96	78.025	Papio_anubis
ENSXETG00000004369	rad54l	97	72.597	ENSPKIG00000016172	rad54l	94	72.597	Paramormyrops_kingsleyae
ENSXETG00000004369	rad54l	99	81.285	ENSPSIG00000003258	RAD54L	97	81.285	Pelodiscus_sinensis
ENSXETG00000004369	rad54l	99	70.909	ENSPMGG00000016335	rad54l	96	70.909	Periophthalmus_magnuspinnatus
ENSXETG00000004369	rad54l	99	77.469	ENSPEMG00000011422	Rad54l	96	77.469	Peromyscus_maniculatus_bairdii
ENSXETG00000004369	rad54l	99	67.364	ENSPMAG00000007719	rad54l	96	67.364	Petromyzon_marinus
ENSXETG00000004369	rad54l	99	79.050	ENSPCIG00000029032	RAD54L	96	79.050	Phascolarctos_cinereus
ENSXETG00000004369	rad54l	89	76.213	ENSPFOG00000013732	rad54l	100	76.213	Poecilia_formosa
ENSXETG00000004369	rad54l	85	74.879	ENSPLAG00000023416	rad54l	99	74.879	Poecilia_latipinna
ENSXETG00000004369	rad54l	91	75.347	ENSPMEG00000008299	rad54l	96	75.347	Poecilia_mexicana
ENSXETG00000004369	rad54l	99	73.986	ENSPREG00000019955	rad54l	96	73.986	Poecilia_reticulata
ENSXETG00000004369	rad54l	99	65.278	ENSPPYG00000001398	RAD54L	95	65.278	Pongo_abelii
ENSXETG00000004369	rad54l	72	83.495	ENSPCAG00000005323	RAD54L	70	83.495	Procavia_capensis
ENSXETG00000004369	rad54l	99	78.442	ENSPCOG00000015423	RAD54L	96	78.442	Propithecus_coquereli
ENSXETG00000004369	rad54l	95	74.388	ENSPNYG00000002942	rad54l	96	74.388	Pundamilia_nyererei
ENSXETG00000004369	rad54l	99	77.700	ENSPNAG00000012483	rad54l	96	77.700	Pygocentrus_nattereri
ENSXETG00000004369	rad54l	99	77.051	ENSRNOG00000013148	Rad54l	96	77.051	Rattus_norvegicus
ENSXETG00000004369	rad54l	99	78.164	ENSRBIG00000043495	RAD54L	96	78.164	Rhinopithecus_bieti
ENSXETG00000004369	rad54l	99	78.164	ENSRROG00000020844	RAD54L	96	78.164	Rhinopithecus_roxellana
ENSXETG00000004369	rad54l	80	45.820	YGL163C	RAD54	67	45.977	Saccharomyces_cerevisiae
ENSXETG00000004369	rad54l	99	78.472	ENSSBOG00000024672	RAD54L	96	78.472	Saimiri_boliviensis_boliviensis
ENSXETG00000004369	rad54l	100	78.999	ENSSHAG00000000110	RAD54L	96	78.999	Sarcophilus_harrisii
ENSXETG00000004369	rad54l	99	76.858	ENSSDUG00000019147	rad54l	96	76.858	Seriola_dumerili
ENSXETG00000004369	rad54l	99	76.718	ENSSLDG00000012330	rad54l	100	75.637	Seriola_lalandi_dorsalis
ENSXETG00000004369	rad54l	78	80.396	ENSSARG00000006689	RAD54L	89	80.396	Sorex_araneus
ENSXETG00000004369	rad54l	99	76.084	ENSSPAG00000011016	rad54l	96	76.084	Stegastes_partitus
ENSXETG00000004369	rad54l	99	77.608	ENSSSCG00000003905	RAD54L	96	77.608	Sus_scrofa
ENSXETG00000004369	rad54l	99	81.145	ENSTGUG00000008233	RAD54L	96	81.145	Taeniopygia_guttata
ENSXETG00000004369	rad54l	100	72.841	ENSTRUG00000008410	rad54l	99	72.841	Takifugu_rubripes
ENSXETG00000004369	rad54l	99	71.508	ENSTNIG00000004716	rad54l	97	71.508	Tetraodon_nigroviridis
ENSXETG00000004369	rad54l	94	75.994	ENSTTRG00000006315	RAD54L	90	75.994	Tursiops_truncatus
ENSXETG00000004369	rad54l	99	77.330	ENSUAMG00000011824	RAD54L	96	77.330	Ursus_americanus
ENSXETG00000004369	rad54l	99	76.356	ENSUMAG00000023603	RAD54L	96	76.356	Ursus_maritimus
ENSXETG00000004369	rad54l	99	77.886	ENSVVUG00000007201	RAD54L	96	77.886	Vulpes_vulpes
ENSXETG00000004369	rad54l	53	68.519	ENSXCOG00000016028	rad54l	82	68.519	Xiphophorus_couchianus