EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000004501 (Gene tree)
Gene ID: -
Gene Symbol: trmt6
Alias: -
Full Name: Xenopus tropicalis tRNA methyltransferase 6 (trmt6)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 22366 bases
Position: chrGL172884.1:27497-49862
Accession: NM_001005034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000009779	Gcd10p	PF04189.13	8.3e-68	1	1
ENSXETP00000063225	Gcd10p	PF04189.13	5.7e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000009779	-	1746	-	ENSXETP00000009779	483 (aa)	-	F7CVR0
ENSXETT00000064800	-	1749	-	ENSXETP00000063225	488 (aa)	-	F7CW52

Gene Model

Click here to download ENSXETG00000004501's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000004501's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000004501	trmt6	98	65.975	ENSG00000089195	TRMT6	96	65.975	Homo_sapiens
ENSXETG00000004501	trmt6	98	58.750	ENSAPOG00000008036	trmt6	98	59.916	Acanthochromis_polyacanthus
ENSXETG00000004501	trmt6	98	66.392	ENSAMEG00000010635	TRMT6	96	66.392	Ailuropoda_melanoleuca
ENSXETG00000004501	trmt6	98	56.237	ENSACIG00000004608	trmt6	97	56.237	Amphilophus_citrinellus
ENSXETG00000004501	trmt6	98	58.351	ENSAOCG00000024322	trmt6	97	58.774	Amphiprion_ocellaris
ENSXETG00000004501	trmt6	98	59.539	ENSAPEG00000017334	trmt6	98	59.539	Amphiprion_percula
ENSXETG00000004501	trmt6	93	58.606	ENSATEG00000018498	trmt6	98	57.849	Anabas_testudineus
ENSXETG00000004501	trmt6	93	66.885	ENSAPLG00000007761	TRMT6	99	66.885	Anas_platyrhynchos
ENSXETG00000004501	trmt6	99	66.049	ENSACAG00000000575	TRMT6	99	66.049	Anolis_carolinensis
ENSXETG00000004501	trmt6	98	66.183	ENSANAG00000021260	TRMT6	96	66.183	Aotus_nancymaae
ENSXETG00000004501	trmt6	98	57.950	ENSACLG00000026034	trmt6	96	57.950	Astatotilapia_calliptera
ENSXETG00000004501	trmt6	97	57.773	ENSAMXG00000017116	trmt6	95	58.774	Astyanax_mexicanus
ENSXETG00000004501	trmt6	98	66.598	ENSBTAG00000001314	TRMT6	96	66.598	Bos_taurus
ENSXETG00000004501	trmt6	98	66.390	ENSCJAG00000021296	TRMT6	96	66.390	Callithrix_jacchus
ENSXETG00000004501	trmt6	98	66.320	ENSCAFG00000005969	TRMT6	96	66.320	Canis_familiaris
ENSXETG00000004501	trmt6	98	66.528	ENSCAFG00020000777	TRMT6	96	66.528	Canis_lupus_dingo
ENSXETG00000004501	trmt6	98	66.805	ENSCHIG00000010338	TRMT6	96	66.805	Capra_hircus
ENSXETG00000004501	trmt6	98	66.944	ENSTSYG00000004286	TRMT6	96	66.944	Carlito_syrichta
ENSXETG00000004501	trmt6	85	63.636	ENSCAPG00000015467	TRMT6	93	63.636	Cavia_aperea
ENSXETG00000004501	trmt6	98	64.490	ENSCPOG00000013809	TRMT6	96	64.490	Cavia_porcellus
ENSXETG00000004501	trmt6	98	66.392	ENSCCAG00000026939	TRMT6	96	66.392	Cebus_capucinus
ENSXETG00000004501	trmt6	98	66.390	ENSCATG00000041111	TRMT6	96	66.390	Cercocebus_atys
ENSXETG00000004501	trmt6	99	63.253	ENSCLAG00000013978	TRMT6	99	63.253	Chinchilla_lanigera
ENSXETG00000004501	trmt6	98	66.390	ENSCSAG00000013461	TRMT6	96	66.390	Chlorocebus_sabaeus
ENSXETG00000004501	trmt6	76	54.667	ENSCHOG00000012537	TRMT6	75	54.667	Choloepus_hoffmanni
ENSXETG00000004501	trmt6	98	67.155	ENSCPBG00000023406	TRMT6	98	67.568	Chrysemys_picta_bellii
ENSXETG00000004501	trmt6	90	34.066	ENSCING00000002472	-	97	34.066	Ciona_intestinalis
ENSXETG00000004501	trmt6	92	37.916	ENSCSAVG00000001680	-	99	37.916	Ciona_savignyi
ENSXETG00000004501	trmt6	98	65.975	ENSCANG00000002381	TRMT6	96	65.975	Colobus_angolensis_palliatus
ENSXETG00000004501	trmt6	96	65.966	ENSCGRG00001003385	Trmt6	95	65.966	Cricetulus_griseus_chok1gshd
ENSXETG00000004501	trmt6	96	65.966	ENSCGRG00000006540	Trmt6	95	65.966	Cricetulus_griseus_crigri
ENSXETG00000004501	trmt6	97	62.047	ENSCSEG00000002228	trmt6	96	61.752	Cynoglossus_semilaevis
ENSXETG00000004501	trmt6	98	57.353	ENSCVAG00000000341	trmt6	98	57.531	Cyprinodon_variegatus
ENSXETG00000004501	trmt6	100	58.740	ENSDARG00000042344	trmt6	99	58.740	Danio_rerio
ENSXETG00000004501	trmt6	98	64.185	ENSDNOG00000012785	TRMT6	99	62.768	Dasypus_novemcinctus
ENSXETG00000004501	trmt6	98	65.567	ENSDORG00000006458	Trmt6	97	65.567	Dipodomys_ordii
ENSXETG00000004501	trmt6	63	39.172	ENSETEG00000017282	-	93	39.365	Echinops_telfairi
ENSXETG00000004501	trmt6	52	76.515	ENSETEG00000003490	-	52	76.515	Echinops_telfairi
ENSXETG00000004501	trmt6	98	66.183	ENSEASG00005001411	TRMT6	97	66.183	Equus_asinus_asinus
ENSXETG00000004501	trmt6	98	65.975	ENSECAG00000023914	TRMT6	96	65.975	Equus_caballus
ENSXETG00000004501	trmt6	97	64.938	ENSEEUG00000006635	TRMT6	96	64.938	Erinaceus_europaeus
ENSXETG00000004501	trmt6	99	58.230	ENSELUG00000013378	trmt6	81	58.230	Esox_lucius
ENSXETG00000004501	trmt6	98	65.918	ENSFCAG00000003102	TRMT6	96	66.390	Felis_catus
ENSXETG00000004501	trmt6	92	65.188	ENSFALG00000013575	TRMT6	98	66.741	Ficedula_albicollis
ENSXETG00000004501	trmt6	98	64.256	ENSFDAG00000015117	TRMT6	96	64.256	Fukomys_damarensis
ENSXETG00000004501	trmt6	97	56.118	ENSFHEG00000019957	trmt6	97	56.118	Fundulus_heteroclitus
ENSXETG00000004501	trmt6	83	63.878	ENSGMOG00000011059	trmt6	98	63.878	Gadus_morhua
ENSXETG00000004501	trmt6	98	66.597	ENSGALG00000009169	TRMT6	98	66.597	Gallus_gallus
ENSXETG00000004501	trmt6	98	57.203	ENSGAFG00000008618	trmt6	97	57.203	Gambusia_affinis
ENSXETG00000004501	trmt6	99	56.198	ENSGACG00000012471	trmt6	99	55.992	Gasterosteus_aculeatus
ENSXETG00000004501	trmt6	98	66.946	ENSGAGG00000008464	TRMT6	99	67.473	Gopherus_agassizii
ENSXETG00000004501	trmt6	98	65.975	ENSGGOG00000008597	TRMT6	96	65.975	Gorilla_gorilla
ENSXETG00000004501	trmt6	98	57.950	ENSHBUG00000016631	trmt6	97	57.950	Haplochromis_burtoni
ENSXETG00000004501	trmt6	98	65.768	ENSHGLG00000015405	TRMT6	96	65.768	Heterocephalus_glaber_female
ENSXETG00000004501	trmt6	98	65.768	ENSHGLG00100004120	TRMT6	96	65.768	Heterocephalus_glaber_male
ENSXETG00000004501	trmt6	99	55.187	ENSHCOG00000000118	trmt6	97	54.658	Hippocampus_comes
ENSXETG00000004501	trmt6	97	59.619	ENSIPUG00000019365	trmt6	98	59.619	Ictalurus_punctatus
ENSXETG00000004501	trmt6	98	65.361	ENSSTOG00000006863	TRMT6	96	65.361	Ictidomys_tridecemlineatus
ENSXETG00000004501	trmt6	97	64.682	ENSJJAG00000007315	Trmt6	95	64.682	Jaculus_jaculus
ENSXETG00000004501	trmt6	97	57.749	ENSKMAG00000001295	trmt6	97	57.928	Kryptolebias_marmoratus
ENSXETG00000004501	trmt6	99	57.851	ENSLBEG00000025654	trmt6	99	57.851	Labrus_bergylta
ENSXETG00000004501	trmt6	98	66.247	ENSLACG00000016478	TRMT6	96	66.247	Latimeria_chalumnae
ENSXETG00000004501	trmt6	97	63.559	ENSLOCG00000016451	trmt6	97	63.559	Lepisosteus_oculatus
ENSXETG00000004501	trmt6	98	65.975	ENSLAFG00000032216	TRMT6	96	65.975	Loxodonta_africana
ENSXETG00000004501	trmt6	98	66.390	ENSMFAG00000044360	TRMT6	96	66.390	Macaca_fascicularis
ENSXETG00000004501	trmt6	98	66.390	ENSMMUG00000013728	TRMT6	96	66.390	Macaca_mulatta
ENSXETG00000004501	trmt6	98	66.390	ENSMNEG00000041831	TRMT6	96	66.390	Macaca_nemestrina
ENSXETG00000004501	trmt6	98	66.390	ENSMLEG00000040762	TRMT6	96	66.390	Mandrillus_leucophaeus
ENSXETG00000004501	trmt6	98	56.442	ENSMAMG00000012101	trmt6	98	58.932	Mastacembelus_armatus
ENSXETG00000004501	trmt6	98	57.950	ENSMZEG00005010771	trmt6	96	57.950	Maylandia_zebra
ENSXETG00000004501	trmt6	97	66.596	ENSMGAG00000007678	TRMT6	97	66.596	Meleagris_gallopavo
ENSXETG00000004501	trmt6	96	65.966	ENSMAUG00000008719	Trmt6	95	65.966	Mesocricetus_auratus
ENSXETG00000004501	trmt6	98	66.250	ENSMICG00000011626	TRMT6	96	66.250	Microcebus_murinus
ENSXETG00000004501	trmt6	96	65.546	ENSMOCG00000022320	Trmt6	95	65.546	Microtus_ochrogaster
ENSXETG00000004501	trmt6	99	53.926	ENSMMOG00000004412	trmt6	99	53.926	Mola_mola
ENSXETG00000004501	trmt6	100	65.510	ENSMODG00000003784	TRMT6	99	65.510	Monodelphis_domestica
ENSXETG00000004501	trmt6	99	52.881	ENSMALG00000018140	trmt6	99	52.881	Monopterus_albus
ENSXETG00000004501	trmt6	98	64.634	MGP_CAROLIEiJ_G0024344	Trmt6	96	64.682	Mus_caroli
ENSXETG00000004501	trmt6	98	64.898	ENSMUSG00000037376	Trmt6	96	64.898	Mus_musculus
ENSXETG00000004501	trmt6	98	65.975	MGP_PahariEiJ_G0025789	Trmt6	96	65.975	Mus_pahari
ENSXETG00000004501	trmt6	98	64.898	MGP_SPRETEiJ_G0025264	Trmt6	96	64.898	Mus_spretus
ENSXETG00000004501	trmt6	89	65.217	ENSMPUG00000006317	TRMT6	93	65.217	Mustela_putorius_furo
ENSXETG00000004501	trmt6	98	67.152	ENSMLUG00000006491	TRMT6	96	67.152	Myotis_lucifugus
ENSXETG00000004501	trmt6	97	64.509	ENSNGAG00000015251	Trmt6	95	64.509	Nannospalax_galili
ENSXETG00000004501	trmt6	98	54.123	ENSNBRG00000020261	trmt6	97	54.123	Neolamprologus_brichardi
ENSXETG00000004501	trmt6	98	66.183	ENSNLEG00000013957	TRMT6	96	66.183	Nomascus_leucogenys
ENSXETG00000004501	trmt6	87	66.033	ENSMEUG00000009179	TRMT6	99	66.033	Notamacropus_eugenii
ENSXETG00000004501	trmt6	99	64.826	ENSOPRG00000008564	TRMT6	99	64.826	Ochotona_princeps
ENSXETG00000004501	trmt6	98	65.361	ENSODEG00000005657	TRMT6	99	63.492	Octodon_degus
ENSXETG00000004501	trmt6	98	58.071	ENSONIG00000000968	trmt6	97	58.071	Oreochromis_niloticus
ENSXETG00000004501	trmt6	92	66.815	ENSOANG00000008403	-	99	66.815	Ornithorhynchus_anatinus
ENSXETG00000004501	trmt6	96	66.597	ENSOCUG00000014669	TRMT6	95	66.597	Oryctolagus_cuniculus
ENSXETG00000004501	trmt6	99	56.301	ENSORLG00000009862	trmt6	99	56.301	Oryzias_latipes
ENSXETG00000004501	trmt6	99	55.894	ENSORLG00020001466	trmt6	99	55.894	Oryzias_latipes_hni
ENSXETG00000004501	trmt6	99	54.898	ENSORLG00015015552	trmt6	99	54.898	Oryzias_latipes_hsok
ENSXETG00000004501	trmt6	97	55.202	ENSOMEG00000019874	trmt6	97	56.051	Oryzias_melastigma
ENSXETG00000004501	trmt6	98	65.904	ENSOGAG00000012950	TRMT6	96	65.904	Otolemur_garnettii
ENSXETG00000004501	trmt6	98	66.944	ENSOARG00000017993	TRMT6	96	66.944	Ovis_aries
ENSXETG00000004501	trmt6	98	65.631	ENSPPAG00000036809	TRMT6	96	65.631	Pan_paniscus
ENSXETG00000004501	trmt6	98	66.598	ENSPPRG00000000424	TRMT6	96	66.598	Panthera_pardus
ENSXETG00000004501	trmt6	98	66.598	ENSPTIG00000010629	TRMT6	96	66.598	Panthera_tigris_altaica
ENSXETG00000004501	trmt6	98	66.183	ENSPTRG00000013231	TRMT6	96	66.183	Pan_troglodytes
ENSXETG00000004501	trmt6	98	66.390	ENSPANG00000009284	TRMT6	96	66.390	Papio_anubis
ENSXETG00000004501	trmt6	98	60.248	ENSPKIG00000003441	trmt6	97	60.248	Paramormyrops_kingsleyae
ENSXETG00000004501	trmt6	99	66.258	ENSPSIG00000017048	TRMT6	99	66.258	Pelodiscus_sinensis
ENSXETG00000004501	trmt6	96	57.356	ENSPMGG00000021074	trmt6	96	57.634	Periophthalmus_magnuspinnatus
ENSXETG00000004501	trmt6	96	65.900	ENSPEMG00000023268	Trmt6	95	65.900	Peromyscus_maniculatus_bairdii
ENSXETG00000004501	trmt6	98	66.109	ENSPCIG00000001546	TRMT6	97	64.242	Phascolarctos_cinereus
ENSXETG00000004501	trmt6	98	58.700	ENSPFOG00000003037	trmt6	97	58.700	Poecilia_formosa
ENSXETG00000004501	trmt6	98	58.017	ENSPLAG00000005143	trmt6	97	58.017	Poecilia_latipinna
ENSXETG00000004501	trmt6	98	58.017	ENSPMEG00000014875	trmt6	97	58.017	Poecilia_mexicana
ENSXETG00000004501	trmt6	98	55.814	ENSPREG00000016227	trmt6	97	55.814	Poecilia_reticulata
ENSXETG00000004501	trmt6	98	66.390	ENSPPYG00000010691	TRMT6	96	66.390	Pongo_abelii
ENSXETG00000004501	trmt6	98	66.392	ENSPCAG00000012098	TRMT6	96	66.392	Procavia_capensis
ENSXETG00000004501	trmt6	98	66.944	ENSPCOG00000020723	TRMT6	96	66.944	Propithecus_coquereli
ENSXETG00000004501	trmt6	98	62.781	ENSPVAG00000007539	TRMT6	99	61.220	Pteropus_vampyrus
ENSXETG00000004501	trmt6	98	57.143	ENSPNYG00000000918	trmt6	98	57.384	Pundamilia_nyererei
ENSXETG00000004501	trmt6	99	58.299	ENSPNAG00000019279	trmt6	98	58.299	Pygocentrus_nattereri
ENSXETG00000004501	trmt6	98	65.281	ENSRNOG00000021270	Trmt6	96	65.281	Rattus_norvegicus
ENSXETG00000004501	trmt6	98	66.390	ENSRBIG00000031132	TRMT6	96	66.390	Rhinopithecus_bieti
ENSXETG00000004501	trmt6	98	66.390	ENSRROG00000045329	TRMT6	96	66.390	Rhinopithecus_roxellana
ENSXETG00000004501	trmt6	63	35.000	YNL062C	GCD10	74	35.000	Saccharomyces_cerevisiae
ENSXETG00000004501	trmt6	98	65.975	ENSSBOG00000033602	-	96	65.975	Saimiri_boliviensis_boliviensis
ENSXETG00000004501	trmt6	76	62.865	ENSSBOG00000019803	-	91	62.865	Saimiri_boliviensis_boliviensis
ENSXETG00000004501	trmt6	98	66.667	ENSSHAG00000010754	TRMT6	94	66.667	Sarcophilus_harrisii
ENSXETG00000004501	trmt6	97	62.395	ENSSFOG00015008429	trmt6	97	62.395	Scleropages_formosus
ENSXETG00000004501	trmt6	99	57.055	ENSSMAG00000005352	trmt6	99	58.197	Scophthalmus_maximus
ENSXETG00000004501	trmt6	98	59.197	ENSSDUG00000008294	trmt6	99	59.388	Seriola_dumerili
ENSXETG00000004501	trmt6	98	60.042	ENSSLDG00000002180	trmt6	99	59.213	Seriola_lalandi_dorsalis
ENSXETG00000004501	trmt6	98	61.203	ENSSARG00000005487	TRMT6	99	59.681	Sorex_araneus
ENSXETG00000004501	trmt6	98	59.539	ENSSPAG00000011628	trmt6	98	59.539	Stegastes_partitus
ENSXETG00000004501	trmt6	98	66.327	ENSSSCG00000007046	TRMT6	69	66.327	Sus_scrofa
ENSXETG00000004501	trmt6	98	63.599	ENSTGUG00000002195	TRMT6	99	66.597	Taeniopygia_guttata
ENSXETG00000004501	trmt6	98	55.603	ENSTRUG00000007153	trmt6	97	55.603	Takifugu_rubripes
ENSXETG00000004501	trmt6	99	56.998	ENSTNIG00000010726	TRMT6	99	56.998	Tetraodon_nigroviridis
ENSXETG00000004501	trmt6	74	69.935	ENSTBEG00000016317	TRMT6	75	69.935	Tupaia_belangeri
ENSXETG00000004501	trmt6	98	65.567	ENSTTRG00000012889	TRMT6	96	65.567	Tursiops_truncatus
ENSXETG00000004501	trmt6	98	66.186	ENSUAMG00000008674	TRMT6	96	66.186	Ursus_americanus
ENSXETG00000004501	trmt6	98	66.598	ENSUMAG00000004999	TRMT6	96	66.598	Ursus_maritimus
ENSXETG00000004501	trmt6	98	65.708	ENSVPAG00000002371	TRMT6	99	64.032	Vicugna_pacos
ENSXETG00000004501	trmt6	98	66.528	ENSVVUG00000023370	TRMT6	99	64.800	Vulpes_vulpes
ENSXETG00000004501	trmt6	98	53.797	ENSXCOG00000007761	trmt6	97	53.797	Xiphophorus_couchianus
ENSXETG00000004501	trmt6	98	57.595	ENSXMAG00000008592	trmt6	97	57.595	Xiphophorus_maculatus