EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000004539 (Gene tree)
Gene ID: -
Gene Symbol: trmt1l
Alias: -
Full Name: tRNA methyltransferase 1 like
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 13869 bases
Position: chrGL172655.1:1894161-1908029
Accession: XB-GENE-940324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000059823	TRM	PF02005.16	1.3e-54	1	1
ENSXETP00000009854	TRM	PF02005.16	2.7e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000009854	-	1539	-	ENSXETP00000009854	513 (aa)	-	F7E9D9
ENSXETT00000066392	-	1608	-	ENSXETP00000059823	536 (aa)	-	F7CJB7

Gene Model

Click here to download ENSXETG00000004539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000004539's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000004539	trmt1l	95	60.311	ENSG00000121486	TRMT1L	98	69.231	Homo_sapiens
ENSXETG00000004539	trmt1l	99	56.647	ENSAPOG00000011807	trmt1l	79	56.647	Acanthochromis_polyacanthus
ENSXETG00000004539	trmt1l	95	60.194	ENSAMEG00000013538	TRMT1L	70	60.194	Ailuropoda_melanoleuca
ENSXETG00000004539	trmt1l	71	61.685	ENSACIG00000012049	trmt1l	74	61.685	Amphilophus_citrinellus
ENSXETG00000004539	trmt1l	98	56.202	ENSAOCG00000018112	trmt1l	79	58.753	Amphiprion_ocellaris
ENSXETG00000004539	trmt1l	98	56.395	ENSAPEG00000021433	trmt1l	79	57.948	Amphiprion_percula
ENSXETG00000004539	trmt1l	98	56.977	ENSATEG00000004573	trmt1l	79	58.678	Anabas_testudineus
ENSXETG00000004539	trmt1l	96	61.284	ENSAPLG00000008394	TRMT1L	71	63.492	Anas_platyrhynchos
ENSXETG00000004539	trmt1l	99	60.075	ENSACAG00000002342	TRMT1L	74	60.075	Anolis_carolinensis
ENSXETG00000004539	trmt1l	95	59.922	ENSANAG00000038162	TRMT1L	70	59.653	Aotus_nancymaae
ENSXETG00000004539	trmt1l	98	56.589	ENSACLG00000021625	trmt1l	76	56.589	Astatotilapia_calliptera
ENSXETG00000004539	trmt1l	94	60.446	ENSAMXG00000009602	trmt1l	71	60.446	Astyanax_mexicanus
ENSXETG00000004539	trmt1l	97	59.506	ENSBTAG00000011285	TRMT1L	69	60.311	Bos_taurus
ENSXETG00000004539	trmt1l	93	60.158	ENSCJAG00000005456	TRMT1L	71	59.574	Callithrix_jacchus
ENSXETG00000004539	trmt1l	95	59.922	ENSCAFG00000013518	TRMT1L	69	59.653	Canis_familiaris
ENSXETG00000004539	trmt1l	95	59.922	ENSCAFG00020015640	TRMT1L	70	59.653	Canis_lupus_dingo
ENSXETG00000004539	trmt1l	95	60.700	ENSCHIG00000016522	TRMT1L	70	60.425	Capra_hircus
ENSXETG00000004539	trmt1l	95	60.311	ENSTSYG00000010465	TRMT1L	71	60.039	Carlito_syrichta
ENSXETG00000004539	trmt1l	68	68.067	ENSCAPG00000012562	TRMT1L	63	65.185	Cavia_aperea
ENSXETG00000004539	trmt1l	94	59.646	ENSCPOG00000001567	TRMT1L	74	57.196	Cavia_porcellus
ENSXETG00000004539	trmt1l	95	60.311	ENSCCAG00000018699	TRMT1L	70	60.039	Cebus_capucinus
ENSXETG00000004539	trmt1l	95	60.506	ENSCATG00000043114	TRMT1L	70	60.232	Cercocebus_atys
ENSXETG00000004539	trmt1l	94	61.024	ENSCLAG00000010801	-	71	60.232	Chinchilla_lanigera
ENSXETG00000004539	trmt1l	95	44.356	ENSCLAG00000010853	-	68	43.916	Chinchilla_lanigera
ENSXETG00000004539	trmt1l	95	60.506	ENSCSAG00000012880	TRMT1L	70	60.232	Chlorocebus_sabaeus
ENSXETG00000004539	trmt1l	66	70.782	ENSCHOG00000011164	TRMT1L	56	70.782	Choloepus_hoffmanni
ENSXETG00000004539	trmt1l	99	60.074	ENSCPBG00000015694	TRMT1L	70	63.817	Chrysemys_picta_bellii
ENSXETG00000004539	trmt1l	95	60.506	ENSCANG00000031107	TRMT1L	70	60.232	Colobus_angolensis_palliatus
ENSXETG00000004539	trmt1l	95	57.977	ENSCGRG00001019297	Trmt1l	71	58.621	Cricetulus_griseus_chok1gshd
ENSXETG00000004539	trmt1l	95	57.977	ENSCGRG00000005036	Trmt1l	74	58.621	Cricetulus_griseus_crigri
ENSXETG00000004539	trmt1l	98	57.060	ENSCSEG00000001248	trmt1l	78	58.153	Cynoglossus_semilaevis
ENSXETG00000004539	trmt1l	96	56.800	ENSCVAG00000012274	trmt1l	79	56.800	Cyprinodon_variegatus
ENSXETG00000004539	trmt1l	94	59.756	ENSDARG00000042057	trmt1l	74	60.127	Danio_rerio
ENSXETG00000004539	trmt1l	96	59.266	ENSDNOG00000005239	TRMT1L	70	59.266	Dasypus_novemcinctus
ENSXETG00000004539	trmt1l	94	54.898	ENSDORG00000003298	Trmt1l	61	62.779	Dipodomys_ordii
ENSXETG00000004539	trmt1l	71	70.370	ENSETEG00000015895	TRMT1L	54	70.370	Echinops_telfairi
ENSXETG00000004539	trmt1l	93	49.689	ENSEBUG00000010301	trmt1l	77	49.896	Eptatretus_burgeri
ENSXETG00000004539	trmt1l	95	57.670	ENSEASG00005005551	TRMT1L	74	56.030	Equus_asinus_asinus
ENSXETG00000004539	trmt1l	95	60.311	ENSECAG00000020999	TRMT1L	66	60.039	Equus_caballus
ENSXETG00000004539	trmt1l	84	57.930	ENSEEUG00000014110	TRMT1L	65	57.930	Erinaceus_europaeus
ENSXETG00000004539	trmt1l	99	55.249	ENSELUG00000020587	trmt1l	75	55.433	Esox_lucius
ENSXETG00000004539	trmt1l	95	60.506	ENSFCAG00000011285	TRMT1L	74	58.922	Felis_catus
ENSXETG00000004539	trmt1l	94	61.706	ENSFALG00000003177	TRMT1L	76	63.126	Ficedula_albicollis
ENSXETG00000004539	trmt1l	96	59.923	ENSFDAG00000008822	TRMT1L	72	59.345	Fukomys_damarensis
ENSXETG00000004539	trmt1l	75	60.199	ENSFHEG00000014328	trmt1l	75	60.199	Fundulus_heteroclitus
ENSXETG00000004539	trmt1l	95	58.753	ENSGMOG00000009535	trmt1l	80	58.717	Gadus_morhua
ENSXETG00000004539	trmt1l	96	60.728	ENSGALG00000033077	TRMT1L	70	59.369	Gallus_gallus
ENSXETG00000004539	trmt1l	96	57.283	ENSGAFG00000012445	trmt1l	75	57.283	Gambusia_affinis
ENSXETG00000004539	trmt1l	92	56.917	ENSGACG00000005050	trmt1l	78	56.917	Gasterosteus_aculeatus
ENSXETG00000004539	trmt1l	99	60.444	ENSGAGG00000007441	TRMT1L	70	60.444	Gopherus_agassizii
ENSXETG00000004539	trmt1l	95	60.117	ENSGGOG00000011778	TRMT1L	70	59.846	Gorilla_gorilla
ENSXETG00000004539	trmt1l	98	56.589	ENSHBUG00000000622	trmt1l	79	58.577	Haplochromis_burtoni
ENSXETG00000004539	trmt1l	95	49.801	ENSHGLG00000012595	-	73	49.801	Heterocephalus_glaber_female
ENSXETG00000004539	trmt1l	95	56.400	ENSHGLG00000003135	-	70	56.400	Heterocephalus_glaber_female
ENSXETG00000004539	trmt1l	94	60.630	ENSHGLG00100019412	-	71	59.846	Heterocephalus_glaber_male
ENSXETG00000004539	trmt1l	95	49.801	ENSHGLG00100004569	-	73	49.801	Heterocephalus_glaber_male
ENSXETG00000004539	trmt1l	98	58.824	ENSIPUG00000008873	trmt1l	80	57.386	Ictalurus_punctatus
ENSXETG00000004539	trmt1l	96	59.459	ENSSTOG00000010332	TRMT1L	71	59.459	Ictidomys_tridecemlineatus
ENSXETG00000004539	trmt1l	95	58.835	ENSJJAG00000010929	Trmt1l	73	58.835	Jaculus_jaculus
ENSXETG00000004539	trmt1l	96	58.283	ENSKMAG00000010310	trmt1l	76	58.283	Kryptolebias_marmoratus
ENSXETG00000004539	trmt1l	99	53.916	ENSLBEG00000007982	-	86	53.916	Labrus_bergylta
ENSXETG00000004539	trmt1l	99	53.916	ENSLBEG00000003487	trmt1l	78	53.916	Labrus_bergylta
ENSXETG00000004539	trmt1l	97	58.935	ENSLACG00000008447	TRMT1L	77	58.935	Latimeria_chalumnae
ENSXETG00000004539	trmt1l	95	58.964	ENSLOCG00000001781	trmt1l	71	59.350	Lepisosteus_oculatus
ENSXETG00000004539	trmt1l	96	59.570	ENSLAFG00000004339	TRMT1L	71	60.232	Loxodonta_africana
ENSXETG00000004539	trmt1l	95	60.506	ENSMFAG00000037592	TRMT1L	70	60.232	Macaca_fascicularis
ENSXETG00000004539	trmt1l	96	59.885	ENSMMUG00000013879	TRMT1L	77	58.487	Macaca_mulatta
ENSXETG00000004539	trmt1l	95	60.506	ENSMNEG00000041637	TRMT1L	70	60.232	Macaca_nemestrina
ENSXETG00000004539	trmt1l	94	61.024	ENSMLEG00000004840	TRMT1L	70	60.232	Mandrillus_leucophaeus
ENSXETG00000004539	trmt1l	96	56.349	ENSMAMG00000015305	trmt1l	80	58.943	Mastacembelus_armatus
ENSXETG00000004539	trmt1l	98	56.589	ENSMZEG00005017822	trmt1l	76	56.589	Maylandia_zebra
ENSXETG00000004539	trmt1l	94	61.782	ENSMGAG00000000930	TRMT1L	76	62.823	Meleagris_gallopavo
ENSXETG00000004539	trmt1l	95	56.538	ENSMAUG00000019870	Trmt1l	72	56.250	Mesocricetus_auratus
ENSXETG00000004539	trmt1l	95	60.311	ENSMICG00000009494	TRMT1L	70	60.039	Microcebus_murinus
ENSXETG00000004539	trmt1l	95	58.939	ENSMOCG00000016453	Trmt1l	72	59.004	Microtus_ochrogaster
ENSXETG00000004539	trmt1l	94	57.631	ENSMMOG00000016961	trmt1l	79	57.229	Mola_mola
ENSXETG00000004539	trmt1l	97	61.641	ENSMODG00000007454	TRMT1L	60	61.641	Monodelphis_domestica
ENSXETG00000004539	trmt1l	97	56.250	ENSMALG00000019306	trmt1l	75	56.250	Monopterus_albus
ENSXETG00000004539	trmt1l	95	59.332	MGP_CAROLIEiJ_G0014693	Trmt1l	71	58.857	Mus_caroli
ENSXETG00000004539	trmt1l	95	59.100	ENSMUSG00000053286	Trmt1l	71	58.857	Mus_musculus
ENSXETG00000004539	trmt1l	95	58.414	MGP_PahariEiJ_G0027929	Trmt1l	70	59.038	Mus_pahari
ENSXETG00000004539	trmt1l	80	59.817	MGP_SPRETEiJ_G0015500	Trmt1l	71	58.720	Mus_spretus
ENSXETG00000004539	trmt1l	95	56.699	ENSMPUG00000011859	TRMT1L	74	54.880	Mustela_putorius_furo
ENSXETG00000004539	trmt1l	94	60.558	ENSMLUG00000001136	TRMT1L	72	59.770	Myotis_lucifugus
ENSXETG00000004539	trmt1l	95	58.203	ENSNGAG00000011685	Trmt1l	71	58.835	Nannospalax_galili
ENSXETG00000004539	trmt1l	93	56.067	ENSNBRG00000004053	trmt1l	92	63.566	Neolamprologus_brichardi
ENSXETG00000004539	trmt1l	95	60.700	ENSNLEG00000018030	TRMT1L	70	60.425	Nomascus_leucogenys
ENSXETG00000004539	trmt1l	80	52.968	ENSMEUG00000011344	TRMT1L	63	54.118	Notamacropus_eugenii
ENSXETG00000004539	trmt1l	94	53.229	ENSOPRG00000000680	TRMT1L	78	53.229	Ochotona_princeps
ENSXETG00000004539	trmt1l	96	57.611	ENSODEG00000000826	TRMT1L	71	57.500	Octodon_degus
ENSXETG00000004539	trmt1l	98	56.977	ENSONIG00000007823	trmt1l	82	57.031	Oreochromis_niloticus
ENSXETG00000004539	trmt1l	93	61.972	ENSOANG00000001010	TRMT1L	76	62.325	Ornithorhynchus_anatinus
ENSXETG00000004539	trmt1l	96	56.840	ENSOCUG00000004896	TRMT1L	73	57.225	Oryctolagus_cuniculus
ENSXETG00000004539	trmt1l	93	58.452	ENSORLG00000029610	trmt1l	77	59.197	Oryzias_latipes
ENSXETG00000004539	trmt1l	93	59.146	ENSORLG00020002203	trmt1l	73	59.146	Oryzias_latipes_hni
ENSXETG00000004539	trmt1l	93	58.943	ENSORLG00015021512	trmt1l	73	58.943	Oryzias_latipes_hsok
ENSXETG00000004539	trmt1l	85	57.320	ENSOMEG00000016275	trmt1l	67	57.320	Oryzias_melastigma
ENSXETG00000004539	trmt1l	91	59.322	ENSOGAG00000016186	TRMT1L	75	59.322	Otolemur_garnettii
ENSXETG00000004539	trmt1l	95	60.700	ENSOARG00000003786	TRMT1L	70	60.425	Ovis_aries
ENSXETG00000004539	trmt1l	95	60.311	ENSPPAG00000029141	TRMT1L	70	60.039	Pan_paniscus
ENSXETG00000004539	trmt1l	94	61.024	ENSPPRG00000023981	TRMT1L	71	60.232	Panthera_pardus
ENSXETG00000004539	trmt1l	95	60.506	ENSPTIG00000021754	TRMT1L	74	58.922	Panthera_tigris_altaica
ENSXETG00000004539	trmt1l	95	60.311	ENSPTRG00000001776	TRMT1L	70	60.039	Pan_troglodytes
ENSXETG00000004539	trmt1l	95	59.728	ENSPANG00000020890	TRMT1L	70	59.459	Papio_anubis
ENSXETG00000004539	trmt1l	96	58.893	ENSPKIG00000005941	trmt1l	73	58.777	Paramormyrops_kingsleyae
ENSXETG00000004539	trmt1l	94	62.376	ENSPSIG00000010011	TRMT1L	73	63.473	Pelodiscus_sinensis
ENSXETG00000004539	trmt1l	92	54.865	ENSPMGG00000021359	trmt1l	87	55.072	Periophthalmus_magnuspinnatus
ENSXETG00000004539	trmt1l	95	58.414	ENSPEMG00000000031	Trmt1l	71	59.188	Peromyscus_maniculatus_bairdii
ENSXETG00000004539	trmt1l	95	55.985	ENSPMAG00000005838	trmt1l	83	55.212	Petromyzon_marinus
ENSXETG00000004539	trmt1l	97	61.568	ENSPCIG00000002409	TRMT1L	71	61.568	Phascolarctos_cinereus
ENSXETG00000004539	trmt1l	96	57.002	ENSPFOG00000003872	trmt1l	79	57.708	Poecilia_formosa
ENSXETG00000004539	trmt1l	96	57.002	ENSPLAG00000010387	trmt1l	78	53.552	Poecilia_latipinna
ENSXETG00000004539	trmt1l	96	57.002	ENSPMEG00000011828	trmt1l	79	58.058	Poecilia_mexicana
ENSXETG00000004539	trmt1l	95	57.884	ENSPREG00000002866	trmt1l	76	56.867	Poecilia_reticulata
ENSXETG00000004539	trmt1l	95	60.311	ENSPPYG00000000416	TRMT1L	70	60.039	Pongo_abelii
ENSXETG00000004539	trmt1l	85	60.173	ENSPCAG00000008257	TRMT1L	64	59.197	Procavia_capensis
ENSXETG00000004539	trmt1l	76	60.000	ENSPCOG00000005682	TRMT1L	63	60.000	Propithecus_coquereli
ENSXETG00000004539	trmt1l	79	67.610	ENSPVAG00000005961	TRMT1L	58	67.610	Pteropus_vampyrus
ENSXETG00000004539	trmt1l	96	56.660	ENSPNYG00000005607	trmt1l	79	58.577	Pundamilia_nyererei
ENSXETG00000004539	trmt1l	93	59.918	ENSPNAG00000004389	trmt1l	70	59.918	Pygocentrus_nattereri
ENSXETG00000004539	trmt1l	95	58.532	ENSRNOG00000002580	Trmt1l	71	58.157	Rattus_norvegicus
ENSXETG00000004539	trmt1l	95	60.506	ENSRBIG00000042589	TRMT1L	70	60.232	Rhinopithecus_bieti
ENSXETG00000004539	trmt1l	95	60.506	ENSRROG00000032183	TRMT1L	70	60.232	Rhinopithecus_roxellana
ENSXETG00000004539	trmt1l	95	59.922	ENSSBOG00000029282	TRMT1L	70	59.653	Saimiri_boliviensis_boliviensis
ENSXETG00000004539	trmt1l	99	55.576	ENSSFOG00015004878	trmt1l	76	55.576	Scleropages_formosus
ENSXETG00000004539	trmt1l	63	56.037	ENSSMAG00000015425	trmt1l	73	56.098	Scophthalmus_maximus
ENSXETG00000004539	trmt1l	98	57.225	ENSSDUG00000021807	trmt1l	78	59.874	Seriola_dumerili
ENSXETG00000004539	trmt1l	95	57.724	ENSSLDG00000016579	trmt1l	79	58.678	Seriola_lalandi_dorsalis
ENSXETG00000004539	trmt1l	65	67.698	ENSSARG00000010135	TRMT1L	61	67.698	Sorex_araneus
ENSXETG00000004539	trmt1l	91	64.076	ENSSPUG00000003927	TRMT1L	78	64.076	Sphenodon_punctatus
ENSXETG00000004539	trmt1l	98	56.977	ENSSPAG00000008597	trmt1l	76	56.977	Stegastes_partitus
ENSXETG00000004539	trmt1l	99	58.614	ENSSSCG00000021393	TRMT1L	70	58.614	Sus_scrofa
ENSXETG00000004539	trmt1l	94	60.594	ENSTGUG00000003737	TRMT1L	74	61.952	Taeniopygia_guttata
ENSXETG00000004539	trmt1l	92	56.356	ENSTRUG00000002396	trmt1l	85	56.356	Takifugu_rubripes
ENSXETG00000004539	trmt1l	58	68.439	ENSTNIG00000005534	trmt1l	71	68.439	Tetraodon_nigroviridis
ENSXETG00000004539	trmt1l	75	57.300	ENSTBEG00000016498	TRMT1L	57	57.609	Tupaia_belangeri
ENSXETG00000004539	trmt1l	95	58.252	ENSTTRG00000005892	TRMT1L	70	58.108	Tursiops_truncatus
ENSXETG00000004539	trmt1l	95	60.311	ENSUAMG00000020936	TRMT1L	70	60.194	Ursus_americanus
ENSXETG00000004539	trmt1l	95	60.311	ENSUMAG00000021919	TRMT1L	69	60.194	Ursus_maritimus
ENSXETG00000004539	trmt1l	92	61.523	ENSVPAG00000011854	TRMT1L	76	61.523	Vicugna_pacos
ENSXETG00000004539	trmt1l	95	59.922	ENSVVUG00000009166	TRMT1L	70	59.653	Vulpes_vulpes
ENSXETG00000004539	trmt1l	93	58.471	ENSXCOG00000007372	trmt1l	78	58.471	Xiphophorus_couchianus
ENSXETG00000004539	trmt1l	96	57.087	ENSXMAG00000003575	trmt1l	80	58.542	Xiphophorus_maculatus