EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000004556 (Gene tree)
Gene ID: -
Gene Symbol: rab18
Alias: -
Full Name: Xenopus tropicalis RAB18%2C member RAS oncogene family (rab18)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 16214 bases
Position: chrGL172683.1:759652-775865
Accession: NM_001017281
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000009896	MMR_HSR1	PF01926.23	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000009896	-	2437	-	ENSXETP00000009896	206 (aa)	-	Q28D30

Gene Model

Click here to download ENSXETG00000004556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000004556's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000004556	rab18	82	45.294	ENSXETG00000020404	rab25	78	45.294
ENSXETG00000004556	rab18	78	47.531	ENSXETG00000006639	rab11a	75	47.531
ENSXETG00000004556	rab18	88	40.217	ENSXETG00000016920	rab33b	80	40.217
ENSXETG00000004556	rab18	89	44.022	ENSXETG00000002201	rab15	84	44.022
ENSXETG00000004556	rab18	83	41.040	ENSXETG00000032443	RAB39B	81	41.040
ENSXETG00000004556	rab18	79	40.606	ENSXETG00000020622	rab39a	80	40.606
ENSXETG00000004556	rab18	93	35.052	ENSXETG00000005505	MRAS	81	37.059
ENSXETG00000004556	rab18	80	33.537	ENSXETG00000003398	kras	88	33.537
ENSXETG00000004556	rab18	82	47.929	ENSXETG00000013633	rab30	83	47.929
ENSXETG00000004556	rab18	86	38.547	ENSXETG00000023200	rab6a	93	38.547
ENSXETG00000004556	rab18	63	43.846	ENSXETG00000020729	rab13	81	43.846
ENSXETG00000004556	rab18	84	31.818	ENSXETG00000019257	rab34	68	31.818
ENSXETG00000004556	rab18	80	34.146	ENSXETG00000014935	ralb	87	34.146
ENSXETG00000004556	rab18	83	40.351	ENSXETG00000030938	rab41	79	40.351
ENSXETG00000004556	rab18	95	36.000	ENSXETG00000016176	rab7a	81	38.922
ENSXETG00000004556	rab18	93	45.755	ENSXETG00000017184	rab2b	86	48.128
ENSXETG00000004556	rab18	79	37.805	ENSXETG00000005944	rab7b	82	37.805
ENSXETG00000004556	rab18	78	46.914	ENSXETG00000008055	rab3b	82	46.914
ENSXETG00000004556	rab18	72	47.333	ENSXETG00000018183	rab33a	70	47.333
ENSXETG00000004556	rab18	78	33.129	ENSXETG00000022517	rerg	81	33.129
ENSXETG00000004556	rab18	95	41.919	ENSXETG00000002305	rab5a	86	43.548
ENSXETG00000004556	rab18	87	34.807	ENSXETG00000021449	nras	94	34.807
ENSXETG00000004556	rab18	79	49.091	ENSXETG00000004289	rab12	59	47.312
ENSXETG00000004556	rab18	79	45.732	ENSXETG00000011370	rab35	81	45.732
ENSXETG00000004556	rab18	56	30.000	ENSXETG00000008725	arl14	56	30.000
ENSXETG00000004556	rab18	78	51.235	ENSXETG00000014011	rab1a	80	51.235
ENSXETG00000004556	rab18	81	33.133	ENSXETG00000006040	hras	87	33.133
ENSXETG00000004556	rab18	78	46.914	ENSXETG00000021890	rab11b.2	73	46.914
ENSXETG00000004556	rab18	72	34.000	ENSXETG00000007760	rap2b	88	34.783
ENSXETG00000004556	rab18	98	32.843	ENSXETG00000004449	rab23	71	32.948
ENSXETG00000004556	rab18	79	40.361	ENSXETG00000013345	rab9a	83	40.361
ENSXETG00000004556	rab18	79	37.349	ENSXETG00000018133	rab9b	83	37.349
ENSXETG00000004556	rab18	70	40.690	ENSXETG00000031363	-	69	40.690
ENSXETG00000004556	rab18	72	39.597	ENSXETG00000015712	rabl2b	64	39.597
ENSXETG00000004556	rab18	84	35.870	ENSXETG00000014257	mgc75872	82	36.145
ENSXETG00000004556	rab18	77	47.500	ENSXETG00000025484	rab11b.1	72	47.500
ENSXETG00000004556	rab18	84	48.276	ENSXETG00000026943	rab35	95	45.596

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000004556	rab18	100	88.835	ENSAPOG00000010760	rab18a	100	88.350	Acanthochromis_polyacanthus
ENSXETG00000004556	rab18	100	76.214	ENSACIG00000009617	rab18a	100	75.728	Amphilophus_citrinellus
ENSXETG00000004556	rab18	100	88.350	ENSAOCG00000016233	rab18a	100	87.864	Amphiprion_ocellaris
ENSXETG00000004556	rab18	100	88.350	ENSAPEG00000005392	rab18a	100	87.864	Amphiprion_percula
ENSXETG00000004556	rab18	100	89.320	ENSATEG00000021911	rab18a	100	88.835	Anabas_testudineus
ENSXETG00000004556	rab18	100	92.718	ENSACAG00000005463	-	100	92.718	Anolis_carolinensis
ENSXETG00000004556	rab18	100	86.893	ENSACLG00000011484	rab18a	100	86.408	Astatotilapia_calliptera
ENSXETG00000004556	rab18	96	71.212	ENSCPBG00000027619	-	89	76.111	Chrysemys_picta_bellii
ENSXETG00000004556	rab18	100	91.748	ENSCPBG00000015839	-	100	91.748	Chrysemys_picta_bellii
ENSXETG00000004556	rab18	97	78.000	ENSCING00000006838	-	95	80.952	Ciona_intestinalis
ENSXETG00000004556	rab18	97	75.000	ENSCSAVG00000010348	-	95	78.307	Ciona_savignyi
ENSXETG00000004556	rab18	100	89.806	ENSCSEG00000011816	rab18a	100	89.320	Cynoglossus_semilaevis
ENSXETG00000004556	rab18	93	89.062	ENSCVAG00000015451	rab18a	100	87.379	Cyprinodon_variegatus
ENSXETG00000004556	rab18	100	82.039	ENSDARG00000055291	rab18a	100	82.039	Danio_rerio
ENSXETG00000004556	rab18	100	91.262	ENSELUG00000003805	rab18a	100	91.262	Esox_lucius
ENSXETG00000004556	rab18	93	89.583	ENSFHEG00000019455	rab18a	100	87.864	Fundulus_heteroclitus
ENSXETG00000004556	rab18	93	89.005	ENSGAFG00000002790	rab18a	100	86.408	Gambusia_affinis
ENSXETG00000004556	rab18	100	91.262	ENSGAGG00000015642	-	100	91.262	Gopherus_agassizii
ENSXETG00000004556	rab18	100	86.893	ENSHBUG00000001518	rab18a	100	86.408	Haplochromis_burtoni
ENSXETG00000004556	rab18	99	88.293	ENSLBEG00000005861	rab18a	95	87.805	Labrus_bergylta
ENSXETG00000004556	rab18	92	96.316	ENSLACG00000009310	rab18a	100	93.689	Latimeria_chalumnae
ENSXETG00000004556	rab18	93	93.717	ENSLOCG00000007491	rab18a	93	93.717	Lepisosteus_oculatus
ENSXETG00000004556	rab18	100	89.320	ENSMAMG00000014320	rab18a	100	88.835	Mastacembelus_armatus
ENSXETG00000004556	rab18	100	86.893	ENSMZEG00005017235	rab18a	100	86.408	Maylandia_zebra
ENSXETG00000004556	rab18	100	89.806	ENSMALG00000009813	rab18a	100	89.320	Monopterus_albus
ENSXETG00000004556	rab18	100	86.893	ENSNBRG00000013507	rab18a	100	86.408	Neolamprologus_brichardi
ENSXETG00000004556	rab18	93	88.021	ENSORLG00000004624	rab18a	100	85.922	Oryzias_latipes
ENSXETG00000004556	rab18	93	88.542	ENSORLG00020008333	rab18a	100	86.408	Oryzias_latipes_hni
ENSXETG00000004556	rab18	93	88.021	ENSORLG00015004739	rab18a	100	85.922	Oryzias_latipes_hsok
ENSXETG00000004556	rab18	93	88.482	ENSOMEG00000020605	rab18a	100	85.437	Oryzias_melastigma
ENSXETG00000004556	rab18	100	88.835	ENSPKIG00000009825	rab18a	100	88.835	Paramormyrops_kingsleyae
ENSXETG00000004556	rab18	100	86.408	ENSPMGG00000020409	-	100	86.408	Periophthalmus_magnuspinnatus
ENSXETG00000004556	rab18	93	89.529	ENSPFOG00000007571	rab18a	100	86.893	Poecilia_formosa
ENSXETG00000004556	rab18	93	89.529	ENSPLAG00000010104	rab18a	100	86.893	Poecilia_latipinna
ENSXETG00000004556	rab18	93	89.529	ENSPMEG00000013085	rab18a	100	86.893	Poecilia_mexicana
ENSXETG00000004556	rab18	93	89.529	ENSPREG00000005923	rab18a	83	86.893	Poecilia_reticulata
ENSXETG00000004556	rab18	100	86.893	ENSPNYG00000007064	rab18a	100	86.408	Pundamilia_nyererei
ENSXETG00000004556	rab18	99	82.759	ENSPNAG00000011548	rab18a	95	86.316	Pygocentrus_nattereri
ENSXETG00000004556	rab18	92	94.180	ENSSFOG00015017444	rab18a	84	90.777	Scleropages_formosus
ENSXETG00000004556	rab18	93	89.637	ENSSMAG00000002969	rab18a	100	87.440	Scophthalmus_maximus
ENSXETG00000004556	rab18	93	91.667	ENSSDUG00000003823	rab18a	100	89.320	Seriola_dumerili
ENSXETG00000004556	rab18	93	91.667	ENSSLDG00000006977	rab18a	100	89.320	Seriola_lalandi_dorsalis
ENSXETG00000004556	rab18	92	94.737	ENSSPUG00000017677	-	100	91.748	Sphenodon_punctatus
ENSXETG00000004556	rab18	100	87.379	ENSTRUG00000004984	rab18a	100	86.893	Takifugu_rubripes
ENSXETG00000004556	rab18	100	89.806	ENSUMAG00000015574	-	100	89.806	Ursus_maritimus
ENSXETG00000004556	rab18	93	89.529	ENSXMAG00000024122	rab18a	100	86.893	Xiphophorus_maculatus