EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000004597 (Gene tree)
Gene ID: -
Gene Symbol: tsen34
Alias: -
Full Name: tRNA splicing endonuclease subunit 34
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 5265 bases
Position: chrGL172759.1:669874-675138
Accession: XB-GENE-5932624
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000010004	tRNA_int_endo	PF01974.17	8.3e-21	1	1
ENSXETP00000059475	tRNA_int_endo	PF01974.17	8.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000010004	-	1111	-	ENSXETP00000010004	296 (aa)	-	F6Z3Z2
ENSXETT00000060726	-	1183	-	ENSXETP00000059475	308 (aa)	-	F6QY14

Gene Model

Click here to download ENSXETG00000004597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000004597's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000004597	tsen34	100	44.551	ENSG00000170892	TSEN34	100	44.551	Homo_sapiens
ENSXETG00000004597	tsen34	94	38.434	ENSAPOG00000012557	-	87	38.434	Acanthochromis_polyacanthus
ENSXETG00000004597	tsen34	99	34.202	ENSAPOG00000008579	-	94	38.078	Acanthochromis_polyacanthus
ENSXETG00000004597	tsen34	99	38.926	ENSAPOG00000001248	tsen34	94	38.926	Acanthochromis_polyacanthus
ENSXETG00000004597	tsen34	92	43.299	ENSAMEG00000004585	TSEN34	100	43.299	Ailuropoda_melanoleuca
ENSXETG00000004597	tsen34	99	39.806	ENSACIG00000007110	tsen34	87	40.940	Amphilophus_citrinellus
ENSXETG00000004597	tsen34	99	41.137	ENSAOCG00000006905	tsen34	94	41.137	Amphiprion_ocellaris
ENSXETG00000004597	tsen34	99	40.268	ENSAPEG00000019171	tsen34	94	40.268	Amphiprion_percula
ENSXETG00000004597	tsen34	99	39.130	ENSATEG00000019800	tsen34	97	39.130	Anabas_testudineus
ENSXETG00000004597	tsen34	100	51.282	ENSACAG00000016189	TSEN34	100	53.035	Anolis_carolinensis
ENSXETG00000004597	tsen34	100	44.231	ENSANAG00000026113	TSEN34	100	44.231	Aotus_nancymaae
ENSXETG00000004597	tsen34	99	39.249	ENSACLG00000009661	tsen34	91	40.956	Astatotilapia_calliptera
ENSXETG00000004597	tsen34	99	40.404	ENSAMXG00000017568	tsen34	87	40.404	Astyanax_mexicanus
ENSXETG00000004597	tsen34	100	42.492	ENSBTAG00000006486	TSEN34	100	42.173	Bos_taurus
ENSXETG00000004597	tsen34	100	44.156	ENSCJAG00000001128	TSEN34	100	43.667	Callithrix_jacchus
ENSXETG00000004597	tsen34	100	42.500	ENSCAFG00000002675	TSEN34	100	42.587	Canis_familiaris
ENSXETG00000004597	tsen34	100	43.711	ENSCAFG00020018350	TSEN34	100	42.857	Canis_lupus_dingo
ENSXETG00000004597	tsen34	100	43.450	ENSCHIG00000020705	TSEN34	100	43.450	Capra_hircus
ENSXETG00000004597	tsen34	98	42.208	ENSTSYG00000028200	TSEN34	98	41.967	Carlito_syrichta
ENSXETG00000004597	tsen34	64	42.929	ENSCAPG00000012811	-	98	43.367	Cavia_aperea
ENSXETG00000004597	tsen34	99	43.269	ENSCPOG00000012672	TSEN34	99	44.224	Cavia_porcellus
ENSXETG00000004597	tsen34	100	44.156	ENSCCAG00000036023	TSEN34	100	43.506	Cebus_capucinus
ENSXETG00000004597	tsen34	96	43.478	ENSCATG00000033390	TSEN34	94	43.478	Cercocebus_atys
ENSXETG00000004597	tsen34	100	43.087	ENSCLAG00000000618	TSEN34	100	42.671	Chinchilla_lanigera
ENSXETG00000004597	tsen34	100	44.231	ENSCSAG00000001891	TSEN34	100	44.231	Chlorocebus_sabaeus
ENSXETG00000004597	tsen34	100	44.231	ENSCANG00000040984	TSEN34	100	44.231	Colobus_angolensis_palliatus
ENSXETG00000004597	tsen34	100	42.271	ENSCGRG00001006296	Tsen34	100	42.271	Cricetulus_griseus_chok1gshd
ENSXETG00000004597	tsen34	68	38.667	ENSCGRG00000008494	Tsen34	98	38.627	Cricetulus_griseus_crigri
ENSXETG00000004597	tsen34	99	40.850	ENSCSEG00000006278	tsen34	89	40.476	Cynoglossus_semilaevis
ENSXETG00000004597	tsen34	99	40.604	ENSDARG00000061370	tsen34	89	40.604	Danio_rerio
ENSXETG00000004597	tsen34	100	41.509	ENSDNOG00000039332	TSEN34	100	41.509	Dasypus_novemcinctus
ENSXETG00000004597	tsen34	100	44.409	ENSDORG00000029071	Tsen34	100	44.409	Dipodomys_ordii
ENSXETG00000004597	tsen34	100	42.540	ENSEASG00005021580	TSEN34	100	42.540	Equus_asinus_asinus
ENSXETG00000004597	tsen34	100	43.082	ENSECAG00000019651	TSEN34	86	42.271	Equus_caballus
ENSXETG00000004597	tsen34	58	36.702	ENSEEUG00000005692	TSEN34	65	36.702	Erinaceus_europaeus
ENSXETG00000004597	tsen34	99	39.934	ENSELUG00000006262	tsen34	92	40.000	Esox_lucius
ENSXETG00000004597	tsen34	100	44.654	ENSFCAG00000014045	TSEN34	100	44.654	Felis_catus
ENSXETG00000004597	tsen34	82	40.711	ENSFDAG00000017995	TSEN34	98	41.270	Fukomys_damarensis
ENSXETG00000004597	tsen34	99	37.710	ENSFHEG00000008791	tsen34	92	41.751	Fundulus_heteroclitus
ENSXETG00000004597	tsen34	74	38.288	ENSGMOG00000001961	tsen34	97	38.288	Gadus_morhua
ENSXETG00000004597	tsen34	99	38.333	ENSGAFG00000016880	tsen34	94	37.919	Gambusia_affinis
ENSXETG00000004597	tsen34	99	37.987	ENSGACG00000004800	tsen34	99	37.987	Gasterosteus_aculeatus
ENSXETG00000004597	tsen34	100	53.020	ENSGAGG00000008982	TSEN34	73	53.020	Gopherus_agassizii
ENSXETG00000004597	tsen34	100	45.016	ENSGGOG00000008197	TSEN34	100	45.016	Gorilla_gorilla
ENSXETG00000004597	tsen34	99	40.339	ENSHBUG00000016593	tsen34	82	40.816	Haplochromis_burtoni
ENSXETG00000004597	tsen34	100	43.730	ENSHGLG00000017619	TSEN34	100	43.730	Heterocephalus_glaber_female
ENSXETG00000004597	tsen34	82	39.464	ENSHGLG00100008719	TSEN34	96	39.464	Heterocephalus_glaber_male
ENSXETG00000004597	tsen34	99	39.933	ENSHCOG00000001368	tsen34	95	39.365	Hippocampus_comes
ENSXETG00000004597	tsen34	99	41.060	ENSIPUG00000008359	tsen34	87	41.060	Ictalurus_punctatus
ENSXETG00000004597	tsen34	100	43.631	ENSSTOG00000023816	TSEN34	100	43.631	Ictidomys_tridecemlineatus
ENSXETG00000004597	tsen34	100	43.168	ENSJJAG00000016301	Tsen34	100	43.168	Jaculus_jaculus
ENSXETG00000004597	tsen34	99	42.140	ENSKMAG00000007181	tsen34	86	41.414	Kryptolebias_marmoratus
ENSXETG00000004597	tsen34	99	42.617	ENSLBEG00000015001	tsen34	95	42.617	Labrus_bergylta
ENSXETG00000004597	tsen34	74	50.420	ENSLACG00000013346	-	99	49.378	Latimeria_chalumnae
ENSXETG00000004597	tsen34	99	42.321	ENSLOCG00000001887	tsen34	97	42.321	Lepisosteus_oculatus
ENSXETG00000004597	tsen34	100	41.509	ENSLAFG00000015215	TSEN34	100	42.105	Loxodonta_africana
ENSXETG00000004597	tsen34	100	44.551	ENSMFAG00000044825	TSEN34	100	44.551	Macaca_fascicularis
ENSXETG00000004597	tsen34	100	44.551	ENSMMUG00000016571	TSEN34	100	44.551	Macaca_mulatta
ENSXETG00000004597	tsen34	100	44.551	ENSMNEG00000045457	TSEN34	100	44.551	Macaca_nemestrina
ENSXETG00000004597	tsen34	96	33.110	ENSMLEG00000034295	TSEN34	93	33.110	Mandrillus_leucophaeus
ENSXETG00000004597	tsen34	99	39.597	ENSMAMG00000018407	tsen34	96	39.465	Mastacembelus_armatus
ENSXETG00000004597	tsen34	99	40.339	ENSMZEG00005002313	tsen34	92	40.816	Maylandia_zebra
ENSXETG00000004597	tsen34	81	38.824	ENSMAUG00000019716	Tsen34	81	37.692	Mesocricetus_auratus
ENSXETG00000004597	tsen34	100	43.910	ENSMICG00000002409	TSEN34	100	43.910	Microcebus_murinus
ENSXETG00000004597	tsen34	100	40.752	ENSMOCG00000022190	Tsen34	100	40.752	Microtus_ochrogaster
ENSXETG00000004597	tsen34	99	37.736	ENSMMOG00000009551	tsen34	93	40.364	Mola_mola
ENSXETG00000004597	tsen34	99	48.208	ENSMODG00000003984	-	76	48.534	Monodelphis_domestica
ENSXETG00000004597	tsen34	99	39.333	ENSMALG00000018918	tsen34	95	39.333	Monopterus_albus
ENSXETG00000004597	tsen34	100	43.082	MGP_CAROLIEiJ_G0029099	Tsen34	100	42.222	Mus_caroli
ENSXETG00000004597	tsen34	100	42.633	ENSMUSG00000035585	Tsen34	100	42.320	Mus_musculus
ENSXETG00000004597	tsen34	100	43.302	MGP_PahariEiJ_G0020968	Tsen34	100	42.500	Mus_pahari
ENSXETG00000004597	tsen34	100	42.633	MGP_SPRETEiJ_G0030152	Tsen34	100	42.320	Mus_spretus
ENSXETG00000004597	tsen34	100	44.340	ENSMPUG00000010373	TSEN34	100	44.025	Mustela_putorius_furo
ENSXETG00000004597	tsen34	100	43.218	ENSMLUG00000016894	TSEN34	100	43.450	Myotis_lucifugus
ENSXETG00000004597	tsen34	81	39.382	ENSNGAG00000016187	Tsen34	93	38.996	Nannospalax_galili
ENSXETG00000004597	tsen34	99	38.835	ENSNBRG00000008640	tsen34	98	40.067	Neolamprologus_brichardi
ENSXETG00000004597	tsen34	100	44.551	ENSNLEG00000006309	TSEN34	100	44.551	Nomascus_leucogenys
ENSXETG00000004597	tsen34	99	48.980	ENSMEUG00000002978	TSEN34	99	48.980	Notamacropus_eugenii
ENSXETG00000004597	tsen34	100	41.456	ENSODEG00000000096	TSEN34	100	41.456	Octodon_degus
ENSXETG00000004597	tsen34	99	40.203	ENSONIG00000017253	tsen34	98	40.878	Oreochromis_niloticus
ENSXETG00000004597	tsen34	74	44.397	ENSOANG00000014747	-	99	44.397	Ornithorhynchus_anatinus
ENSXETG00000004597	tsen34	99	38.079	ENSORLG00015012740	tsen34	94	38.079	Oryzias_latipes_hsok
ENSXETG00000004597	tsen34	99	38.851	ENSOMEG00000016771	tsen34	93	38.851	Oryzias_melastigma
ENSXETG00000004597	tsen34	100	43.269	ENSOGAG00000006966	TSEN34	100	43.269	Otolemur_garnettii
ENSXETG00000004597	tsen34	82	39.313	ENSOARG00000002763	TSEN34	95	40.351	Ovis_aries
ENSXETG00000004597	tsen34	100	44.551	ENSPPAG00000036935	TSEN34	100	44.551	Pan_paniscus
ENSXETG00000004597	tsen34	100	44.654	ENSPPRG00000011779	TSEN34	100	44.654	Panthera_pardus
ENSXETG00000004597	tsen34	100	44.551	ENSPTRG00000011448	TSEN34	100	44.551	Pan_troglodytes
ENSXETG00000004597	tsen34	100	44.551	ENSPTRG00000044768	-	100	44.551	Pan_troglodytes
ENSXETG00000004597	tsen34	100	44.551	ENSPANG00000012101	TSEN34	100	44.551	Papio_anubis
ENSXETG00000004597	tsen34	99	43.289	ENSPKIG00000014674	tsen34	93	43.289	Paramormyrops_kingsleyae
ENSXETG00000004597	tsen34	100	42.320	ENSPEMG00000014535	Tsen34	100	42.767	Peromyscus_maniculatus_bairdii
ENSXETG00000004597	tsen34	99	39.262	ENSPFOG00000008679	tsen34	94	39.933	Poecilia_formosa
ENSXETG00000004597	tsen34	99	40.864	ENSPLAG00000017309	tsen34	94	40.940	Poecilia_latipinna
ENSXETG00000004597	tsen34	99	39.262	ENSPMEG00000005235	tsen34	94	39.933	Poecilia_mexicana
ENSXETG00000004597	tsen34	99	40.604	ENSPREG00000021784	tsen34	94	40.604	Poecilia_reticulata
ENSXETG00000004597	tsen34	100	44.231	ENSPPYG00000010376	TSEN34	96	44.231	Pongo_abelii
ENSXETG00000004597	tsen34	99	42.765	ENSPCAG00000012359	TSEN34	100	42.722	Procavia_capensis
ENSXETG00000004597	tsen34	100	43.312	ENSPCOG00000013843	TSEN34	100	43.910	Propithecus_coquereli
ENSXETG00000004597	tsen34	100	42.581	ENSPVAG00000015570	TSEN34	100	42.208	Pteropus_vampyrus
ENSXETG00000004597	tsen34	99	40.000	ENSPNYG00000024090	tsen34	72	40.476	Pundamilia_nyererei
ENSXETG00000004597	tsen34	99	40.667	ENSPNAG00000028698	tsen34	86	40.667	Pygocentrus_nattereri
ENSXETG00000004597	tsen34	100	41.456	ENSRNOG00000059572	Tsen34l1	100	42.320	Rattus_norvegicus
ENSXETG00000004597	tsen34	100	41.456	ENSRNOG00000055179	Tsen34	100	42.320	Rattus_norvegicus
ENSXETG00000004597	tsen34	100	44.551	ENSRBIG00000034430	TSEN34	100	44.551	Rhinopithecus_bieti
ENSXETG00000004597	tsen34	100	44.231	ENSRROG00000024217	TSEN34	100	44.231	Rhinopithecus_roxellana
ENSXETG00000004597	tsen34	96	43.813	ENSSBOG00000016017	TSEN34	96	44.218	Saimiri_boliviensis_boliviensis
ENSXETG00000004597	tsen34	69	43.662	ENSSHAG00000009295	-	99	45.933	Sarcophilus_harrisii
ENSXETG00000004597	tsen34	71	40.758	ENSSFOG00015017579	tsen34	82	40.758	Scleropages_formosus
ENSXETG00000004597	tsen34	99	39.677	ENSSMAG00000005214	tsen34	96	39.057	Scophthalmus_maximus
ENSXETG00000004597	tsen34	99	40.268	ENSSDUG00000005391	tsen34	92	40.268	Seriola_dumerili
ENSXETG00000004597	tsen34	99	40.604	ENSSLDG00000006144	tsen34	88	40.604	Seriola_lalandi_dorsalis
ENSXETG00000004597	tsen34	96	37.421	ENSSARG00000005857	TSEN34	83	37.061	Sorex_araneus
ENSXETG00000004597	tsen34	100	50.333	ENSSPUG00000008447	TSEN34	100	50.333	Sphenodon_punctatus
ENSXETG00000004597	tsen34	99	37.742	ENSSPAG00000010512	tsen34	93	39.597	Stegastes_partitus
ENSXETG00000004597	tsen34	100	43.810	ENSSSCG00000003268	TSEN34	100	42.633	Sus_scrofa
ENSXETG00000004597	tsen34	99	34.694	ENSTRUG00000000787	tsen34	88	34.694	Takifugu_rubripes
ENSXETG00000004597	tsen34	99	41.554	ENSTNIG00000001937	-	99	41.892	Tetraodon_nigroviridis
ENSXETG00000004597	tsen34	99	41.333	ENSTNIG00000011201	tsen34	99	41.667	Tetraodon_nigroviridis
ENSXETG00000004597	tsen34	100	43.082	ENSTTRG00000006571	TSEN34	100	43.082	Tursiops_truncatus
ENSXETG00000004597	tsen34	100	43.711	ENSUAMG00000008701	TSEN34	100	42.902	Ursus_americanus
ENSXETG00000004597	tsen34	100	43.711	ENSVVUG00000008211	TSEN34	100	42.857	Vulpes_vulpes
ENSXETG00000004597	tsen34	99	41.667	ENSXMAG00000024266	tsen34	94	41.333	Xiphophorus_maculatus