EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000004668 (Gene tree)
Gene ID: -
Gene Symbol: exosc4
Alias: -
Full Name: exosome component 4
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 1318 bases
Position: chrGL173373.1:122947-124264
Accession: XB-GENE-969649
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000010147	RNase_PH	PF01138.21	2.5e-18	1	1
ENSXETP00000010147	RNase_PH_C	PF03725.15	3.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000010147	-	582	-	ENSXETP00000010147	193 (aa)	-	F6UIW3

Gene Model

Click here to download ENSXETG00000004668's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000004668's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000004668	exosc4	98	76.190	ENSG00000178896	EXOSC4	77	76.190	Homo_sapiens
ENSXETG00000004668	exosc4	98	73.016	ENSAPOG00000000255	exosc4	77	73.016	Acanthochromis_polyacanthus
ENSXETG00000004668	exosc4	98	75.661	ENSAMEG00000006093	EXOSC4	77	75.661	Ailuropoda_melanoleuca
ENSXETG00000004668	exosc4	98	73.016	ENSACIG00000017924	exosc4	77	73.016	Amphilophus_citrinellus
ENSXETG00000004668	exosc4	98	73.016	ENSAOCG00000005105	exosc4	77	73.016	Amphiprion_ocellaris
ENSXETG00000004668	exosc4	98	73.016	ENSAPEG00000003972	exosc4	77	73.016	Amphiprion_percula
ENSXETG00000004668	exosc4	98	73.545	ENSATEG00000007766	exosc4	77	73.545	Anabas_testudineus
ENSXETG00000004668	exosc4	97	87.302	ENSACAG00000004017	EXOSC4	99	87.302	Anolis_carolinensis
ENSXETG00000004668	exosc4	98	76.190	ENSANAG00000026123	EXOSC4	77	76.190	Aotus_nancymaae
ENSXETG00000004668	exosc4	98	73.016	ENSACLG00000020071	exosc4	77	73.016	Astatotilapia_calliptera
ENSXETG00000004668	exosc4	95	74.457	ENSAMXG00000030867	exosc4	75	74.457	Astyanax_mexicanus
ENSXETG00000004668	exosc4	82	30.178	ENSAMXG00000026269	exosc6	61	30.178	Astyanax_mexicanus
ENSXETG00000004668	exosc4	98	76.720	ENSBTAG00000014607	EXOSC4	77	76.720	Bos_taurus
ENSXETG00000004668	exosc4	96	44.086	WBGene00007201	exos-4.1	78	44.086	Caenorhabditis_elegans
ENSXETG00000004668	exosc4	98	75.661	ENSCJAG00000021458	EXOSC4	77	75.661	Callithrix_jacchus
ENSXETG00000004668	exosc4	98	76.720	ENSCAFG00000001521	EXOSC4	77	76.720	Canis_familiaris
ENSXETG00000004668	exosc4	98	76.720	ENSCAFG00020018820	EXOSC4	77	76.720	Canis_lupus_dingo
ENSXETG00000004668	exosc4	98	77.249	ENSCHIG00000021121	EXOSC4	77	77.249	Capra_hircus
ENSXETG00000004668	exosc4	98	75.132	ENSTSYG00000029697	EXOSC4	77	75.132	Carlito_syrichta
ENSXETG00000004668	exosc4	97	76.064	ENSCAPG00000017958	EXOSC4	86	76.064	Cavia_aperea
ENSXETG00000004668	exosc4	70	30.657	ENSCPOG00000035731	EXOSC5	55	30.657	Cavia_porcellus
ENSXETG00000004668	exosc4	98	75.661	ENSCPOG00000022671	EXOSC4	77	75.661	Cavia_porcellus
ENSXETG00000004668	exosc4	98	76.190	ENSCCAG00000025515	EXOSC4	91	76.190	Cebus_capucinus
ENSXETG00000004668	exosc4	98	76.190	ENSCATG00000029965	EXOSC4	77	76.190	Cercocebus_atys
ENSXETG00000004668	exosc4	98	75.661	ENSCLAG00000014676	EXOSC4	77	75.661	Chinchilla_lanigera
ENSXETG00000004668	exosc4	98	76.190	ENSCSAG00000008802	EXOSC4	77	76.190	Chlorocebus_sabaeus
ENSXETG00000004668	exosc4	98	91.005	ENSCPBG00000018860	EXOSC4	77	91.005	Chrysemys_picta_bellii
ENSXETG00000004668	exosc4	88	55.030	ENSCING00000009562	-	68	55.030	Ciona_intestinalis
ENSXETG00000004668	exosc4	94	53.846	ENSCSAVG00000008006	-	74	53.846	Ciona_savignyi
ENSXETG00000004668	exosc4	91	31.746	ENSCSAVG00000002563	-	67	31.746	Ciona_savignyi
ENSXETG00000004668	exosc4	98	76.190	ENSCANG00000035733	EXOSC4	77	76.190	Colobus_angolensis_palliatus
ENSXETG00000004668	exosc4	85	30.357	ENSCGRG00001000899	Exosc6	61	30.357	Cricetulus_griseus_chok1gshd
ENSXETG00000004668	exosc4	98	76.720	ENSCGRG00001020452	Exosc4	77	76.720	Cricetulus_griseus_chok1gshd
ENSXETG00000004668	exosc4	98	76.720	ENSCGRG00000016505	Exosc4	77	76.720	Cricetulus_griseus_crigri
ENSXETG00000004668	exosc4	96	73.656	ENSCSEG00000010906	exosc4	76	73.656	Cynoglossus_semilaevis
ENSXETG00000004668	exosc4	94	74.176	ENSCVAG00000006625	exosc4	74	74.176	Cyprinodon_variegatus
ENSXETG00000004668	exosc4	95	75.543	ENSDARG00000103432	exosc4	76	75.543	Danio_rerio
ENSXETG00000004668	exosc4	98	75.661	ENSDNOG00000009800	EXOSC4	77	75.661	Dasypus_novemcinctus
ENSXETG00000004668	exosc4	98	76.190	ENSDORG00000008461	Exosc4	77	76.190	Dipodomys_ordii
ENSXETG00000004668	exosc4	87	54.167	FBgn0032487	Ski6	68	54.167	Drosophila_melanogaster
ENSXETG00000004668	exosc4	95	71.739	ENSEBUG00000014277	exosc4	76	71.739	Eptatretus_burgeri
ENSXETG00000004668	exosc4	98	75.661	ENSEASG00005010166	EXOSC4	77	75.661	Equus_asinus_asinus
ENSXETG00000004668	exosc4	98	75.661	ENSECAG00000013658	EXOSC4	77	75.661	Equus_caballus
ENSXETG00000004668	exosc4	80	31.098	ENSELUG00000015515	exosc6	59	31.098	Esox_lucius
ENSXETG00000004668	exosc4	98	74.074	ENSELUG00000021011	exosc4	77	74.074	Esox_lucius
ENSXETG00000004668	exosc4	98	75.132	ENSFCAG00000034465	EXOSC4	77	75.132	Felis_catus
ENSXETG00000004668	exosc4	70	30.657	ENSFDAG00000001207	EXOSC5	56	30.657	Fukomys_damarensis
ENSXETG00000004668	exosc4	98	76.190	ENSFDAG00000006708	EXOSC4	77	76.190	Fukomys_damarensis
ENSXETG00000004668	exosc4	94	72.527	ENSFHEG00000013533	exosc4	74	72.527	Fundulus_heteroclitus
ENSXETG00000004668	exosc4	98	71.958	ENSGMOG00000002113	exosc4	75	71.958	Gadus_morhua
ENSXETG00000004668	exosc4	96	72.581	ENSGAFG00000021407	exosc4	76	72.581	Gambusia_affinis
ENSXETG00000004668	exosc4	90	30.055	ENSGACG00000002690	exosc6	65	30.055	Gasterosteus_aculeatus
ENSXETG00000004668	exosc4	98	69.841	ENSGACG00000017838	exosc4	75	69.841	Gasterosteus_aculeatus
ENSXETG00000004668	exosc4	98	76.190	ENSGGOG00000040193	-	77	76.190	Gorilla_gorilla
ENSXETG00000004668	exosc4	98	76.190	ENSGGOG00000044212	-	77	76.190	Gorilla_gorilla
ENSXETG00000004668	exosc4	98	73.016	ENSHBUG00000006605	exosc4	77	73.016	Haplochromis_burtoni
ENSXETG00000004668	exosc4	70	30.657	ENSHGLG00000008975	EXOSC5	56	30.657	Heterocephalus_glaber_female
ENSXETG00000004668	exosc4	98	76.190	ENSHGLG00000016299	EXOSC4	77	76.190	Heterocephalus_glaber_female
ENSXETG00000004668	exosc4	98	76.190	ENSHGLG00100018786	EXOSC4	77	76.190	Heterocephalus_glaber_male
ENSXETG00000004668	exosc4	98	73.545	ENSHCOG00000018875	exosc4	74	73.545	Hippocampus_comes
ENSXETG00000004668	exosc4	95	74.457	ENSIPUG00000011922	Exosc4	75	74.457	Ictalurus_punctatus
ENSXETG00000004668	exosc4	97	76.064	ENSSTOG00000002632	EXOSC4	76	76.064	Ictidomys_tridecemlineatus
ENSXETG00000004668	exosc4	98	76.190	ENSJJAG00000009655	Exosc4	77	76.190	Jaculus_jaculus
ENSXETG00000004668	exosc4	96	72.581	ENSKMAG00000015373	exosc4	76	72.581	Kryptolebias_marmoratus
ENSXETG00000004668	exosc4	98	71.958	ENSLBEG00000012754	exosc4	77	71.958	Labrus_bergylta
ENSXETG00000004668	exosc4	96	75.269	ENSLOCG00000008878	exosc4	76	75.269	Lepisosteus_oculatus
ENSXETG00000004668	exosc4	82	31.737	ENSLOCG00000017597	exosc6	60	31.138	Lepisosteus_oculatus
ENSXETG00000004668	exosc4	98	75.661	ENSLAFG00000030187	EXOSC4	77	75.661	Loxodonta_africana
ENSXETG00000004668	exosc4	98	76.190	ENSMFAG00000000161	EXOSC4	77	76.190	Macaca_fascicularis
ENSXETG00000004668	exosc4	98	76.190	ENSMMUG00000007160	EXOSC4	77	76.190	Macaca_mulatta
ENSXETG00000004668	exosc4	98	76.190	ENSMNEG00000033938	EXOSC4	77	76.190	Macaca_nemestrina
ENSXETG00000004668	exosc4	98	76.190	ENSMLEG00000041197	EXOSC4	77	76.190	Mandrillus_leucophaeus
ENSXETG00000004668	exosc4	98	73.016	ENSMAMG00000014749	exosc4	77	73.016	Mastacembelus_armatus
ENSXETG00000004668	exosc4	80	31.481	ENSMAMG00000016983	exosc6	66	30.357	Mastacembelus_armatus
ENSXETG00000004668	exosc4	98	73.016	ENSMZEG00005025086	exosc4	77	73.016	Maylandia_zebra
ENSXETG00000004668	exosc4	85	30.357	ENSMAUG00000008040	Exosc6	61	30.357	Mesocricetus_auratus
ENSXETG00000004668	exosc4	98	77.778	ENSMAUG00000007911	Exosc4	77	77.778	Mesocricetus_auratus
ENSXETG00000004668	exosc4	98	77.249	ENSMOCG00000020295	Exosc4	77	77.249	Microtus_ochrogaster
ENSXETG00000004668	exosc4	96	72.581	ENSMMOG00000016779	exosc4	76	72.581	Mola_mola
ENSXETG00000004668	exosc4	81	80.255	ENSMODG00000010435	EXOSC4	73	80.255	Monodelphis_domestica
ENSXETG00000004668	exosc4	98	73.016	ENSMALG00000020564	exosc4	77	73.016	Monopterus_albus
ENSXETG00000004668	exosc4	78	30.000	ENSMALG00000007871	exosc6	54	30.000	Monopterus_albus
ENSXETG00000004668	exosc4	98	76.190	MGP_CAROLIEiJ_G0019919	Exosc4	77	76.190	Mus_caroli
ENSXETG00000004668	exosc4	98	76.190	ENSMUSG00000034259	Exosc4	77	76.190	Mus_musculus
ENSXETG00000004668	exosc4	98	76.720	MGP_PahariEiJ_G0019929	Exosc4	77	76.720	Mus_pahari
ENSXETG00000004668	exosc4	98	76.190	MGP_SPRETEiJ_G0020822	Exosc4	77	76.190	Mus_spretus
ENSXETG00000004668	exosc4	98	75.661	ENSMPUG00000007260	EXOSC4	95	75.661	Mustela_putorius_furo
ENSXETG00000004668	exosc4	98	76.720	ENSNGAG00000022428	Exosc4	77	76.720	Nannospalax_galili
ENSXETG00000004668	exosc4	98	73.016	ENSNBRG00000012326	exosc4	77	73.016	Neolamprologus_brichardi
ENSXETG00000004668	exosc4	98	76.190	ENSNLEG00000010449	EXOSC4	77	76.190	Nomascus_leucogenys
ENSXETG00000004668	exosc4	98	76.720	ENSMEUG00000011002	EXOSC4	77	76.720	Notamacropus_eugenii
ENSXETG00000004668	exosc4	97	75.000	ENSOPRG00000016625	EXOSC4	100	75.000	Ochotona_princeps
ENSXETG00000004668	exosc4	98	76.190	ENSODEG00000013951	EXOSC4	77	76.190	Octodon_degus
ENSXETG00000004668	exosc4	98	73.016	ENSONIG00000009617	exosc4	77	73.016	Oreochromis_niloticus
ENSXETG00000004668	exosc4	98	75.132	ENSOANG00000014904	EXOSC4	77	75.132	Ornithorhynchus_anatinus
ENSXETG00000004668	exosc4	64	31.200	ENSOCUG00000011497	EXOSC5	53	31.200	Oryctolagus_cuniculus
ENSXETG00000004668	exosc4	98	73.016	ENSOCUG00000021243	EXOSC4	77	73.016	Oryctolagus_cuniculus
ENSXETG00000004668	exosc4	96	73.118	ENSORLG00000017295	exosc4	76	73.118	Oryzias_latipes
ENSXETG00000004668	exosc4	96	73.118	ENSORLG00020009788	exosc4	76	73.118	Oryzias_latipes_hni
ENSXETG00000004668	exosc4	96	73.118	ENSORLG00015009754	exosc4	76	73.118	Oryzias_latipes_hsok
ENSXETG00000004668	exosc4	96	73.656	ENSOMEG00000005800	exosc4	76	73.656	Oryzias_melastigma
ENSXETG00000004668	exosc4	98	76.190	ENSOGAG00000007411	EXOSC4	77	76.190	Otolemur_garnettii
ENSXETG00000004668	exosc4	85	30.357	ENSOGAG00000034381	EXOSC6	61	30.357	Otolemur_garnettii
ENSXETG00000004668	exosc4	97	77.660	ENSOARG00000015188	EXOSC4	76	77.660	Ovis_aries
ENSXETG00000004668	exosc4	98	76.190	ENSPPAG00000035746	EXOSC4	77	76.190	Pan_paniscus
ENSXETG00000004668	exosc4	98	75.132	ENSPPRG00000019782	EXOSC4	77	75.132	Panthera_pardus
ENSXETG00000004668	exosc4	97	75.532	ENSPTIG00000020006	EXOSC4	77	75.532	Panthera_tigris_altaica
ENSXETG00000004668	exosc4	98	76.190	ENSPTRG00000020677	EXOSC4	77	76.190	Pan_troglodytes
ENSXETG00000004668	exosc4	98	76.190	ENSPANG00000023276	EXOSC4	77	76.190	Papio_anubis
ENSXETG00000004668	exosc4	96	70.968	ENSPKIG00000018362	exosc4	76	70.968	Paramormyrops_kingsleyae
ENSXETG00000004668	exosc4	98	74.074	ENSPMGG00000019307	exosc4	77	74.074	Periophthalmus_magnuspinnatus
ENSXETG00000004668	exosc4	65	30.000	ENSPMGG00000016974	exosc6	54	30.000	Periophthalmus_magnuspinnatus
ENSXETG00000004668	exosc4	98	77.778	ENSPEMG00000017031	Exosc4	77	77.778	Peromyscus_maniculatus_bairdii
ENSXETG00000004668	exosc4	97	77.128	ENSPMAG00000001175	exosc4	77	77.128	Petromyzon_marinus
ENSXETG00000004668	exosc4	98	76.190	ENSPCIG00000009102	EXOSC4	77	76.190	Phascolarctos_cinereus
ENSXETG00000004668	exosc4	96	72.581	ENSPFOG00000015214	exosc4	76	72.581	Poecilia_formosa
ENSXETG00000004668	exosc4	96	72.581	ENSPLAG00000018751	exosc4	76	72.581	Poecilia_latipinna
ENSXETG00000004668	exosc4	96	72.581	ENSPMEG00000023116	exosc4	76	72.581	Poecilia_mexicana
ENSXETG00000004668	exosc4	96	73.656	ENSPREG00000009632	exosc4	76	73.656	Poecilia_reticulata
ENSXETG00000004668	exosc4	98	75.661	ENSPPYG00000018959	EXOSC4	79	75.661	Pongo_abelii
ENSXETG00000004668	exosc4	98	76.190	ENSPCAG00000014920	EXOSC4	77	76.190	Procavia_capensis
ENSXETG00000004668	exosc4	98	75.132	ENSPCOG00000020992	EXOSC4	77	75.132	Propithecus_coquereli
ENSXETG00000004668	exosc4	98	76.720	ENSPVAG00000007100	EXOSC4	77	76.720	Pteropus_vampyrus
ENSXETG00000004668	exosc4	98	73.016	ENSPNYG00000014429	exosc4	77	73.016	Pundamilia_nyererei
ENSXETG00000004668	exosc4	96	75.135	ENSPNAG00000013750	exosc4	83	75.135	Pygocentrus_nattereri
ENSXETG00000004668	exosc4	98	77.249	ENSRNOG00000012348	Exosc4	77	77.249	Rattus_norvegicus
ENSXETG00000004668	exosc4	98	76.190	ENSRBIG00000038476	EXOSC4	77	76.190	Rhinopithecus_bieti
ENSXETG00000004668	exosc4	98	76.190	ENSRROG00000038556	EXOSC4	77	76.190	Rhinopithecus_roxellana
ENSXETG00000004668	exosc4	92	32.584	YGR195W	SKI6	72	32.584	Saccharomyces_cerevisiae
ENSXETG00000004668	exosc4	98	76.720	ENSSHAG00000005397	EXOSC4	77	76.720	Sarcophilus_harrisii
ENSXETG00000004668	exosc4	98	74.603	ENSSFOG00015004133	exosc4	77	74.603	Scleropages_formosus
ENSXETG00000004668	exosc4	98	73.545	ENSSMAG00000020020	exosc4	77	73.545	Scophthalmus_maximus
ENSXETG00000004668	exosc4	98	72.487	ENSSDUG00000018966	exosc4	77	72.487	Seriola_dumerili
ENSXETG00000004668	exosc4	84	30.233	ENSSDUG00000021109	exosc6	62	30.233	Seriola_dumerili
ENSXETG00000004668	exosc4	98	73.016	ENSSLDG00000008003	exosc4	77	73.016	Seriola_lalandi_dorsalis
ENSXETG00000004668	exosc4	96	73.514	ENSSLDG00000006678	-	94	73.514	Seriola_lalandi_dorsalis
ENSXETG00000004668	exosc4	80	31.098	ENSSLDG00000017776	exosc6	58	31.098	Seriola_lalandi_dorsalis
ENSXETG00000004668	exosc4	98	92.593	ENSSPUG00000009644	EXOSC4	93	92.593	Sphenodon_punctatus
ENSXETG00000004668	exosc4	98	72.487	ENSSPAG00000016707	exosc4	72	72.487	Stegastes_partitus
ENSXETG00000004668	exosc4	98	76.190	ENSSSCG00000005925	EXOSC4	77	76.190	Sus_scrofa
ENSXETG00000004668	exosc4	98	70.899	ENSTRUG00000025054	exosc4	77	70.899	Takifugu_rubripes
ENSXETG00000004668	exosc4	98	70.370	ENSTNIG00000008519	exosc4	77	70.370	Tetraodon_nigroviridis
ENSXETG00000004668	exosc4	80	32.484	ENSTNIG00000004018	exosc6	60	32.484	Tetraodon_nigroviridis
ENSXETG00000004668	exosc4	97	76.064	ENSTBEG00000000727	EXOSC4	100	76.064	Tupaia_belangeri
ENSXETG00000004668	exosc4	98	75.661	ENSUAMG00000020173	EXOSC4	77	75.661	Ursus_americanus
ENSXETG00000004668	exosc4	76	74.150	ENSUMAG00000020831	EXOSC4	100	74.150	Ursus_maritimus
ENSXETG00000004668	exosc4	98	76.720	ENSVVUG00000009675	EXOSC4	77	76.720	Vulpes_vulpes
ENSXETG00000004668	exosc4	96	72.043	ENSXCOG00000015017	exosc4	76	72.043	Xiphophorus_couchianus
ENSXETG00000004668	exosc4	96	72.043	ENSXMAG00000016287	exosc4	76	72.043	Xiphophorus_maculatus