EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000004681 (Gene tree)
Gene ID: -
Gene Symbol: srfbp1
Alias: -
Full Name: serum response factor binding protein 1
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 30974 bases
Position: chrGL172643.1:3692336-3723309
Accession: XB-GENE-941165
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000059449	BUD22	PF09073.10	3.5e-16	1	1
ENSXETP00000010175	BUD22	PF09073.10	1.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000010175	-	1353	-	ENSXETP00000010175	450 (aa)	-	F6TT16
ENSXETT00000065567	-	1290	-	ENSXETP00000059449	429 (aa)	-	F6PJI7

Gene Model

Click here to download ENSXETG00000004681's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000004681's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000004681	srfbp1	97	43.868	ENSG00000151304	SRFBP1	97	43.868	Homo_sapiens
ENSXETG00000004681	srfbp1	97	38.066	ENSAPOG00000021469	-	82	38.477	Acanthochromis_polyacanthus
ENSXETG00000004681	srfbp1	97	43.427	ENSAMEG00000018050	SRFBP1	97	43.864	Ailuropoda_melanoleuca
ENSXETG00000004681	srfbp1	100	40.088	ENSACIG00000019127	-	99	41.244	Amphilophus_citrinellus
ENSXETG00000004681	srfbp1	97	36.907	ENSAOCG00000002182	-	83	36.789	Amphiprion_ocellaris
ENSXETG00000004681	srfbp1	97	37.500	ENSAPEG00000003041	-	83	37.705	Amphiprion_percula
ENSXETG00000004681	srfbp1	100	36.667	ENSATEG00000007289	-	84	38.211	Anabas_testudineus
ENSXETG00000004681	srfbp1	100	43.355	ENSACAG00000003779	SRFBP1	98	43.607	Anolis_carolinensis
ENSXETG00000004681	srfbp1	99	44.595	ENSANAG00000022485	SRFBP1	100	44.595	Aotus_nancymaae
ENSXETG00000004681	srfbp1	100	37.081	ENSACLG00000013909	-	87	37.500	Astatotilapia_calliptera
ENSXETG00000004681	srfbp1	97	40.868	ENSBTAG00000014320	SRFBP1	99	40.868	Bos_taurus
ENSXETG00000004681	srfbp1	99	44.344	ENSCJAG00000017177	SRFBP1	100	44.344	Callithrix_jacchus
ENSXETG00000004681	srfbp1	100	41.126	ENSCAFG00000000512	SRFBP1	98	43.560	Canis_familiaris
ENSXETG00000004681	srfbp1	100	41.126	ENSCAFG00020009389	SRFBP1	97	43.560	Canis_lupus_dingo
ENSXETG00000004681	srfbp1	97	42.729	ENSTSYG00000008630	-	99	42.472	Carlito_syrichta
ENSXETG00000004681	srfbp1	97	32.494	ENSTSYG00000006869	-	100	32.494	Carlito_syrichta
ENSXETG00000004681	srfbp1	100	39.030	ENSCPOG00000004695	SRFBP1	97	41.723	Cavia_porcellus
ENSXETG00000004681	srfbp1	99	45.023	ENSCCAG00000032237	-	100	45.023	Cebus_capucinus
ENSXETG00000004681	srfbp1	97	44.208	ENSCATG00000040904	SRFBP1	97	44.104	Cercocebus_atys
ENSXETG00000004681	srfbp1	100	41.151	ENSCLAG00000003630	SRFBP1	97	43.488	Chinchilla_lanigera
ENSXETG00000004681	srfbp1	97	42.553	ENSCSAG00000014636	SRFBP1	97	43.972	Chlorocebus_sabaeus
ENSXETG00000004681	srfbp1	97	43.632	ENSCANG00000041298	SRFBP1	97	43.868	Colobus_angolensis_palliatus
ENSXETG00000004681	srfbp1	99	44.493	ENSCGRG00001000718	Srfbp1	97	44.396	Cricetulus_griseus_chok1gshd
ENSXETG00000004681	srfbp1	96	45.227	ENSCGRG00000010837	Srfbp1	100	44.898	Cricetulus_griseus_crigri
ENSXETG00000004681	srfbp1	73	78.125	ENSCSEG00000011789	-	85	59.055	Cynoglossus_semilaevis
ENSXETG00000004681	srfbp1	100	37.744	ENSCVAG00000013010	-	96	40.141	Cyprinodon_variegatus
ENSXETG00000004681	srfbp1	72	47.333	ENSDARG00000075323	srfbp1	67	51.200	Danio_rerio
ENSXETG00000004681	srfbp1	83	33.508	ENSDNOG00000017733	SRFBP1	100	36.232	Dasypus_novemcinctus
ENSXETG00000004681	srfbp1	82	33.248	ENSETEG00000012408	SRFBP1	100	37.791	Echinops_telfairi
ENSXETG00000004681	srfbp1	71	41.429	ENSEBUG00000007806	SRFBP1	59	41.429	Eptatretus_burgeri
ENSXETG00000004681	srfbp1	97	44.191	ENSEASG00005012421	SRFBP1	99	43.653	Equus_asinus_asinus
ENSXETG00000004681	srfbp1	99	42.857	ENSECAG00000015330	SRFBP1	99	42.634	Equus_caballus
ENSXETG00000004681	srfbp1	100	37.013	ENSEEUG00000011514	SRFBP1	99	38.621	Erinaceus_europaeus
ENSXETG00000004681	srfbp1	100	36.000	ENSELUG00000018381	-	95	36.681	Esox_lucius
ENSXETG00000004681	srfbp1	97	44.318	ENSFCAG00000035118	SRFBP1	97	44.318	Felis_catus
ENSXETG00000004681	srfbp1	96	41.379	ENSFALG00000007595	SRFBP1	100	41.609	Ficedula_albicollis
ENSXETG00000004681	srfbp1	100	39.530	ENSFDAG00000005102	SRFBP1	97	42.273	Fukomys_damarensis
ENSXETG00000004681	srfbp1	100	36.040	ENSFHEG00000000477	-	85	35.433	Fundulus_heteroclitus
ENSXETG00000004681	srfbp1	71	50.769	ENSGMOG00000012729	-	62	55.357	Gadus_morhua
ENSXETG00000004681	srfbp1	100	41.176	ENSGALG00000005316	SRFBP1	98	42.793	Gallus_gallus
ENSXETG00000004681	srfbp1	99	36.166	ENSGAFG00000018777	-	87	36.437	Gambusia_affinis
ENSXETG00000004681	srfbp1	99	38.776	ENSGACG00000009055	-	83	38.222	Gasterosteus_aculeatus
ENSXETG00000004681	srfbp1	99	42.672	ENSGAGG00000024915	SRFBP1	99	44.009	Gopherus_agassizii
ENSXETG00000004681	srfbp1	97	43.632	ENSGGOG00000007725	SRFBP1	97	43.632	Gorilla_gorilla
ENSXETG00000004681	srfbp1	68	54.918	ENSHCOG00000020644	-	82	39.521	Hippocampus_comes
ENSXETG00000004681	srfbp1	65	68.333	ENSSTOG00000029184	SRFBP1	69	68.333	Ictidomys_tridecemlineatus
ENSXETG00000004681	srfbp1	99	37.975	ENSLBEG00000013924	-	96	37.844	Labrus_bergylta
ENSXETG00000004681	srfbp1	78	35.734	ENSLACG00000004456	SRFBP1	100	35.967	Latimeria_chalumnae
ENSXETG00000004681	srfbp1	100	40.586	ENSLOCG00000008772	SRFBP1	100	39.474	Lepisosteus_oculatus
ENSXETG00000004681	srfbp1	99	43.736	ENSLAFG00000015303	SRFBP1	97	43.736	Loxodonta_africana
ENSXETG00000004681	srfbp1	97	43.868	ENSMFAG00000031263	SRFBP1	98	43.560	Macaca_fascicularis
ENSXETG00000004681	srfbp1	97	44.208	ENSMMUG00000021009	SRFBP1	99	44.208	Macaca_mulatta
ENSXETG00000004681	srfbp1	97	43.868	ENSMNEG00000040870	SRFBP1	98	43.560	Macaca_nemestrina
ENSXETG00000004681	srfbp1	81	40.108	ENSMAMG00000004632	-	87	37.166	Mastacembelus_armatus
ENSXETG00000004681	srfbp1	100	37.000	ENSMZEG00005000432	-	86	37.600	Maylandia_zebra
ENSXETG00000004681	srfbp1	97	44.218	ENSMAUG00000009431	Srfbp1	97	44.494	Mesocricetus_auratus
ENSXETG00000004681	srfbp1	99	44.619	ENSMICG00000042923	SRFBP1	99	44.470	Microcebus_murinus
ENSXETG00000004681	srfbp1	99	40.135	ENSMOCG00000006206	Srfbp1	97	44.519	Microtus_ochrogaster
ENSXETG00000004681	srfbp1	86	81.250	ENSMMOG00000021202	-	95	37.773	Mola_mola
ENSXETG00000004681	srfbp1	76	56.897	ENSMODG00000013487	-	82	56.897	Monodelphis_domestica
ENSXETG00000004681	srfbp1	99	35.453	ENSMALG00000001812	-	87	35.922	Monopterus_albus
ENSXETG00000004681	srfbp1	99	43.177	MGP_CAROLIEiJ_G0022271	Srfbp1	97	43.177	Mus_caroli
ENSXETG00000004681	srfbp1	99	42.472	ENSMUSG00000024528	Srfbp1	97	42.472	Mus_musculus
ENSXETG00000004681	srfbp1	100	41.794	MGP_PahariEiJ_G0019004	Srfbp1	97	43.736	Mus_pahari
ENSXETG00000004681	srfbp1	99	43.146	MGP_SPRETEiJ_G0023184	Srfbp1	97	42.350	Mus_spretus
ENSXETG00000004681	srfbp1	96	43.897	ENSMPUG00000013031	SRFBP1	100	44.787	Mustela_putorius_furo
ENSXETG00000004681	srfbp1	99	42.534	ENSMLUG00000009984	SRFBP1	99	42.308	Myotis_lucifugus
ENSXETG00000004681	srfbp1	99	40.909	ENSNGAG00000013229	Srfbp1	97	42.857	Nannospalax_galili
ENSXETG00000004681	srfbp1	100	39.651	ENSNBRG00000001146	-	97	40.416	Neolamprologus_brichardi
ENSXETG00000004681	srfbp1	97	43.602	ENSNLEG00000011949	SRFBP1	97	43.602	Nomascus_leucogenys
ENSXETG00000004681	srfbp1	53	61.765	ENSOPRG00000003881	-	67	61.765	Ochotona_princeps
ENSXETG00000004681	srfbp1	99	39.957	ENSODEG00000007258	SRFBP1	100	42.263	Octodon_degus
ENSXETG00000004681	srfbp1	84	39.846	ENSOANG00000010042	-	98	39.846	Ornithorhynchus_anatinus
ENSXETG00000004681	srfbp1	99	43.722	ENSOCUG00000009556	SRFBP1	97	44.622	Oryctolagus_cuniculus
ENSXETG00000004681	srfbp1	100	33.133	ENSORLG00000014234	-	86	36.743	Oryzias_latipes
ENSXETG00000004681	srfbp1	96	35.697	ENSORLG00015000238	-	81	51.969	Oryzias_latipes_hsok
ENSXETG00000004681	srfbp1	98	42.227	ENSOGAG00000032423	SRFBP1	99	42.691	Otolemur_garnettii
ENSXETG00000004681	srfbp1	97	45.154	ENSPPAG00000035848	SRFBP1	97	45.154	Pan_paniscus
ENSXETG00000004681	srfbp1	100	42.184	ENSPPRG00000001695	SRFBP1	97	44.419	Panthera_pardus
ENSXETG00000004681	srfbp1	100	42.151	ENSPTIG00000012305	SRFBP1	97	44.545	Panthera_tigris_altaica
ENSXETG00000004681	srfbp1	97	45.154	ENSPTRG00000017172	SRFBP1	97	45.154	Pan_troglodytes
ENSXETG00000004681	srfbp1	97	44.208	ENSPANG00000003799	SRFBP1	99	44.342	Papio_anubis
ENSXETG00000004681	srfbp1	100	38.067	ENSPKIG00000024291	-	98	36.965	Paramormyrops_kingsleyae
ENSXETG00000004681	srfbp1	100	41.253	ENSPSIG00000010650	SRFBP1	98	42.921	Pelodiscus_sinensis
ENSXETG00000004681	srfbp1	100	42.451	ENSPCIG00000028532	SRFBP1	94	42.955	Phascolarctos_cinereus
ENSXETG00000004681	srfbp1	100	37.764	ENSPFOG00000005272	-	87	36.504	Poecilia_formosa
ENSXETG00000004681	srfbp1	98	37.172	ENSPLAG00000018282	-	88	36.016	Poecilia_latipinna
ENSXETG00000004681	srfbp1	99	36.523	ENSPMEG00000020184	-	88	34.669	Poecilia_mexicana
ENSXETG00000004681	srfbp1	99	37.581	ENSPREG00000017248	-	97	39.815	Poecilia_reticulata
ENSXETG00000004681	srfbp1	97	43.499	ENSPPYG00000015714	SRFBP1	97	43.499	Pongo_abelii
ENSXETG00000004681	srfbp1	97	43.155	ENSPCOG00000027331	SRFBP1	99	42.630	Propithecus_coquereli
ENSXETG00000004681	srfbp1	100	38.147	ENSPNYG00000010355	-	97	40.610	Pundamilia_nyererei
ENSXETG00000004681	srfbp1	69	56.589	ENSPNAG00000029666	srfbp1	90	56.589	Pygocentrus_nattereri
ENSXETG00000004681	srfbp1	97	43.991	ENSRNOG00000014808	Srfbp1	95	44.898	Rattus_norvegicus
ENSXETG00000004681	srfbp1	97	41.509	ENSRBIG00000031064	SRFBP1	99	41.509	Rhinopithecus_bieti
ENSXETG00000004681	srfbp1	97	43.868	ENSRROG00000026932	SRFBP1	99	43.318	Rhinopithecus_roxellana
ENSXETG00000004681	srfbp1	99	44.045	ENSSBOG00000015464	-	99	43.864	Saimiri_boliviensis_boliviensis
ENSXETG00000004681	srfbp1	100	38.540	ENSSFOG00015001274	srfbp1	98	38.750	Scleropages_formosus
ENSXETG00000004681	srfbp1	100	36.040	ENSSMAG00000020630	-	85	35.882	Scophthalmus_maximus
ENSXETG00000004681	srfbp1	99	36.436	ENSSDUG00000001828	-	85	37.376	Seriola_dumerili
ENSXETG00000004681	srfbp1	97	42.790	ENSSARG00000010669	SRFBP1	99	43.418	Sorex_araneus
ENSXETG00000004681	srfbp1	97	45.958	ENSSPUG00000009204	SRFBP1	99	45.103	Sphenodon_punctatus
ENSXETG00000004681	srfbp1	100	36.711	ENSSPAG00000010728	-	84	37.670	Stegastes_partitus
ENSXETG00000004681	srfbp1	99	42.694	ENSSSCG00000022656	SRFBP1	99	43.119	Sus_scrofa
ENSXETG00000004681	srfbp1	98	41.014	ENSTNIG00000009267	-	97	42.694	Tetraodon_nigroviridis
ENSXETG00000004681	srfbp1	54	62.676	ENSTTRG00000007726	SRFBP1	60	62.676	Tursiops_truncatus
ENSXETG00000004681	srfbp1	96	44.725	ENSUAMG00000016707	SRFBP1	100	44.313	Ursus_americanus
ENSXETG00000004681	srfbp1	97	46.009	ENSUMAG00000018340	SRFBP1	99	45.647	Ursus_maritimus
ENSXETG00000004681	srfbp1	97	41.452	ENSVPAG00000005714	SRFBP1	97	44.009	Vicugna_pacos
ENSXETG00000004681	srfbp1	100	40.693	ENSVVUG00000019178	SRFBP1	100	42.790	Vulpes_vulpes
ENSXETG00000004681	srfbp1	99	35.108	ENSXCOG00000003410	-	98	36.162	Xiphophorus_couchianus
ENSXETG00000004681	srfbp1	96	36.382	ENSXMAG00000026251	-	86	36.821	Xiphophorus_maculatus