EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000004937 (Gene tree)
Gene ID: -
Gene Symbol: zc3h3
Alias: -
Full Name: Xenopus tropicalis zinc finger CCCH-type containing 3 (zc3h3)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 89544 bases
Position: chrGL173425.1:305157-394700
Accession: NM_001044484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000010773	zf-CCCH	PF00642.24	4.3e-19	1	2
ENSXETP00000010773	zf-CCCH	PF00642.24	4.3e-19	2	2
ENSXETP00000061073	zf-CCCH	PF00642.24	4.5e-19	1	2
ENSXETP00000061073	zf-CCCH	PF00642.24	4.5e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000066454	-	3675	-	ENSXETP00000061073	827 (aa)	-	F6XVR5
ENSXETT00000066165	-	3675	XM_018094683	ENSXETP00000061948	457 (aa)	XP_017950172	F6PI78
ENSXETT00000010773	-	2521	-	ENSXETP00000010773	819 (aa)	-	F6TMU1

Gene Model

Click here to download ENSXETG00000004937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000004937's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000004937	zc3h3	91	41.812	ENSG00000014164	ZC3H3	54	51.679	Homo_sapiens
ENSXETG00000004937	zc3h3	100	41.374	ENSAPOG00000011522	zc3h3	72	42.500	Acanthochromis_polyacanthus
ENSXETG00000004937	zc3h3	71	39.452	ENSAOCG00000013763	zc3h3	67	44.181	Amphiprion_ocellaris
ENSXETG00000004937	zc3h3	82	43.051	ENSATEG00000003718	zc3h3	72	43.051	Anabas_testudineus
ENSXETG00000004937	zc3h3	75	47.544	ENSANAG00000018742	ZC3H3	63	49.165	Aotus_nancymaae
ENSXETG00000004937	zc3h3	71	40.881	ENSACLG00000023035	zc3h3	64	41.516	Astatotilapia_calliptera
ENSXETG00000004937	zc3h3	55	52.155	ENSAMXG00000041805	zc3h3	59	48.496	Astyanax_mexicanus
ENSXETG00000004937	zc3h3	72	48.588	ENSBTAG00000021472	ZC3H3	69	48.785	Bos_taurus
ENSXETG00000004937	zc3h3	64	50.090	ENSCJAG00000021439	ZC3H3	55	50.826	Callithrix_jacchus
ENSXETG00000004937	zc3h3	61	48.588	ENSCAFG00000001299	ZC3H3	61	48.588	Canis_familiaris
ENSXETG00000004937	zc3h3	61	48.588	ENSCAFG00020018654	ZC3H3	53	48.588	Canis_lupus_dingo
ENSXETG00000004937	zc3h3	61	48.211	ENSCHIG00000018027	ZC3H3	63	48.211	Capra_hircus
ENSXETG00000004937	zc3h3	61	51.326	ENSTSYG00000034906	ZC3H3	53	51.326	Carlito_syrichta
ENSXETG00000004937	zc3h3	64	42.218	ENSCAPG00000013918	ZC3H3	54	43.289	Cavia_aperea
ENSXETG00000004937	zc3h3	64	49.466	ENSCPOG00000006248	ZC3H3	53	50.851	Cavia_porcellus
ENSXETG00000004937	zc3h3	64	49.275	ENSCCAG00000035267	ZC3H3	55	49.631	Cebus_capucinus
ENSXETG00000004937	zc3h3	61	51.493	ENSCATG00000020900	ZC3H3	55	50.998	Cercocebus_atys
ENSXETG00000004937	zc3h3	91	41.943	ENSCLAG00000009999	ZC3H3	60	47.213	Chinchilla_lanigera
ENSXETG00000004937	zc3h3	61	51.852	ENSCSAG00000009074	ZC3H3	54	50.903	Chlorocebus_sabaeus
ENSXETG00000004937	zc3h3	81	55.172	ENSCPBG00000019050	ZC3H3	73	55.172	Chrysemys_picta_bellii
ENSXETG00000004937	zc3h3	91	41.833	ENSCANG00000032420	ZC3H3	55	50.272	Colobus_angolensis_palliatus
ENSXETG00000004937	zc3h3	70	50.000	ENSCGRG00001016268	Zc3h3	61	50.000	Cricetulus_griseus_chok1gshd
ENSXETG00000004937	zc3h3	70	50.000	ENSCGRG00000012889	Zc3h3	61	50.000	Cricetulus_griseus_crigri
ENSXETG00000004937	zc3h3	100	35.873	ENSCSEG00000002583	zc3h3	99	36.608	Cynoglossus_semilaevis
ENSXETG00000004937	zc3h3	75	41.570	ENSDARG00000090751	zc3h3	72	44.371	Danio_rerio
ENSXETG00000004937	zc3h3	62	46.939	ENSDNOG00000031054	ZC3H3	57	47.884	Dasypus_novemcinctus
ENSXETG00000004937	zc3h3	62	50.725	ENSDORG00000023832	Zc3h3	54	52.326	Dipodomys_ordii
ENSXETG00000004937	zc3h3	74	48.276	ENSEASG00005009621	ZC3H3	60	49.242	Equus_asinus_asinus
ENSXETG00000004937	zc3h3	68	48.276	ENSECAG00000012556	ZC3H3	61	49.174	Equus_caballus
ENSXETG00000004937	zc3h3	62	43.529	ENSEEUG00000007986	ZC3H3	59	43.529	Erinaceus_europaeus
ENSXETG00000004937	zc3h3	65	49.149	ENSELUG00000024269	zc3h3	51	49.149	Esox_lucius
ENSXETG00000004937	zc3h3	74	49.000	ENSFCAG00000013238	ZC3H3	64	49.000	Felis_catus
ENSXETG00000004937	zc3h3	81	51.765	ENSFALG00000009538	ZC3H3	77	51.765	Ficedula_albicollis
ENSXETG00000004937	zc3h3	59	46.214	ENSFHEG00000017714	zc3h3	70	43.163	Fundulus_heteroclitus
ENSXETG00000004937	zc3h3	69	47.222	ENSGAFG00000014360	zc3h3	71	44.828	Gambusia_affinis
ENSXETG00000004937	zc3h3	64	50.265	ENSGGOG00000002833	ZC3H3	55	52.052	Gorilla_gorilla
ENSXETG00000004937	zc3h3	71	40.945	ENSHBUG00000004627	zc3h3	64	41.653	Haplochromis_burtoni
ENSXETG00000004937	zc3h3	64	50.267	ENSHGLG00000011234	ZC3H3	53	51.698	Heterocephalus_glaber_female
ENSXETG00000004937	zc3h3	100	38.877	ENSHGLG00100006782	ZC3H3	67	45.146	Heterocephalus_glaber_male
ENSXETG00000004937	zc3h3	66	42.039	ENSHCOG00000006579	zc3h3	97	35.972	Hippocampus_comes
ENSXETG00000004937	zc3h3	100	44.352	ENSIPUG00000006438	zc3h3	73	44.352	Ictalurus_punctatus
ENSXETG00000004937	zc3h3	69	50.685	ENSSTOG00000004358	ZC3H3	61	50.000	Ictidomys_tridecemlineatus
ENSXETG00000004937	zc3h3	70	49.328	ENSJJAG00000023757	Zc3h3	63	49.251	Jaculus_jaculus
ENSXETG00000004937	zc3h3	71	42.370	ENSKMAG00000017876	zc3h3	70	43.049	Kryptolebias_marmoratus
ENSXETG00000004937	zc3h3	82	46.885	ENSLOCG00000008621	ZC3H3	69	47.020	Lepisosteus_oculatus
ENSXETG00000004937	zc3h3	61	51.955	ENSMFAG00000036060	ZC3H3	55	50.998	Macaca_fascicularis
ENSXETG00000004937	zc3h3	73	51.955	ENSMNEG00000029433	ZC3H3	65	50.998	Macaca_nemestrina
ENSXETG00000004937	zc3h3	79	43.678	ENSMAMG00000014787	zc3h3	79	42.333	Mastacembelus_armatus
ENSXETG00000004937	zc3h3	71	40.881	ENSMZEG00005017290	zc3h3	64	41.516	Maylandia_zebra
ENSXETG00000004937	zc3h3	72	50.379	ENSMAUG00000011009	Zc3h3	63	50.379	Mesocricetus_auratus
ENSXETG00000004937	zc3h3	64	49.554	ENSMICG00000001100	ZC3H3	68	45.840	Microcebus_murinus
ENSXETG00000004937	zc3h3	70	51.772	ENSMOCG00000000733	Zc3h3	62	51.056	Microtus_ochrogaster
ENSXETG00000004937	zc3h3	70	40.734	ENSMMOG00000016823	zc3h3	70	40.035	Mola_mola
ENSXETG00000004937	zc3h3	60	51.351	ENSMODG00000011385	ZC3H3	56	51.758	Monodelphis_domestica
ENSXETG00000004937	zc3h3	72	50.669	MGP_CAROLIEiJ_G0019897	Zc3h3	63	50.286	Mus_caroli
ENSXETG00000004937	zc3h3	72	50.287	ENSMUSG00000075600	Zc3h3	63	50.287	Mus_musculus
ENSXETG00000004937	zc3h3	72	49.809	MGP_PahariEiJ_G0019905	Zc3h3	63	49.809	Mus_pahari
ENSXETG00000004937	zc3h3	72	50.478	MGP_SPRETEiJ_G0020797	Zc3h3	63	50.478	Mus_spretus
ENSXETG00000004937	zc3h3	73	48.529	ENSMPUG00000008357	ZC3H3	67	49.903	Mustela_putorius_furo
ENSXETG00000004937	zc3h3	74	50.092	ENSNGAG00000008574	Zc3h3	64	50.092	Nannospalax_galili
ENSXETG00000004937	zc3h3	73	42.726	ENSNBRG00000005454	zc3h3	62	43.665	Neolamprologus_brichardi
ENSXETG00000004937	zc3h3	91	40.141	ENSNLEG00000001681	ZC3H3	55	48.440	Nomascus_leucogenys
ENSXETG00000004937	zc3h3	60	51.357	ENSMEUG00000008554	ZC3H3	53	51.569	Notamacropus_eugenii
ENSXETG00000004937	zc3h3	66	48.966	ENSODEG00000014239	ZC3H3	56	51.002	Octodon_degus
ENSXETG00000004937	zc3h3	70	47.950	ENSOANG00000003534	-	71	47.930	Ornithorhynchus_anatinus
ENSXETG00000004937	zc3h3	77	42.595	ENSORLG00020002734	zc3h3	73	44.312	Oryzias_latipes_hni
ENSXETG00000004937	zc3h3	100	37.817	ENSORLG00015001257	zc3h3	64	43.655	Oryzias_latipes_hsok
ENSXETG00000004937	zc3h3	71	39.626	ENSOMEG00000015369	zc3h3	93	36.064	Oryzias_melastigma
ENSXETG00000004937	zc3h3	69	51.724	ENSOGAG00000014907	ZC3H3	76	51.724	Otolemur_garnettii
ENSXETG00000004937	zc3h3	59	48.148	ENSOARG00000000808	ZC3H3	62	48.148	Ovis_aries
ENSXETG00000004937	zc3h3	74	49.000	ENSPPRG00000011707	ZC3H3	64	49.000	Panthera_pardus
ENSXETG00000004937	zc3h3	91	42.741	ENSPTRG00000020655	ZC3H3	54	52.052	Pan_troglodytes
ENSXETG00000004937	zc3h3	61	51.583	ENSPANG00000016578	ZC3H3	55	50.998	Papio_anubis
ENSXETG00000004937	zc3h3	66	46.638	ENSPKIG00000002936	zc3h3	59	46.638	Paramormyrops_kingsleyae
ENSXETG00000004937	zc3h3	70	50.581	ENSPEMG00000013893	Zc3h3	63	49.905	Peromyscus_maniculatus_bairdii
ENSXETG00000004937	zc3h3	79	44.828	ENSPREG00000008923	zc3h3	71	44.828	Poecilia_reticulata
ENSXETG00000004937	zc3h3	64	49.824	ENSPPYG00000018935	ZC3H3	55	50.635	Pongo_abelii
ENSXETG00000004937	zc3h3	73	49.462	ENSPCOG00000028174	ZC3H3	62	50.947	Propithecus_coquereli
ENSXETG00000004937	zc3h3	55	74.096	ENSPVAG00000005979	ZC3H3	50	69.271	Pteropus_vampyrus
ENSXETG00000004937	zc3h3	71	40.881	ENSPNYG00000023105	zc3h3	64	41.653	Pundamilia_nyererei
ENSXETG00000004937	zc3h3	96	44.776	ENSPNAG00000009850	zc3h3	84	45.124	Pygocentrus_nattereri
ENSXETG00000004937	zc3h3	61	51.769	ENSRROG00000040493	ZC3H3	55	50.817	Rhinopithecus_roxellana
ENSXETG00000004937	zc3h3	64	50.542	ENSSBOG00000021819	ZC3H3	64	50.912	Saimiri_boliviensis_boliviensis
ENSXETG00000004937	zc3h3	69	43.870	ENSSMAG00000016302	zc3h3	74	40.472	Scophthalmus_maximus
ENSXETG00000004937	zc3h3	69	42.237	ENSSDUG00000021871	zc3h3	70	42.237	Seriola_dumerili
ENSXETG00000004937	zc3h3	59	45.059	ENSSLDG00000016166	zc3h3	71	42.070	Seriola_lalandi_dorsalis
ENSXETG00000004937	zc3h3	80	41.586	ENSSPAG00000008518	zc3h3	71	41.909	Stegastes_partitus
ENSXETG00000004937	zc3h3	80	44.310	ENSSSCG00000006956	ZC3H3	74	47.535	Sus_scrofa
ENSXETG00000004937	zc3h3	73	47.818	ENSUAMG00000012919	ZC3H3	69	47.818	Ursus_americanus
ENSXETG00000004937	zc3h3	64	47.143	ENSVVUG00000022609	ZC3H3	54	48.588	Vulpes_vulpes
ENSXETG00000004937	zc3h3	66	79.487	ENSXCOG00000005025	zc3h3	77	79.487	Xiphophorus_couchianus