EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000005018 (Gene tree)
Gene ID: -
Gene Symbol: surf6
Alias: -
Full Name: Xenopus tropicalis surfeit 6 (surf6)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 9115 bases
Position: chrGL173514.1:92749-101863
Accession: NM_001007864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000010970	SURF6	PF04935.12	7e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000010970	-	1394	XM_012968261	ENSXETP00000010970	344 (aa)	XP_012823715	Q68F76

Gene Model

Click here to download ENSXETG00000005018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000005018's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000005018	surf6	99	44.809	ENSG00000148296	SURF6	99	44.865	Homo_sapiens
ENSXETG00000005018	surf6	98	51.801	ENSAPOG00000021015	surf6	99	52.394	Acanthochromis_polyacanthus
ENSXETG00000005018	surf6	99	43.548	ENSAMEG00000011733	SURF6	100	43.280	Ailuropoda_melanoleuca
ENSXETG00000005018	surf6	98	50.279	ENSAOCG00000015839	surf6	99	53.482	Amphiprion_ocellaris
ENSXETG00000005018	surf6	98	49.721	ENSAPEG00000022442	surf6	99	53.203	Amphiprion_percula
ENSXETG00000005018	surf6	98	48.333	ENSATEG00000012640	surf6	99	50.000	Anabas_testudineus
ENSXETG00000005018	surf6	82	51.049	ENSAPLG00000005069	SURF6	85	55.124	Anas_platyrhynchos
ENSXETG00000005018	surf6	99	42.297	ENSANAG00000021046	SURF6	99	43.417	Aotus_nancymaae
ENSXETG00000005018	surf6	98	51.105	ENSACLG00000027819	surf6	99	51.412	Astatotilapia_calliptera
ENSXETG00000005018	surf6	99	48.128	ENSAMXG00000012546	surf6	99	48.248	Astyanax_mexicanus
ENSXETG00000005018	surf6	99	44.413	ENSBTAG00000011554	SURF6	99	43.526	Bos_taurus
ENSXETG00000005018	surf6	99	42.192	ENSCJAG00000017951	SURF6	99	42.204	Callithrix_jacchus
ENSXETG00000005018	surf6	99	38.202	ENSCAFG00000005159	-	99	39.045	Canis_familiaris
ENSXETG00000005018	surf6	99	40.563	ENSCAFG00000019758	-	99	42.416	Canis_familiaris
ENSXETG00000005018	surf6	99	40.563	ENSCAFG00020001156	SURF6	99	42.416	Canis_lupus_dingo
ENSXETG00000005018	surf6	99	42.818	ENSCHIG00000025220	SURF6	99	44.663	Capra_hircus
ENSXETG00000005018	surf6	99	46.301	ENSTSYG00000008431	SURF6	99	44.505	Carlito_syrichta
ENSXETG00000005018	surf6	74	49.618	ENSCAPG00000010696	SURF6	80	48.846	Cavia_aperea
ENSXETG00000005018	surf6	99	42.700	ENSCPOG00000030454	SURF6	99	43.296	Cavia_porcellus
ENSXETG00000005018	surf6	99	44.536	ENSCATG00000042004	SURF6	99	43.836	Cercocebus_atys
ENSXETG00000005018	surf6	99	43.611	ENSCLAG00000004429	SURF6	89	43.017	Chinchilla_lanigera
ENSXETG00000005018	surf6	99	42.623	ENSCSAG00000018888	-	99	43.056	Chlorocebus_sabaeus
ENSXETG00000005018	surf6	99	43.989	ENSCSAG00000015203	-	99	43.956	Chlorocebus_sabaeus
ENSXETG00000005018	surf6	99	53.482	ENSCPBG00000021169	SURF6	100	53.482	Chrysemys_picta_bellii
ENSXETG00000005018	surf6	99	45.506	ENSCGRG00000017035	Surf6	99	45.225	Cricetulus_griseus_crigri
ENSXETG00000005018	surf6	98	47.175	ENSCSEG00000015172	surf6	99	47.175	Cynoglossus_semilaevis
ENSXETG00000005018	surf6	88	53.268	ENSCVAG00000015730	surf6	93	51.757	Cyprinodon_variegatus
ENSXETG00000005018	surf6	99	45.405	ENSDARG00000035427	surf6	100	48.767	Danio_rerio
ENSXETG00000005018	surf6	99	43.575	ENSDNOG00000049519	SURF6	96	43.137	Dasypus_novemcinctus
ENSXETG00000005018	surf6	99	43.417	ENSDORG00000010761	Surf6	99	43.059	Dipodomys_ordii
ENSXETG00000005018	surf6	82	42.230	ENSETEG00000004239	SURF6	89	43.729	Echinops_telfairi
ENSXETG00000005018	surf6	99	44.538	ENSEASG00005009885	SURF6	99	44.538	Equus_asinus_asinus
ENSXETG00000005018	surf6	99	44.101	ENSECAG00000021229	SURF6	99	42.500	Equus_caballus
ENSXETG00000005018	surf6	56	50.000	ENSEEUG00000001732	-	76	51.497	Erinaceus_europaeus
ENSXETG00000005018	surf6	79	46.595	ENSEEUG00000011071	-	95	46.454	Erinaceus_europaeus
ENSXETG00000005018	surf6	99	44.818	ENSFCAG00000040914	SURF6	99	44.944	Felis_catus
ENSXETG00000005018	surf6	99	47.671	ENSFALG00000001495	SURF6	100	48.493	Ficedula_albicollis
ENSXETG00000005018	surf6	88	44.156	ENSFDAG00000007052	SURF6	84	46.642	Fukomys_damarensis
ENSXETG00000005018	surf6	98	49.722	ENSFHEG00000002290	surf6	99	51.247	Fundulus_heteroclitus
ENSXETG00000005018	surf6	99	50.273	ENSGALG00000038413	SURF6	100	47.945	Gallus_gallus
ENSXETG00000005018	surf6	98	50.423	ENSGAFG00000013618	surf6	99	49.444	Gambusia_affinis
ENSXETG00000005018	surf6	99	51.344	ENSGAGG00000010286	SURF6	100	51.344	Gopherus_agassizii
ENSXETG00000005018	surf6	99	44.809	ENSGGOG00000014426	SURF6	99	44.865	Gorilla_gorilla
ENSXETG00000005018	surf6	98	51.105	ENSHBUG00000008764	surf6	99	51.412	Haplochromis_burtoni
ENSXETG00000005018	surf6	99	43.251	ENSHGLG00000013027	SURF6	99	43.802	Heterocephalus_glaber_female
ENSXETG00000005018	surf6	78	47.794	ENSHGLG00100015654	SURF6	67	48.148	Heterocephalus_glaber_male
ENSXETG00000005018	surf6	98	46.648	ENSHCOG00000001639	surf6	99	47.899	Hippocampus_comes
ENSXETG00000005018	surf6	99	48.370	ENSIPUG00000008066	surf6	99	47.554	Ictalurus_punctatus
ENSXETG00000005018	surf6	99	41.322	ENSSTOG00000020164	SURF6	99	44.167	Ictidomys_tridecemlineatus
ENSXETG00000005018	surf6	99	43.767	ENSJJAG00000016287	Surf6	99	43.767	Jaculus_jaculus
ENSXETG00000005018	surf6	99	50.432	ENSKMAG00000009936	surf6	100	53.448	Kryptolebias_marmoratus
ENSXETG00000005018	surf6	97	48.433	ENSLBEG00000024311	surf6	99	51.136	Labrus_bergylta
ENSXETG00000005018	surf6	98	56.891	ENSLACG00000013322	SURF6	99	56.891	Latimeria_chalumnae
ENSXETG00000005018	surf6	99	51.499	ENSLOCG00000004072	surf6	100	51.404	Lepisosteus_oculatus
ENSXETG00000005018	surf6	99	44.507	ENSLAFG00000026419	SURF6	99	45.070	Loxodonta_africana
ENSXETG00000005018	surf6	74	49.430	ENSMMUG00000022339	-	77	50.190	Macaca_mulatta
ENSXETG00000005018	surf6	99	43.989	ENSMNEG00000033787	SURF6	99	43.288	Macaca_nemestrina
ENSXETG00000005018	surf6	99	43.716	ENSMLEG00000028750	SURF6	99	44.110	Mandrillus_leucophaeus
ENSXETG00000005018	surf6	98	49.319	ENSMAMG00000018269	surf6	99	51.404	Mastacembelus_armatus
ENSXETG00000005018	surf6	98	51.105	ENSMZEG00005003188	surf6	99	51.412	Maylandia_zebra
ENSXETG00000005018	surf6	99	50.270	ENSMGAG00000006371	SURF6	100	48.352	Meleagris_gallopavo
ENSXETG00000005018	surf6	99	45.961	ENSMAUG00000020676	Surf6	99	45.404	Mesocricetus_auratus
ENSXETG00000005018	surf6	99	43.681	ENSMICG00000046077	SURF6	99	43.889	Microcebus_murinus
ENSXETG00000005018	surf6	99	43.597	ENSMOCG00000011956	Surf6	99	44.818	Microtus_ochrogaster
ENSXETG00000005018	surf6	99	47.945	ENSMODG00000012744	SURF6	99	48.199	Monodelphis_domestica
ENSXETG00000005018	surf6	98	47.684	ENSMALG00000012310	surf6	99	51.549	Monopterus_albus
ENSXETG00000005018	surf6	99	44.011	MGP_CAROLIEiJ_G0023325	Surf6	99	44.847	Mus_caroli
ENSXETG00000005018	surf6	99	44.382	ENSMUSG00000036160	Surf6	99	44.290	Mus_musculus
ENSXETG00000005018	surf6	99	44.101	MGP_PahariEiJ_G0024782	Surf6	99	43.056	Mus_pahari
ENSXETG00000005018	surf6	99	43.539	MGP_SPRETEiJ_G0024242	Surf6	99	43.296	Mus_spretus
ENSXETG00000005018	surf6	98	40.710	ENSMPUG00000012416	SURF6	94	41.848	Mustela_putorius_furo
ENSXETG00000005018	surf6	99	42.978	ENSNGAG00000015358	Surf6	99	43.539	Nannospalax_galili
ENSXETG00000005018	surf6	98	51.105	ENSNBRG00000007805	surf6	99	51.412	Neolamprologus_brichardi
ENSXETG00000005018	surf6	99	43.836	ENSNLEG00000013079	SURF6	99	43.836	Nomascus_leucogenys
ENSXETG00000005018	surf6	81	73.333	ENSMEUG00000006545	-	78	73.333	Notamacropus_eugenii
ENSXETG00000005018	surf6	99	44.126	ENSODEG00000015789	SURF6	99	44.126	Octodon_degus
ENSXETG00000005018	surf6	99	51.105	ENSONIG00000011294	surf6	99	49.861	Oreochromis_niloticus
ENSXETG00000005018	surf6	99	40.833	ENSOANG00000011709	-	100	41.484	Ornithorhynchus_anatinus
ENSXETG00000005018	surf6	98	46.216	ENSORLG00000003980	surf6	85	46.216	Oryzias_latipes
ENSXETG00000005018	surf6	98	46.556	ENSORLG00020009339	surf6	85	48.451	Oryzias_latipes_hni
ENSXETG00000005018	surf6	98	47.645	ENSORLG00015016272	surf6	85	46.216	Oryzias_latipes_hsok
ENSXETG00000005018	surf6	97	48.159	ENSOMEG00000011772	surf6	86	44.595	Oryzias_melastigma
ENSXETG00000005018	surf6	99	42.897	ENSOGAG00000027199	SURF6	99	43.611	Otolemur_garnettii
ENSXETG00000005018	surf6	50	45.763	ENSOARG00000003711	SURF6	64	45.763	Ovis_aries
ENSXETG00000005018	surf6	99	43.989	ENSPPAG00000032305	SURF6	99	44.865	Pan_paniscus
ENSXETG00000005018	surf6	99	45.251	ENSPPRG00000003090	SURF6	99	44.290	Panthera_pardus
ENSXETG00000005018	surf6	99	43.989	ENSPTRG00000021514	SURF6	99	44.865	Pan_troglodytes
ENSXETG00000005018	surf6	99	43.443	ENSPANG00000026036	SURF6	99	43.836	Papio_anubis
ENSXETG00000005018	surf6	98	47.899	ENSPKIG00000025080	surf6	89	44.818	Paramormyrops_kingsleyae
ENSXETG00000005018	surf6	99	50.273	ENSPSIG00000011771	SURF6	100	51.111	Pelodiscus_sinensis
ENSXETG00000005018	surf6	72	58.964	ENSPMGG00000004798	surf6	89	57.252	Periophthalmus_magnuspinnatus
ENSXETG00000005018	surf6	99	43.716	ENSPEMG00000012589	Surf6	99	45.098	Peromyscus_maniculatus_bairdii
ENSXETG00000005018	surf6	99	47.684	ENSPCIG00000017358	SURF6	99	48.219	Phascolarctos_cinereus
ENSXETG00000005018	surf6	98	53.672	ENSPLAG00000021874	surf6	99	52.691	Poecilia_latipinna
ENSXETG00000005018	surf6	98	54.237	ENSPMEG00000009276	surf6	99	53.258	Poecilia_mexicana
ENSXETG00000005018	surf6	81	55.593	ENSPMEG00000009994	surf6	86	55.290	Poecilia_mexicana
ENSXETG00000005018	surf6	81	54.737	ENSPREG00000021969	surf6	92	49.825	Poecilia_reticulata
ENSXETG00000005018	surf6	99	43.989	ENSPPYG00000019728	SURF6	99	44.324	Pongo_abelii
ENSXETG00000005018	surf6	63	44.749	ENSPCAG00000002906	SURF6	72	45.662	Procavia_capensis
ENSXETG00000005018	surf6	99	41.111	ENSPCOG00000015707	SURF6	99	40.984	Propithecus_coquereli
ENSXETG00000005018	surf6	99	41.389	ENSPVAG00000017042	SURF6	99	43.296	Pteropus_vampyrus
ENSXETG00000005018	surf6	98	51.381	ENSPNYG00000003445	surf6	99	51.695	Pundamilia_nyererei
ENSXETG00000005018	surf6	99	46.791	ENSPNAG00000006939	surf6	99	45.161	Pygocentrus_nattereri
ENSXETG00000005018	surf6	99	42.623	ENSRNOG00000005031	Surf6	99	44.475	Rattus_norvegicus
ENSXETG00000005018	surf6	99	43.989	ENSRBIG00000028268	SURF6	99	43.836	Rhinopithecus_bieti
ENSXETG00000005018	surf6	99	43.989	ENSRROG00000012667	SURF6	99	43.836	Rhinopithecus_roxellana
ENSXETG00000005018	surf6	99	40.503	ENSSBOG00000024264	-	99	40.111	Saimiri_boliviensis_boliviensis
ENSXETG00000005018	surf6	99	48.333	ENSSHAG00000003742	SURF6	99	48.056	Sarcophilus_harrisii
ENSXETG00000005018	surf6	99	50.136	ENSSFOG00015016640	surf6	97	49.185	Scleropages_formosus
ENSXETG00000005018	surf6	98	52.646	ENSSMAG00000009846	surf6	99	52.113	Scophthalmus_maximus
ENSXETG00000005018	surf6	98	52.646	ENSSDUG00000007947	surf6	99	53.501	Seriola_dumerili
ENSXETG00000005018	surf6	98	52.089	ENSSLDG00000015027	surf6	99	52.793	Seriola_lalandi_dorsalis
ENSXETG00000005018	surf6	99	50.291	ENSSPUG00000015954	SURF6	100	51.453	Sphenodon_punctatus
ENSXETG00000005018	surf6	98	51.524	ENSSPAG00000005916	surf6	99	51.966	Stegastes_partitus
ENSXETG00000005018	surf6	99	44.068	ENSSSCG00000032106	SURF6	99	45.352	Sus_scrofa
ENSXETG00000005018	surf6	72	55.823	ENSTGUG00000005445	-	100	62.651	Taeniopygia_guttata
ENSXETG00000005018	surf6	99	46.409	ENSTGUG00000005438	-	100	51.934	Taeniopygia_guttata
ENSXETG00000005018	surf6	98	48.596	ENSTRUG00000023872	surf6	99	47.922	Takifugu_rubripes
ENSXETG00000005018	surf6	98	47.397	ENSTNIG00000007503	surf6	99	51.841	Tetraodon_nigroviridis
ENSXETG00000005018	surf6	99	43.052	ENSUAMG00000014627	SURF6	99	43.052	Ursus_americanus
ENSXETG00000005018	surf6	99	41.011	ENSVVUG00000027289	SURF6	99	42.577	Vulpes_vulpes
ENSXETG00000005018	surf6	98	52.161	ENSXCOG00000001322	surf6	99	50.997	Xiphophorus_couchianus
ENSXETG00000005018	surf6	98	49.568	ENSXMAG00000024608	surf6	99	48.851	Xiphophorus_maculatus