EuRBPDB

Description
Ensembl ID
ENSXETG00000005260 (Gene tree)
Gene ID
-
Gene Symbol
prpf38b
Alias
-
Full Name
pre-mRNA processing factor 38B
Gene Type
protein_coding
Species
Xenopus_tropicalis
Status
putative
Strand
Plus strand
Length
11828 bases
Position
chrGL172655.1:3405551-3417378
Accession
XB-GENE-5866686
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
ENSXETP00000011494PRP38PF03371.154.7e-5711
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
ENSXETT00000011494-1556-ENSXETP00000011494502 (aa)XP_002932194F6UKW2
Gene Model
Protein-Protein Interaction (PPI)
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
ENSXETG00000005260prpf38b9660.800ENSATEG00000014482-9660.569Anabas_testudineus
ENSXETG00000005260prpf38b5483.453ENSAMXG00000039494-7064.407Astyanax_mexicanus
ENSXETG00000005260prpf38b5884.918ENSBTAG00000047874PRPF38B9474.563Bos_taurus
ENSXETG00000005260prpf38b5870.915ENSCAFG00020010992-9467.761Canis_lupus_dingo
ENSXETG00000005260prpf38b5884.918ENSCHIG00000024357-9474.563Capra_hircus
ENSXETG00000005260prpf38b10062.936ENSCPOG00000039545-9474.855Cavia_porcellus
ENSXETG00000005260prpf38b5883.713ENSCLAG00000005801-9475.290Chinchilla_lanigera
ENSXETG00000005260prpf38b10067.273ENSCPBG00000028299-9474.563Chrysemys_picta_bellii
ENSXETG00000005260prpf38b8762.526ENSCSEG00000015030-9660.163Cynoglossus_semilaevis
ENSXETG00000005260prpf38b8071.256ENSETEG00000014690-9379.187Echinops_telfairi
ENSXETG00000005260prpf38b9653.696ENSELUG00000010390-9258.365Esox_lucius
ENSXETG00000005260prpf38b9856.445ENSGMOG00000012080-9658.487Gadus_morhua
ENSXETG00000005260prpf38b10067.812ENSGALG00000001972-9473.592Gallus_gallus
ENSXETG00000005260prpf38b8861.571ENSGAFG00000008943-9658.932Gambusia_affinis
ENSXETG00000005260prpf38b9670.690ENSGAGG00000001563-8877.413Gopherus_agassizii
ENSXETG00000005260prpf38b9566.148ENSHGLG00000016583PRPF38B9476.015Heterocephalus_glaber_female
ENSXETG00000005260prpf38b9566.148ENSHGLG00100015525-9475.822Heterocephalus_glaber_male
ENSXETG00000005260prpf38b9657.661ENSKMAG00000005540-9557.464Kryptolebias_marmoratus
ENSXETG00000005260prpf38b9667.913ENSLACG00000015511-8973.663Latimeria_chalumnae
ENSXETG00000005260prpf38b5491.513ENSMOCG00000020285-9473.786Microtus_ochrogaster
ENSXETG00000005260prpf38b8662.500ENSMMOG00000011639-9063.232Mola_mola
ENSXETG00000005260prpf38b6185.902ENSMODG00000002350-9885.902Monodelphis_domestica
ENSXETG00000005260prpf38b5781.787ENSMALG00000019479-9660.852Monopterus_albus
ENSXETG00000005260prpf38b9660.800ENSONIG00000010129-9660.861Oreochromis_niloticus
ENSXETG00000005260prpf38b9272.000ENSOANG00000007343-9474.627Ornithorhynchus_anatinus
ENSXETG00000005260prpf38b8859.448ENSORLG00000015621-8892.810Oryzias_latipes
ENSXETG00000005260prpf38b9660.239ENSORLG00020016276-8792.810Oryzias_latipes_hni
ENSXETG00000005260prpf38b9660.279ENSORLG00015016270-7492.810Oryzias_latipes_hsok
ENSXETG00000005260prpf38b8857.819ENSOMEG00000022050-9092.258Oryzias_melastigma
ENSXETG00000005260prpf38b5883.388ENSOGAG00000027048-9474.806Otolemur_garnettii
ENSXETG00000005260prpf38b5884.797ENSOARG00000018899-9574.460Ovis_aries
ENSXETG00000005260prpf38b9458.882ENSPKIG00000004815-9761.569Paramormyrops_kingsleyae
ENSXETG00000005260prpf38b9660.674ENSPKIG00000017291-9361.165Paramormyrops_kingsleyae
ENSXETG00000005260prpf38b9670.385ENSPSIG00000016569-8877.893Pelodiscus_sinensis
ENSXETG00000005260prpf38b8861.915ENSPFOG00000004025-8094.118Poecilia_formosa
ENSXETG00000005260prpf38b8861.915ENSPLAG00000019842-9459.792Poecilia_latipinna
ENSXETG00000005260prpf38b7867.742ENSPMEG00000004807-9259.792Poecilia_mexicana
ENSXETG00000005260prpf38b7866.998ENSPREG00000015599-8394.118Poecilia_reticulata
ENSXETG00000005260prpf38b9665.437ENSRNOG00000020438Prpf38b8975.052Rattus_norvegicus
ENSXETG00000005260prpf38b9958.602ENSSFOG00015011251-8096.732Scleropages_formosus
ENSXETG00000005260prpf38b9661.723ENSSLDG00000023487-8392.810Seriola_lalandi_dorsalis
ENSXETG00000005260prpf38b9670.633ENSSPUG00000017742-9373.684Sphenodon_punctatus
ENSXETG00000005260prpf38b5483.813ENSTRUG00000011765-9657.692Takifugu_rubripes
ENSXETG00000005260prpf38b5482.734ENSTNIG00000015299-9764.198Tetraodon_nigroviridis
ENSXETG00000005260prpf38b5481.784ENSTBEG00000007504-10070.450Tupaia_belangeri
ENSXETG00000005260prpf38b5883.934ENSTTRG00000006479-8978.029Tursiops_truncatus
ENSXETG00000005260prpf38b5476.952ENSVPAG00000005541-8969.405Vicugna_pacos
ENSXETG00000005260prpf38b7767.488ENSXCOG00000008329-9658.522Xiphophorus_couchianus
ENSXETG00000005260prpf38b7767.488ENSXMAG00000023831-9658.522Xiphophorus_maculatus