EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000005385 (Gene tree)
Gene ID: -
Gene Symbol: srsf12
Alias: -
Full Name: Xenopus tropicalis serine/arginine-rich splicing factor 12 (srsf12)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 12968 bases
Position: chrGL173317.1:469715-482682
Accession: NM_001007945
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000062498	RRM_1	PF00076.22	6.2e-16	1	1
ENSXETP00000011851	RRM_1	PF00076.22	3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000011851	-	1797	-	ENSXETP00000011851	257 (aa)	-	F7D341
ENSXETT00000065367	-	1824	-	ENSXETP00000062498	266 (aa)	-	F6ZHC7

Gene Model

Click here to download ENSXETG00000005385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000005385's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000005385	srsf12	90	71.660	ENSG00000154548	SRSF12	99	71.698	Homo_sapiens
ENSXETG00000005385	srsf12	97	68.679	ENSAMEG00000000418	SRSF12	99	68.679	Ailuropoda_melanoleuca
ENSXETG00000005385	srsf12	90	69.261	ENSANAG00000023238	SRSF12	99	69.455	Aotus_nancymaae
ENSXETG00000005385	srsf12	90	72.065	ENSBTAG00000046235	SRSF12	99	72.075	Bos_taurus
ENSXETG00000005385	srsf12	90	71.255	ENSCJAG00000038575	SRSF12	99	71.321	Callithrix_jacchus
ENSXETG00000005385	srsf12	89	70.492	ENSCAFG00000030745	SRSF12	75	70.492	Canis_familiaris
ENSXETG00000005385	srsf12	90	72.470	ENSCAFG00020015999	SRSF12	99	72.453	Canis_lupus_dingo
ENSXETG00000005385	srsf12	90	71.660	ENSCHIG00000014596	SRSF12	99	71.698	Capra_hircus
ENSXETG00000005385	srsf12	81	69.333	ENSTSYG00000001269	SRSF12	97	69.547	Carlito_syrichta
ENSXETG00000005385	srsf12	86	67.364	ENSCAPG00000001547	SRSF12	99	67.442	Cavia_aperea
ENSXETG00000005385	srsf12	81	70.222	ENSCPOG00000010917	SRSF12	99	70.370	Cavia_porcellus
ENSXETG00000005385	srsf12	90	71.660	ENSCCAG00000033029	SRSF12	99	71.698	Cebus_capucinus
ENSXETG00000005385	srsf12	90	71.660	ENSCATG00000030620	SRSF12	99	71.698	Cercocebus_atys
ENSXETG00000005385	srsf12	81	70.222	ENSCLAG00000013868	SRSF12	99	70.370	Chinchilla_lanigera
ENSXETG00000005385	srsf12	90	71.255	ENSCSAG00000017325	SRSF12	99	71.321	Chlorocebus_sabaeus
ENSXETG00000005385	srsf12	71	78.010	ENSCHOG00000013911	SRSF12	92	78.010	Choloepus_hoffmanni
ENSXETG00000005385	srsf12	82	69.469	ENSCANG00000038708	SRSF12	99	69.672	Colobus_angolensis_palliatus
ENSXETG00000005385	srsf12	88	67.078	ENSCGRG00000017064	Srsf12	99	68.313	Cricetulus_griseus_crigri
ENSXETG00000005385	srsf12	76	50.237	ENSETEG00000001386	SRSF12	99	49.794	Echinops_telfairi
ENSXETG00000005385	srsf12	90	72.065	ENSEASG00005005686	SRSF12	99	72.075	Equus_asinus_asinus
ENSXETG00000005385	srsf12	90	72.470	ENSECAG00000019135	SRSF12	99	72.453	Equus_caballus
ENSXETG00000005385	srsf12	84	74.249	ENSEEUG00000011026	SRSF12	99	70.943	Erinaceus_europaeus
ENSXETG00000005385	srsf12	97	72.075	ENSFCAG00000029256	SRSF12	99	72.075	Felis_catus
ENSXETG00000005385	srsf12	81	70.222	ENSFDAG00000003699	SRSF12	99	69.959	Fukomys_damarensis
ENSXETG00000005385	srsf12	81	69.778	ENSGGOG00000024850	SRSF12	97	69.959	Gorilla_gorilla
ENSXETG00000005385	srsf12	90	71.660	ENSHGLG00000001138	SRSF12	99	71.698	Heterocephalus_glaber_female
ENSXETG00000005385	srsf12	81	69.333	ENSHGLG00100005391	SRSF12	82	69.547	Heterocephalus_glaber_male
ENSXETG00000005385	srsf12	90	72.470	ENSSTOG00000007170	SRSF12	99	72.453	Ictidomys_tridecemlineatus
ENSXETG00000005385	srsf12	87	71.849	ENSLACG00000004376	SRSF12	100	68.864	Latimeria_chalumnae
ENSXETG00000005385	srsf12	82	69.469	ENSLAFG00000005458	SRSF12	99	69.672	Loxodonta_africana
ENSXETG00000005385	srsf12	90	71.660	ENSMFAG00000036543	SRSF12	99	71.698	Macaca_fascicularis
ENSXETG00000005385	srsf12	90	71.255	ENSMMUG00000014941	SRSF12	99	71.321	Macaca_mulatta
ENSXETG00000005385	srsf12	90	71.660	ENSMNEG00000030957	SRSF12	99	71.698	Macaca_nemestrina
ENSXETG00000005385	srsf12	89	69.262	ENSMLEG00000042204	SRSF12	99	69.262	Mandrillus_leucophaeus
ENSXETG00000005385	srsf12	94	70.155	ENSMAUG00000017845	Srsf12	80	77.778	Mesocricetus_auratus
ENSXETG00000005385	srsf12	90	72.581	ENSMICG00000034783	SRSF12	99	72.453	Microcebus_murinus
ENSXETG00000005385	srsf12	97	69.434	ENSMOCG00000006973	Srsf12	99	70.566	Microtus_ochrogaster
ENSXETG00000005385	srsf12	89	63.673	ENSMODG00000018282	SRSF12	98	66.939	Monodelphis_domestica
ENSXETG00000005385	srsf12	97	68.302	MGP_CAROLIEiJ_G0025873	-	99	69.434	Mus_caroli
ENSXETG00000005385	srsf12	97	69.057	ENSMUSG00000054679	Srsf12	99	70.189	Mus_musculus
ENSXETG00000005385	srsf12	97	68.000	MGP_PahariEiJ_G0023996	-	99	70.943	Mus_pahari
ENSXETG00000005385	srsf12	97	69.057	MGP_SPRETEiJ_G0026822	-	99	70.189	Mus_spretus
ENSXETG00000005385	srsf12	82	71.179	ENSMLUG00000001545	SRSF12	99	71.255	Myotis_lucifugus
ENSXETG00000005385	srsf12	95	69.615	ENSNGAG00000019092	Srsf12	93	72.984	Nannospalax_galili
ENSXETG00000005385	srsf12	82	69.469	ENSNLEG00000032347	SRSF12	99	69.672	Nomascus_leucogenys
ENSXETG00000005385	srsf12	88	67.901	ENSOPRG00000016052	SRSF12	99	67.901	Ochotona_princeps
ENSXETG00000005385	srsf12	90	65.992	ENSODEG00000009174	-	99	66.415	Octodon_degus
ENSXETG00000005385	srsf12	85	70.513	ENSOCUG00000000945	SRSF12	99	70.635	Oryctolagus_cuniculus
ENSXETG00000005385	srsf12	89	67.901	ENSOGAG00000006421	SRSF12	99	67.901	Otolemur_garnettii
ENSXETG00000005385	srsf12	90	65.182	ENSPPAG00000041573	SRSF12	99	66.160	Pan_paniscus
ENSXETG00000005385	srsf12	97	72.075	ENSPPRG00000018838	SRSF12	99	72.075	Panthera_pardus
ENSXETG00000005385	srsf12	90	71.660	ENSPTRG00000018415	SRSF12	99	71.698	Pan_troglodytes
ENSXETG00000005385	srsf12	90	71.255	ENSPANG00000016731	SRSF12	99	71.321	Papio_anubis
ENSXETG00000005385	srsf12	97	69.811	ENSPEMG00000006893	Srsf12	99	70.943	Peromyscus_maniculatus_bairdii
ENSXETG00000005385	srsf12	97	61.132	ENSPCIG00000021713	SRSF12	96	67.755	Phascolarctos_cinereus
ENSXETG00000005385	srsf12	90	70.040	ENSPPYG00000016837	SRSF12	99	70.189	Pongo_abelii
ENSXETG00000005385	srsf12	97	54.098	ENSPCAG00000010020	SRSF12	80	94.382	Procavia_capensis
ENSXETG00000005385	srsf12	97	71.698	ENSPCOG00000001227	SRSF12	99	71.698	Propithecus_coquereli
ENSXETG00000005385	srsf12	82	70.044	ENSPVAG00000001046	SRSF12	99	69.959	Pteropus_vampyrus
ENSXETG00000005385	srsf12	97	66.409	ENSRNOG00000051383	Srsf12	99	61.132	Rattus_norvegicus
ENSXETG00000005385	srsf12	81	69.778	ENSRBIG00000029756	SRSF12	97	69.959	Rhinopithecus_bieti
ENSXETG00000005385	srsf12	89	71.429	ENSRROG00000035967	SRSF12	99	71.483	Rhinopithecus_roxellana
ENSXETG00000005385	srsf12	82	67.373	ENSSBOG00000032399	SRSF12	99	67.717	Saimiri_boliviensis_boliviensis
ENSXETG00000005385	srsf12	81	68.584	ENSSARG00000007795	SRSF12	99	68.852	Sorex_araneus
ENSXETG00000005385	srsf12	100	69.091	ENSSPUG00000001194	SRSF12	100	69.818	Sphenodon_punctatus
ENSXETG00000005385	srsf12	90	72.470	ENSSSCG00000032781	SRSF12	99	72.453	Sus_scrofa
ENSXETG00000005385	srsf12	58	76.282	ENSTBEG00000015120	-	100	72.152	Tupaia_belangeri
ENSXETG00000005385	srsf12	88	66.255	ENSTBEG00000008665	-	99	66.255	Tupaia_belangeri
ENSXETG00000005385	srsf12	90	67.206	ENSTTRG00000003682	SRSF12	99	67.547	Tursiops_truncatus
ENSXETG00000005385	srsf12	83	66.376	ENSUMAG00000010534	SRSF12	97	66.023	Ursus_maritimus
ENSXETG00000005385	srsf12	90	65.992	ENSVPAG00000004175	SRSF12	99	66.415	Vicugna_pacos
ENSXETG00000005385	srsf12	85	68.376	ENSVVUG00000010197	SRSF12	98	68.651	Vulpes_vulpes