EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000005391 (Gene tree)
Gene ID: -
Gene Symbol: alyref
Alias: -
Full Name: Xenopus tropicalis Aly/REF export factor (alyref)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 6114 bases
Position: chrGL172918.1:1368611-1374724
Accession: NM_001017027
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000060614	RRM_1	PF00076.22	8.9e-14	1	1
ENSXETP00000011893	RRM_1	PF00076.22	1.1e-13	1	1
ENSXETP00000060614	FYTT	PF07078.11	0.00033	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000065431	-	935	-	ENSXETP00000060614	237 (aa)	-	F6TR21
ENSXETT00000011893	-	1009	-	ENSXETP00000011893	260 (aa)	-	Q28FB9

Gene Model

Click here to download ENSXETG00000005391's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000005391's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000005391	alyref	100	74.517	ENSG00000183684	ALYREF	97	75.969	Homo_sapiens
ENSXETG00000005391	alyref	100	66.423	ENSAPOG00000018455	ALYREF	100	69.708	Acanthochromis_polyacanthus
ENSXETG00000005391	alyref	79	84.492	ENSAMEG00000017463	ALYREF	74	85.326	Ailuropoda_melanoleuca
ENSXETG00000005391	alyref	100	75.479	ENSACAG00000010526	ALYREF	100	75.954	Anolis_carolinensis
ENSXETG00000005391	alyref	100	71.308	ENSANAG00000028229	-	78	68.273	Aotus_nancymaae
ENSXETG00000005391	alyref	75	85.311	ENSANAG00000022638	-	77	85.714	Aotus_nancymaae
ENSXETG00000005391	alyref	100	73.359	ENSBTAG00000008498	ALYREF	100	74.812	Bos_taurus
ENSXETG00000005391	alyref	100	73.745	ENSCJAG00000039942	ALYREF	97	75.581	Callithrix_jacchus
ENSXETG00000005391	alyref	100	73.359	ENSCAFG00000005877	ALYREF	100	75.194	Canis_familiaris
ENSXETG00000005391	alyref	100	73.359	ENSCAFG00020009815	ALYREF	100	75.194	Canis_lupus_dingo
ENSXETG00000005391	alyref	99	75.732	ENSCHIG00000017396	ALYREF	97	74.157	Capra_hircus
ENSXETG00000005391	alyref	89	74.286	ENSTSYG00000002272	ALYREF	74	82.723	Carlito_syrichta
ENSXETG00000005391	alyref	57	85.821	ENSCAPG00000014727	-	100	85.821	Cavia_aperea
ENSXETG00000005391	alyref	100	77.686	ENSCPOG00000013710	ALYREF	100	75.207	Cavia_porcellus
ENSXETG00000005391	alyref	100	73.418	ENSCCAG00000030237	-	100	71.308	Cebus_capucinus
ENSXETG00000005391	alyref	100	73.585	ENSCCAG00000020578	-	97	75.581	Cebus_capucinus
ENSXETG00000005391	alyref	100	73.745	ENSCATG00000033169	ALYREF	97	75.581	Cercocebus_atys
ENSXETG00000005391	alyref	100	75.833	ENSCLAG00000015026	ALYREF	100	77.593	Chinchilla_lanigera
ENSXETG00000005391	alyref	100	73.745	ENSCSAG00000002216	ALYREF	97	75.581	Chlorocebus_sabaeus
ENSXETG00000005391	alyref	83	81.122	ENSCANG00000034056	ALYREF	95	78.756	Colobus_angolensis_palliatus
ENSXETG00000005391	alyref	100	77.917	ENSCGRG00001018191	-	100	75.000	Cricetulus_griseus_chok1gshd
ENSXETG00000005391	alyref	80	84.127	ENSCGRG00000015871	-	96	78.500	Cricetulus_griseus_crigri
ENSXETG00000005391	alyref	69	63.842	ENSCSEG00000015438	-	96	63.842	Cynoglossus_semilaevis
ENSXETG00000005391	alyref	75	85.955	ENSDNOG00000002563	ALYREF	84	82.090	Dasypus_novemcinctus
ENSXETG00000005391	alyref	76	86.592	ENSDORG00000025849	-	73	88.333	Dipodomys_ordii
ENSXETG00000005391	alyref	75	87.640	ENSETEG00000016596	ALYREF	100	87.640	Echinops_telfairi
ENSXETG00000005391	alyref	100	73.359	ENSEASG00005005824	ALYREF	95	74.812	Equus_asinus_asinus
ENSXETG00000005391	alyref	100	73.359	ENSECAG00000018754	ALYREF	95	74.812	Equus_caballus
ENSXETG00000005391	alyref	67	72.527	ENSEEUG00000010164	ALYREF	100	76.111	Erinaceus_europaeus
ENSXETG00000005391	alyref	100	71.321	ENSFCAG00000022549	ALYREF	98	74.812	Felis_catus
ENSXETG00000005391	alyref	76	86.592	ENSFDAG00000001213	ALYREF	90	82.234	Fukomys_damarensis
ENSXETG00000005391	alyref	100	78.927	ENSGALG00000007237	ALYREF	100	79.771	Gallus_gallus
ENSXETG00000005391	alyref	100	70.611	ENSGACG00000013328	ALYREF	100	70.992	Gasterosteus_aculeatus
ENSXETG00000005391	alyref	100	81.298	ENSGAGG00000008536	ALYREF	100	81.369	Gopherus_agassizii
ENSXETG00000005391	alyref	100	74.131	ENSGGOG00000013935	ALYREF	99	74.906	Gorilla_gorilla
ENSXETG00000005391	alyref	100	75.949	ENSHGLG00000008293	ALYREF	100	76.349	Heterocephalus_glaber_female
ENSXETG00000005391	alyref	83	73.636	ENSHGLG00100006949	ALYREF	85	80.597	Heterocephalus_glaber_male
ENSXETG00000005391	alyref	100	64.684	ENSHCOG00000015046	ALYREF	100	69.517	Hippocampus_comes
ENSXETG00000005391	alyref	100	76.448	ENSJJAG00000004134	-	100	75.486	Jaculus_jaculus
ENSXETG00000005391	alyref	100	69.434	ENSLACG00000005694	ALYREF	100	72.932	Latimeria_chalumnae
ENSXETG00000005391	alyref	79	87.766	ENSLAFG00000003083	ALYREF	100	87.766	Loxodonta_africana
ENSXETG00000005391	alyref	100	76.000	ENSMFAG00000001394	ALYREF	97	77.689	Macaca_fascicularis
ENSXETG00000005391	alyref	100	73.745	ENSMMUG00000012884	ALYREF	97	75.581	Macaca_mulatta
ENSXETG00000005391	alyref	100	73.745	ENSMNEG00000043666	ALYREF	97	75.581	Macaca_nemestrina
ENSXETG00000005391	alyref	83	79.592	ENSMLEG00000043353	ALYREF	87	78.571	Mandrillus_leucophaeus
ENSXETG00000005391	alyref	100	77.778	ENSMAUG00000020552	-	100	75.720	Mesocricetus_auratus
ENSXETG00000005391	alyref	100	74.131	ENSMICG00000017403	ALYREF	97	73.962	Microcebus_murinus
ENSXETG00000005391	alyref	100	74.684	ENSMOCG00000016792	-	100	76.471	Microtus_ochrogaster
ENSXETG00000005391	alyref	99	75.758	ENSMODG00000003030	ALYREF	84	77.736	Monodelphis_domestica
ENSXETG00000005391	alyref	100	64.835	ENSMALG00000019408	ALYREF	100	67.399	Monopterus_albus
ENSXETG00000005391	alyref	100	75.581	MGP_CAROLIEiJ_G0017529	Alyref	100	75.391	Mus_caroli
ENSXETG00000005391	alyref	100	71.308	MGP_CAROLIEiJ_G0014874	Alyref2	100	70.886	Mus_caroli
ENSXETG00000005391	alyref	91	64.815	ENSMUSG00000096640	Gm4312	64	63.918	Mus_musculus
ENSXETG00000005391	alyref	100	59.623	ENSMUSG00000091779	Gm21293	100	56.061	Mus_musculus
ENSXETG00000005391	alyref	100	59.623	ENSMUSG00000097427	Gm6763	98	66.225	Mus_musculus
ENSXETG00000005391	alyref	100	59.623	ENSMUSG00000097550	Gm21304	100	56.061	Mus_musculus
ENSXETG00000005391	alyref	100	59.623	ENSMUSG00000097878	Gm8764	98	66.225	Mus_musculus
ENSXETG00000005391	alyref	100	60.976	ENSMUSG00000086727	4931428L18Rik	100	57.787	Mus_musculus
ENSXETG00000005391	alyref	100	58.736	ENSMUSG00000090854	Gm4340	100	55.224	Mus_musculus
ENSXETG00000005391	alyref	91	64.651	ENSMUSG00000091101	Gm4302	63	64.948	Mus_musculus
ENSXETG00000005391	alyref	90	64.789	ENSMUSG00000112931	Gm4303	64	64.948	Mus_musculus
ENSXETG00000005391	alyref	100	75.581	ENSMUSG00000025134	Alyref	100	75.391	Mus_musculus
ENSXETG00000005391	alyref	100	59.623	ENSMUSG00000094144	Gm21312	100	56.061	Mus_musculus
ENSXETG00000005391	alyref	100	61.134	ENSMUSG00000117091	AC153137.1	100	56.967	Mus_musculus
ENSXETG00000005391	alyref	100	59.623	ENSMUSG00000095022	Gm20765	100	56.061	Mus_musculus
ENSXETG00000005391	alyref	90	64.789	ENSMUSG00000112856	Gm4305	64	64.948	Mus_musculus
ENSXETG00000005391	alyref	90	64.789	ENSMUSG00000096744	Gm4307	64	64.948	Mus_musculus
ENSXETG00000005391	alyref	91	64.815	ENSMUSG00000094314	Gm4301	64	63.918	Mus_musculus
ENSXETG00000005391	alyref	100	71.308	ENSMUSG00000060244	Alyref2	100	71.308	Mus_musculus
ENSXETG00000005391	alyref	100	75.581	MGP_PahariEiJ_G0018655	-	100	75.391	Mus_pahari
ENSXETG00000005391	alyref	74	75.879	MGP_PahariEiJ_G0018656	-	99	76.064	Mus_pahari
ENSXETG00000005391	alyref	80	69.634	MGP_PahariEiJ_G0027254	-	85	67.539	Mus_pahari
ENSXETG00000005391	alyref	80	69.634	MGP_PahariEiJ_G0027255	-	83	67.539	Mus_pahari
ENSXETG00000005391	alyref	100	73.950	MGP_SPRETEiJ_G0015679	Alyref2	100	71.730	Mus_spretus
ENSXETG00000005391	alyref	100	75.581	MGP_SPRETEiJ_G0018373	Alyref	100	75.391	Mus_spretus
ENSXETG00000005391	alyref	75	54.626	MGP_SPRETEiJ_G0016590	-	57	73.077	Mus_spretus
ENSXETG00000005391	alyref	98	62.500	ENSMLUG00000027352	-	77	62.500	Myotis_lucifugus
ENSXETG00000005391	alyref	98	61.441	ENSMLUG00000025677	-	77	61.603	Myotis_lucifugus
ENSXETG00000005391	alyref	98	60.345	ENSMLUG00000024976	-	79	60.776	Myotis_lucifugus
ENSXETG00000005391	alyref	98	55.556	ENSMLUG00000024471	-	82	54.167	Myotis_lucifugus
ENSXETG00000005391	alyref	98	63.636	ENSMLUG00000027516	-	78	69.528	Myotis_lucifugus
ENSXETG00000005391	alyref	98	55.187	ENSMLUG00000015043	-	98	53.361	Myotis_lucifugus
ENSXETG00000005391	alyref	98	59.073	ENSMLUG00000002626	-	98	56.107	Myotis_lucifugus
ENSXETG00000005391	alyref	86	56.522	ENSMLUG00000028343	-	85	60.335	Myotis_lucifugus
ENSXETG00000005391	alyref	97	62.338	ENSMLUG00000026271	-	79	62.338	Myotis_lucifugus
ENSXETG00000005391	alyref	79	83.511	ENSMLUG00000009555	-	84	73.778	Myotis_lucifugus
ENSXETG00000005391	alyref	98	59.746	ENSMLUG00000030407	-	77	59.322	Myotis_lucifugus
ENSXETG00000005391	alyref	100	50.000	ENSMLUG00000023213	-	100	49.618	Myotis_lucifugus
ENSXETG00000005391	alyref	98	61.207	ENSMLUG00000024447	-	76	61.207	Myotis_lucifugus
ENSXETG00000005391	alyref	98	56.198	ENSMLUG00000022869	-	81	56.356	Myotis_lucifugus
ENSXETG00000005391	alyref	100	74.131	ENSNLEG00000010313	ALYREF	97	75.581	Nomascus_leucogenys
ENSXETG00000005391	alyref	87	61.611	ENSMEUG00000002210	ALYREF	89	64.390	Notamacropus_eugenii
ENSXETG00000005391	alyref	57	85.075	ENSOPRG00000005551	-	52	86.667	Ochotona_princeps
ENSXETG00000005391	alyref	100	73.664	ENSODEG00000008359	ALYREF	100	75.096	Octodon_degus
ENSXETG00000005391	alyref	100	68.148	ENSORLG00000012331	ALYREF	100	70.000	Oryzias_latipes
ENSXETG00000005391	alyref	89	74.459	ENSOGAG00000012409	ALYREF	76	88.268	Otolemur_garnettii
ENSXETG00000005391	alyref	75	85.955	ENSOARG00000017932	ALYREF	67	87.709	Ovis_aries
ENSXETG00000005391	alyref	100	71.321	ENSPPRG00000010829	ALYREF	98	74.812	Panthera_pardus
ENSXETG00000005391	alyref	65	80.519	ENSPTIG00000006399	ALYREF	70	92.126	Panthera_tigris_altaica
ENSXETG00000005391	alyref	100	74.131	ENSPTRG00000009774	ALYREF	97	75.581	Pan_troglodytes
ENSXETG00000005391	alyref	100	73.745	ENSPANG00000019265	ALYREF	97	75.581	Papio_anubis
ENSXETG00000005391	alyref	56	84.211	ENSPSIG00000017541	ALYREF	98	84.328	Pelodiscus_sinensis
ENSXETG00000005391	alyref	100	72.075	ENSPPYG00000008749	ALYREF	97	75.581	Pongo_abelii
ENSXETG00000005391	alyref	100	74.131	ENSPCOG00000020874	ALYREF	97	73.962	Propithecus_coquereli
ENSXETG00000005391	alyref	100	70.385	ENSPVAG00000017866	ALYREF	69	88.764	Pteropus_vampyrus
ENSXETG00000005391	alyref	68	72.826	ENSRNOG00000036687	Alyref	91	74.444	Rattus_norvegicus
ENSXETG00000005391	alyref	76	83.978	ENSRBIG00000039651	ALYREF	74	85.714	Rhinopithecus_bieti
ENSXETG00000005391	alyref	92	76.652	ENSRROG00000045364	ALYREF	80	83.981	Rhinopithecus_roxellana
ENSXETG00000005391	alyref	80	83.069	ENSSHAG00000010459	ALYREF	98	85.340	Sarcophilus_harrisii
ENSXETG00000005391	alyref	100	53.759	ENSSDUG00000003992	-	100	54.511	Seriola_dumerili
ENSXETG00000005391	alyref	100	54.753	ENSSLDG00000005386	-	100	55.894	Seriola_lalandi_dorsalis
ENSXETG00000005391	alyref	100	76.628	ENSSPUG00000004600	ALYREF	100	78.244	Sphenodon_punctatus
ENSXETG00000005391	alyref	100	64.364	ENSSPAG00000011178	ALYREF	97	68.000	Stegastes_partitus
ENSXETG00000005391	alyref	100	74.031	ENSSSCG00000032655	ALYREF	100	75.097	Sus_scrofa
ENSXETG00000005391	alyref	56	82.576	ENSTGUG00000003513	ALYREF	100	84.559	Taeniopygia_guttata
ENSXETG00000005391	alyref	100	67.647	ENSTRUG00000008828	ALYREF	100	68.519	Takifugu_rubripes
ENSXETG00000005391	alyref	75	85.955	ENSTBEG00000005834	ALYREF	100	87.709	Tupaia_belangeri
ENSXETG00000005391	alyref	100	70.189	ENSTTRG00000012275	ALYREF	100	73.684	Tursiops_truncatus
ENSXETG00000005391	alyref	75	77.401	ENSUAMG00000016931	ALYREF	66	71.739	Ursus_americanus
ENSXETG00000005391	alyref	75	75.706	ENSUMAG00000016384	ALYREF	65	73.743	Ursus_maritimus