EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000005539 (Gene tree)
Gene ID: -
Gene Symbol: thumpd1
Alias: -
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 2382 bases
Position: chrGL172946.1:317772-320153
Accession: XB-GENE-5742238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000012172	THUMP	PF02926.17	4.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000012172	-	873	-	ENSXETP00000012172	290 (aa)	-	F7BG12

Gene Model

Click here to download ENSXETG00000005539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000005539's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000005539	thumpd1	90	60.150	ENSG00000066654	THUMPD1	74	61.154	Homo_sapiens
ENSXETG00000005539	thumpd1	96	52.878	ENSAPOG00000008440	thumpd1	91	52.878	Acanthochromis_polyacanthus
ENSXETG00000005539	thumpd1	97	57.785	ENSAMEG00000006257	THUMPD1	80	57.785	Ailuropoda_melanoleuca
ENSXETG00000005539	thumpd1	59	68.421	ENSACIG00000024395	thumpd1	53	68.421	Amphilophus_citrinellus
ENSXETG00000005539	thumpd1	59	67.836	ENSAOCG00000003509	thumpd1	53	67.836	Amphiprion_ocellaris
ENSXETG00000005539	thumpd1	59	67.836	ENSAPEG00000010515	thumpd1	53	67.836	Amphiprion_percula
ENSXETG00000005539	thumpd1	88	51.969	ENSATEG00000004737	thumpd1	79	51.969	Anabas_testudineus
ENSXETG00000005539	thumpd1	83	65.984	ENSAPLG00000015259	THUMPD1	66	77.895	Anas_platyrhynchos
ENSXETG00000005539	thumpd1	53	71.429	ENSACAG00000022881	-	84	71.429	Anolis_carolinensis
ENSXETG00000005539	thumpd1	66	75.393	ENSACAG00000009625	-	60	75.393	Anolis_carolinensis
ENSXETG00000005539	thumpd1	97	47.586	ENSANAG00000027311	-	57	55.941	Aotus_nancymaae
ENSXETG00000005539	thumpd1	95	58.571	ENSANAG00000026882	-	78	58.571	Aotus_nancymaae
ENSXETG00000005539	thumpd1	95	45.357	ENSANAG00000027040	-	75	45.357	Aotus_nancymaae
ENSXETG00000005539	thumpd1	68	59.155	ENSACLG00000004830	thumpd1	67	59.155	Astatotilapia_calliptera
ENSXETG00000005539	thumpd1	88	52.344	ENSAMXG00000012356	thumpd1	78	52.344	Astyanax_mexicanus
ENSXETG00000005539	thumpd1	95	59.498	ENSBTAG00000047673	THUMPD1	78	59.928	Bos_taurus
ENSXETG00000005539	thumpd1	89	61.450	ENSCJAG00000009499	THUMPD1	73	61.450	Callithrix_jacchus
ENSXETG00000005539	thumpd1	91	60.517	ENSCAFG00000017985	THUMPD1	76	60.517	Canis_familiaris
ENSXETG00000005539	thumpd1	91	60.517	ENSCAFG00020021861	THUMPD1	76	60.517	Canis_lupus_dingo
ENSXETG00000005539	thumpd1	95	58.781	ENSCHIG00000010134	THUMPD1	77	58.123	Capra_hircus
ENSXETG00000005539	thumpd1	90	62.030	ENSTSYG00000011537	THUMPD1	75	62.030	Carlito_syrichta
ENSXETG00000005539	thumpd1	50	76.712	ENSCAPG00000015086	-	81	76.712	Cavia_aperea
ENSXETG00000005539	thumpd1	91	61.509	ENSCPOG00000008919	-	75	60.300	Cavia_porcellus
ENSXETG00000005539	thumpd1	91	61.509	ENSCPOG00000023684	-	75	60.300	Cavia_porcellus
ENSXETG00000005539	thumpd1	96	59.220	ENSCCAG00000030205	THUMPD1	77	59.220	Cebus_capucinus
ENSXETG00000005539	thumpd1	95	56.584	ENSCCAG00000019379	-	69	56.071	Cebus_capucinus
ENSXETG00000005539	thumpd1	88	54.023	ENSCATG00000020844	-	73	54.023	Cercocebus_atys
ENSXETG00000005539	thumpd1	90	59.398	ENSCATG00000040309	THUMPD1	74	60.385	Cercocebus_atys
ENSXETG00000005539	thumpd1	88	61.538	ENSCLAG00000016508	THUMPD1	73	60.769	Chinchilla_lanigera
ENSXETG00000005539	thumpd1	90	59.398	ENSCSAG00000007610	THUMPD1	74	60.385	Chlorocebus_sabaeus
ENSXETG00000005539	thumpd1	91	60.073	ENSCHOG00000005587	THUMPD1	73	60.769	Choloepus_hoffmanni
ENSXETG00000005539	thumpd1	94	64.029	ENSCPBG00000019055	THUMPD1	79	64.029	Chrysemys_picta_bellii
ENSXETG00000005539	thumpd1	77	67.544	ENSCANG00000038770	THUMPD1	58	77.143	Colobus_angolensis_palliatus
ENSXETG00000005539	thumpd1	78	59.471	ENSCANG00000035822	-	74	59.471	Colobus_angolensis_palliatus
ENSXETG00000005539	thumpd1	93	60.364	ENSCGRG00001014829	Thumpd1	78	60.145	Cricetulus_griseus_chok1gshd
ENSXETG00000005539	thumpd1	93	60.364	ENSCGRG00000000060	Thumpd1	78	60.145	Cricetulus_griseus_crigri
ENSXETG00000005539	thumpd1	70	58.738	ENSCSEG00000002041	thumpd1	95	47.973	Cynoglossus_semilaevis
ENSXETG00000005539	thumpd1	98	51.228	ENSCVAG00000014960	thumpd1	62	62.069	Cyprinodon_variegatus
ENSXETG00000005539	thumpd1	68	54.146	ENSDARG00000100264	thumpd1	50	58.480	Danio_rerio
ENSXETG00000005539	thumpd1	97	57.877	ENSDNOG00000043510	THUMPD1	78	58.423	Dasypus_novemcinctus
ENSXETG00000005539	thumpd1	88	61.597	ENSDORG00000028216	Thumpd1	74	60.837	Dipodomys_ordii
ENSXETG00000005539	thumpd1	60	36.464	FBgn0035532	CG15014	55	36.464	Drosophila_melanogaster
ENSXETG00000005539	thumpd1	89	55.985	ENSETEG00000002763	THUMPD1	61	55.985	Echinops_telfairi
ENSXETG00000005539	thumpd1	89	61.628	ENSECAG00000005354	THUMPD1	72	60.465	Equus_caballus
ENSXETG00000005539	thumpd1	96	60.289	ENSEEUG00000011256	THUMPD1	68	59.857	Erinaceus_europaeus
ENSXETG00000005539	thumpd1	91	60.517	ENSFCAG00000039296	THUMPD1	76	60.517	Felis_catus
ENSXETG00000005539	thumpd1	66	77.487	ENSFALG00000014029	THUMPD1	68	77.249	Ficedula_albicollis
ENSXETG00000005539	thumpd1	98	51.579	ENSGMOG00000003369	thumpd1	88	50.526	Gadus_morhua
ENSXETG00000005539	thumpd1	56	72.254	ENSGALG00000031384	-	79	72.254	Gallus_gallus
ENSXETG00000005539	thumpd1	61	65.909	ENSGAFG00000011000	thumpd1	54	66.667	Gambusia_affinis
ENSXETG00000005539	thumpd1	98	48.639	ENSGACG00000019511	thumpd1	90	48.639	Gasterosteus_aculeatus
ENSXETG00000005539	thumpd1	90	63.774	ENSGAGG00000008225	THUMPD1	73	70.213	Gopherus_agassizii
ENSXETG00000005539	thumpd1	67	57.216	ENSGGOG00000043232	-	60	57.216	Gorilla_gorilla
ENSXETG00000005539	thumpd1	90	59.774	ENSGGOG00000005231	-	59	60.769	Gorilla_gorilla
ENSXETG00000005539	thumpd1	98	47.557	ENSHBUG00000017996	thumpd1	67	59.155	Haplochromis_burtoni
ENSXETG00000005539	thumpd1	94	60.145	ENSHGLG00000011001	-	77	59.420	Heterocephalus_glaber_female
ENSXETG00000005539	thumpd1	94	60.507	ENSHGLG00100016023	THUMPD1	77	59.783	Heterocephalus_glaber_male
ENSXETG00000005539	thumpd1	81	46.835	ENSHCOG00000008618	thumpd1	54	46.552	Hippocampus_comes
ENSXETG00000005539	thumpd1	88	47.529	ENSIPUG00000012500	thumpd1	69	43.686	Ictalurus_punctatus
ENSXETG00000005539	thumpd1	90	61.278	ENSSTOG00000007011	THUMPD1	75	61.278	Ictidomys_tridecemlineatus
ENSXETG00000005539	thumpd1	90	59.623	ENSJJAG00000004295	-	73	60.618	Jaculus_jaculus
ENSXETG00000005539	thumpd1	89	52.091	ENSLBEG00000009349	thumpd1	63	61.275	Labrus_bergylta
ENSXETG00000005539	thumpd1	64	65.054	ENSLOCG00000000854	thumpd1	85	51.880	Lepisosteus_oculatus
ENSXETG00000005539	thumpd1	90	62.595	ENSLAFG00000025838	THUMPD1	73	62.595	Loxodonta_africana
ENSXETG00000005539	thumpd1	78	57.391	ENSMFAG00000041474	-	73	57.391	Macaca_fascicularis
ENSXETG00000005539	thumpd1	90	59.398	ENSMFAG00000036996	THUMPD1	74	60.385	Macaca_fascicularis
ENSXETG00000005539	thumpd1	90	59.398	ENSMMUG00000004225	THUMPD1	74	60.385	Macaca_mulatta
ENSXETG00000005539	thumpd1	78	56.957	ENSMMUG00000038414	-	73	56.957	Macaca_mulatta
ENSXETG00000005539	thumpd1	90	59.398	ENSMNEG00000020726	THUMPD1	74	60.385	Macaca_nemestrina
ENSXETG00000005539	thumpd1	78	56.957	ENSMNEG00000038856	-	73	56.957	Macaca_nemestrina
ENSXETG00000005539	thumpd1	90	59.398	ENSMLEG00000036436	THUMPD1	74	60.385	Mandrillus_leucophaeus
ENSXETG00000005539	thumpd1	79	57.576	ENSMLEG00000030012	-	74	57.576	Mandrillus_leucophaeus
ENSXETG00000005539	thumpd1	89	49.425	ENSMAMG00000006858	thumpd1	53	63.743	Mastacembelus_armatus
ENSXETG00000005539	thumpd1	98	47.557	ENSMZEG00005013693	thumpd1	67	59.155	Maylandia_zebra
ENSXETG00000005539	thumpd1	67	77.949	ENSMGAG00000010340	THUMPD1	92	77.249	Meleagris_gallopavo
ENSXETG00000005539	thumpd1	93	60.000	ENSMAUG00000013306	Thumpd1	80	58.304	Mesocricetus_auratus
ENSXETG00000005539	thumpd1	93	60.073	ENSMICG00000038483	-	77	60.073	Microcebus_murinus
ENSXETG00000005539	thumpd1	77	60.090	ENSMICG00000030865	-	53	64.894	Microcebus_murinus
ENSXETG00000005539	thumpd1	93	61.455	ENSMOCG00000003447	Thumpd1	78	61.232	Microtus_ochrogaster
ENSXETG00000005539	thumpd1	100	48.639	ENSMMOG00000011323	thumpd1	86	48.639	Mola_mola
ENSXETG00000005539	thumpd1	66	75.916	ENSMODG00000024776	-	52	75.916	Monodelphis_domestica
ENSXETG00000005539	thumpd1	66	75.393	ENSMODG00000006971	-	52	75.393	Monodelphis_domestica
ENSXETG00000005539	thumpd1	88	51.969	ENSMALG00000019522	thumpd1	81	51.969	Monopterus_albus
ENSXETG00000005539	thumpd1	93	61.818	MGP_CAROLIEiJ_G0030382	Thumpd1	79	61.594	Mus_caroli
ENSXETG00000005539	thumpd1	93	61.818	ENSMUSG00000030942	Thumpd1	79	61.594	Mus_musculus
ENSXETG00000005539	thumpd1	89	63.774	MGP_PahariEiJ_G0013593	Thumpd1	75	63.774	Mus_pahari
ENSXETG00000005539	thumpd1	86	63.855	ENSMLUG00000010547	THUMPD1	70	63.855	Myotis_lucifugus
ENSXETG00000005539	thumpd1	88	62.692	ENSNGAG00000018643	Thumpd1	74	62.692	Nannospalax_galili
ENSXETG00000005539	thumpd1	98	48.197	ENSNBRG00000006987	thumpd1	73	54.800	Neolamprologus_brichardi
ENSXETG00000005539	thumpd1	90	60.150	ENSNLEG00000012369	THUMPD1	74	61.154	Nomascus_leucogenys
ENSXETG00000005539	thumpd1	88	61.154	ENSODEG00000012360	THUMPD1	73	60.385	Octodon_degus
ENSXETG00000005539	thumpd1	89	51.698	ENSONIG00000000146	thumpd1	60	68.421	Oreochromis_niloticus
ENSXETG00000005539	thumpd1	90	64.394	ENSOANG00000014297	THUMPD1	73	64.015	Ornithorhynchus_anatinus
ENSXETG00000005539	thumpd1	52	71.053	ENSOCUG00000025354	-	69	71.053	Oryctolagus_cuniculus
ENSXETG00000005539	thumpd1	93	58.974	ENSOCUG00000009895	-	78	58.974	Oryctolagus_cuniculus
ENSXETG00000005539	thumpd1	95	49.821	ENSORLG00000027557	thumpd1	60	63.298	Oryzias_latipes
ENSXETG00000005539	thumpd1	99	48.789	ENSORLG00020010206	thumpd1	64	61.111	Oryzias_latipes_hni
ENSXETG00000005539	thumpd1	99	48.789	ENSORLG00015009581	thumpd1	64	61.111	Oryzias_latipes_hsok
ENSXETG00000005539	thumpd1	92	51.301	ENSOMEG00000019361	thumpd1	81	50.558	Oryzias_melastigma
ENSXETG00000005539	thumpd1	88	61.538	ENSOGAG00000026723	THUMPD1	73	61.538	Otolemur_garnettii
ENSXETG00000005539	thumpd1	96	59.567	ENSOARG00000013107	THUMPD1	77	59.567	Ovis_aries
ENSXETG00000005539	thumpd1	90	60.150	ENSPPAG00000033818	-	59	61.154	Pan_paniscus
ENSXETG00000005539	thumpd1	78	57.522	ENSPPAG00000001653	-	69	57.522	Pan_paniscus
ENSXETG00000005539	thumpd1	91	60.148	ENSPPRG00000014118	-	76	60.148	Panthera_pardus
ENSXETG00000005539	thumpd1	91	60.148	ENSPTIG00000013856	-	76	60.148	Panthera_tigris_altaica
ENSXETG00000005539	thumpd1	76	58.824	ENSPTRG00000046073	-	62	60.766	Pan_troglodytes
ENSXETG00000005539	thumpd1	90	60.150	ENSPTRG00000007848	THUMPD1	59	61.154	Pan_troglodytes
ENSXETG00000005539	thumpd1	90	59.398	ENSPANG00000025507	THUMPD1	74	60.385	Papio_anubis
ENSXETG00000005539	thumpd1	78	57.826	ENSPANG00000034881	-	73	57.826	Papio_anubis
ENSXETG00000005539	thumpd1	93	52.963	ENSPKIG00000014491	thumpd1	82	52.416	Paramormyrops_kingsleyae
ENSXETG00000005539	thumpd1	81	70.638	ENSPSIG00000012430	THUMPD1	81	70.638	Pelodiscus_sinensis
ENSXETG00000005539	thumpd1	95	50.179	ENSPMGG00000014479	thumpd1	96	49.281	Periophthalmus_magnuspinnatus
ENSXETG00000005539	thumpd1	59	52.941	ENSPEMG00000002608	-	68	53.529	Peromyscus_maniculatus_bairdii
ENSXETG00000005539	thumpd1	74	48.611	ENSPMAG00000001389	thumpd1	99	48.611	Petromyzon_marinus
ENSXETG00000005539	thumpd1	61	66.102	ENSPFOG00000012649	thumpd1	54	66.860	Poecilia_formosa
ENSXETG00000005539	thumpd1	61	65.909	ENSPLAG00000000137	thumpd1	53	66.667	Poecilia_latipinna
ENSXETG00000005539	thumpd1	61	65.909	ENSPMEG00000007750	thumpd1	53	66.667	Poecilia_mexicana
ENSXETG00000005539	thumpd1	66	61.735	ENSPREG00000000144	thumpd1	64	62.304	Poecilia_reticulata
ENSXETG00000005539	thumpd1	74	71.759	ENSPPYG00000007160	-	69	72.821	Pongo_abelii
ENSXETG00000005539	thumpd1	74	71.163	ENSPCAG00000001534	THUMPD1	69	73.711	Procavia_capensis
ENSXETG00000005539	thumpd1	96	59.011	ENSPCOG00000024663	THUMPD1	78	60.215	Propithecus_coquereli
ENSXETG00000005539	thumpd1	90	55.263	ENSPVAG00000005659	-	74	55.263	Pteropus_vampyrus
ENSXETG00000005539	thumpd1	98	47.557	ENSPNYG00000007061	thumpd1	66	59.155	Pundamilia_nyererei
ENSXETG00000005539	thumpd1	98	51.370	ENSPNAG00000024872	thumpd1	96	51.370	Pygocentrus_nattereri
ENSXETG00000005539	thumpd1	53	75.974	ENSRNOG00000014946	AABR07005588.1	70	75.974	Rattus_norvegicus
ENSXETG00000005539	thumpd1	90	59.398	ENSRBIG00000040752	THUMPD1	74	60.385	Rhinopithecus_bieti
ENSXETG00000005539	thumpd1	72	63.810	ENSRBIG00000040136	-	76	59.912	Rhinopithecus_bieti
ENSXETG00000005539	thumpd1	72	63.810	ENSRROG00000045699	-	76	59.912	Rhinopithecus_roxellana
ENSXETG00000005539	thumpd1	90	59.398	ENSRROG00000042189	THUMPD1	74	60.385	Rhinopithecus_roxellana
ENSXETG00000005539	thumpd1	95	59.286	ENSSBOG00000034246	THUMPD1	78	59.286	Saimiri_boliviensis_boliviensis
ENSXETG00000005539	thumpd1	84	65.574	ENSSHAG00000003853	THUMPD1	76	60.440	Sarcophilus_harrisii
ENSXETG00000005539	thumpd1	59	56.471	ENSSFOG00015007512	thumpd1	50	56.471	Scleropages_formosus
ENSXETG00000005539	thumpd1	93	50.186	ENSSMAG00000000723	thumpd1	83	49.458	Scophthalmus_maximus
ENSXETG00000005539	thumpd1	59	66.667	ENSSDUG00000014502	thumpd1	53	66.667	Seriola_dumerili
ENSXETG00000005539	thumpd1	59	66.667	ENSSLDG00000007694	thumpd1	53	66.667	Seriola_lalandi_dorsalis
ENSXETG00000005539	thumpd1	96	62.021	ENSSPUG00000005096	THUMPD1	83	74.000	Sphenodon_punctatus
ENSXETG00000005539	thumpd1	59	68.421	ENSSPAG00000006993	thumpd1	54	68.421	Stegastes_partitus
ENSXETG00000005539	thumpd1	95	59.643	ENSSSCG00000024748	THUMPD1	78	59.643	Sus_scrofa
ENSXETG00000005539	thumpd1	83	64.609	ENSTGUG00000009247	THUMPD1	68	76.720	Taeniopygia_guttata
ENSXETG00000005539	thumpd1	89	51.908	ENSTRUG00000015656	thumpd1	82	52.091	Takifugu_rubripes
ENSXETG00000005539	thumpd1	97	48.951	ENSTNIG00000001584	thumpd1	93	49.301	Tetraodon_nigroviridis
ENSXETG00000005539	thumpd1	93	59.926	ENSTBEG00000005252	THUMPD1	65	62.162	Tupaia_belangeri
ENSXETG00000005539	thumpd1	88	62.308	ENSTTRG00000016435	THUMPD1	73	62.308	Tursiops_truncatus
ENSXETG00000005539	thumpd1	57	58.333	ENSUAMG00000005779	-	73	58.333	Ursus_americanus
ENSXETG00000005539	thumpd1	94	59.712	ENSVPAG00000003422	THUMPD1	79	59.712	Vicugna_pacos
ENSXETG00000005539	thumpd1	91	60.517	ENSVVUG00000023241	THUMPD1	75	60.517	Vulpes_vulpes
ENSXETG00000005539	thumpd1	61	64.773	ENSXMAG00000026052	thumpd1	54	65.497	Xiphophorus_maculatus