EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000005590 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 1248 bases
Position: chrGL172735.1:290597-291844
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000058760	zf-CCHC	PF00098.23	6.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000062048	-	891	-	ENSXETP00000058760	296 (aa)	-	F6RBH0

Gene Model

Click here to download ENSXETG00000005590's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000005590's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000005590	-	58	55.747	ENSXETG00000032297	-	92	55.747
ENSXETG00000005590	-	58	49.425	ENSXETG00000033661	-	92	49.425
ENSXETG00000005590	-	58	82.659	ENSXETG00000031539	-	92	82.659
ENSXETG00000005590	-	58	55.747	ENSXETG00000031282	-	92	55.747
ENSXETG00000005590	-	58	55.747	ENSXETG00000032402	-	92	55.747
ENSXETG00000005590	-	58	48.276	ENSXETG00000030911	-	92	48.276
ENSXETG00000005590	-	100	99.324	ENSXETG00000033341	-	96	99.180
ENSXETG00000005590	-	58	49.425	ENSXETG00000033553	-	92	49.425
ENSXETG00000005590	-	58	49.425	ENSXETG00000034120	-	92	49.425
ENSXETG00000005590	-	58	50.000	ENSXETG00000034004	-	92	50.000
ENSXETG00000005590	-	58	49.425	ENSXETG00000033566	-	92	49.425

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000005590	-	100	35.179	ENSG00000247315	ZCCHC3	63	38.340	Homo_sapiens
ENSXETG00000005590	-	85	37.066	ENSAMEG00000013999	ZCCHC3	84	37.066	Ailuropoda_melanoleuca
ENSXETG00000005590	-	100	35.082	ENSANAG00000013484	ZCCHC3	74	34.884	Aotus_nancymaae
ENSXETG00000005590	-	50	34.416	ENSACLG00000014014	-	72	34.416	Astatotilapia_calliptera
ENSXETG00000005590	-	74	31.140	ENSACLG00000019815	-	55	31.140	Astatotilapia_calliptera
ENSXETG00000005590	-	50	34.416	ENSACLG00000015881	-	74	34.416	Astatotilapia_calliptera
ENSXETG00000005590	-	74	32.456	ENSACLG00000019767	-	54	32.456	Astatotilapia_calliptera
ENSXETG00000005590	-	55	33.728	ENSACLG00000011316	-	80	33.728	Astatotilapia_calliptera
ENSXETG00000005590	-	50	30.464	ENSAMXG00000035711	-	75	30.464	Astyanax_mexicanus
ENSXETG00000005590	-	74	30.631	ENSAMXG00000035044	-	61	30.631	Astyanax_mexicanus
ENSXETG00000005590	-	100	34.768	ENSBTAG00000002116	ZCCHC3	74	34.768	Bos_taurus
ENSXETG00000005590	-	100	35.216	ENSCJAG00000020839	ZCCHC3	74	35.216	Callithrix_jacchus
ENSXETG00000005590	-	81	37.402	ENSCAFG00000025206	ZCCHC3	87	37.402	Canis_familiaris
ENSXETG00000005590	-	100	33.667	ENSCAFG00020004076	ZCCHC3	64	37.743	Canis_lupus_dingo
ENSXETG00000005590	-	100	33.333	ENSCHIG00000009882	ZCCHC3	74	34.437	Capra_hircus
ENSXETG00000005590	-	74	39.640	ENSCPOG00000023974	ZCCHC3	64	37.450	Cavia_porcellus
ENSXETG00000005590	-	100	33.667	ENSCCAG00000016869	ZCCHC3	74	35.099	Cebus_capucinus
ENSXETG00000005590	-	100	34.000	ENSCATG00000022200	ZCCHC3	74	34.551	Cercocebus_atys
ENSXETG00000005590	-	78	38.298	ENSCLAG00000000269	ZCCHC3	59	38.298	Chinchilla_lanigera
ENSXETG00000005590	-	100	33.667	ENSCSAG00000018761	ZCCHC3	74	34.219	Chlorocebus_sabaeus
ENSXETG00000005590	-	81	37.959	ENSCANG00000010812	ZCCHC3	89	37.959	Colobus_angolensis_palliatus
ENSXETG00000005590	-	100	33.444	ENSCGRG00001009163	-	63	37.154	Cricetulus_griseus_chok1gshd
ENSXETG00000005590	-	98	33.446	ENSCGRG00001011895	-	70	36.111	Cricetulus_griseus_chok1gshd
ENSXETG00000005590	-	98	33.446	ENSCGRG00000008273	-	70	36.111	Cricetulus_griseus_crigri
ENSXETG00000005590	-	100	33.227	ENSDNOG00000047357	ZCCHC3	74	34.768	Dasypus_novemcinctus
ENSXETG00000005590	-	74	39.640	ENSEASG00005003629	ZCCHC3	74	34.551	Equus_asinus_asinus
ENSXETG00000005590	-	74	39.640	ENSECAG00000001035	ZCCHC3	74	34.551	Equus_caballus
ENSXETG00000005590	-	70	31.481	ENSELUG00000017799	-	70	31.481	Esox_lucius
ENSXETG00000005590	-	100	34.641	ENSFCAG00000026760	ZCCHC3	63	37.743	Felis_catus
ENSXETG00000005590	-	62	42.246	ENSGGOG00000044213	ZCCHC3	57	42.246	Gorilla_gorilla
ENSXETG00000005590	-	52	32.704	ENSHBUG00000001589	-	81	32.704	Haplochromis_burtoni
ENSXETG00000005590	-	78	38.298	ENSHGLG00000019351	ZCCHC3	59	38.298	Heterocephalus_glaber_female
ENSXETG00000005590	-	77	36.596	ENSHGLG00100009699	ZCCHC3	67	36.596	Heterocephalus_glaber_male
ENSXETG00000005590	-	69	33.649	ENSIPUG00000000506	-	55	33.649	Ictalurus_punctatus
ENSXETG00000005590	-	74	39.640	ENSJJAG00000020375	Zcchc3	59	37.603	Jaculus_jaculus
ENSXETG00000005590	-	67	35.149	ENSLACG00000000032	-	57	35.149	Latimeria_chalumnae
ENSXETG00000005590	-	68	35.294	ENSLACG00000022551	-	53	35.294	Latimeria_chalumnae
ENSXETG00000005590	-	94	32.270	ENSLACG00000012103	-	66	36.444	Latimeria_chalumnae
ENSXETG00000005590	-	79	34.454	ENSLACG00000002300	-	72	34.454	Latimeria_chalumnae
ENSXETG00000005590	-	76	37.885	ENSLACG00000002973	-	59	37.885	Latimeria_chalumnae
ENSXETG00000005590	-	75	35.111	ENSLACG00000002864	-	75	35.111	Latimeria_chalumnae
ENSXETG00000005590	-	92	31.786	ENSLACG00000003445	-	56	34.498	Latimeria_chalumnae
ENSXETG00000005590	-	82	36.735	ENSLACG00000003328	-	87	36.735	Latimeria_chalumnae
ENSXETG00000005590	-	76	36.681	ENSLACG00000022202	-	57	36.681	Latimeria_chalumnae
ENSXETG00000005590	-	73	36.986	ENSLACG00000012216	-	71	36.986	Latimeria_chalumnae
ENSXETG00000005590	-	54	35.862	ENSLOCG00000000632	-	89	35.862	Lepisosteus_oculatus
ENSXETG00000005590	-	55	31.138	ENSLOCG00000017639	-	92	31.138	Lepisosteus_oculatus
ENSXETG00000005590	-	55	31.138	ENSLOCG00000017303	-	88	31.138	Lepisosteus_oculatus
ENSXETG00000005590	-	53	31.481	ENSLOCG00000017302	-	94	31.481	Lepisosteus_oculatus
ENSXETG00000005590	-	55	34.118	ENSLOCG00000017503	-	93	34.118	Lepisosteus_oculatus
ENSXETG00000005590	-	51	33.121	ENSLOCG00000017328	-	91	33.121	Lepisosteus_oculatus
ENSXETG00000005590	-	55	30.539	ENSLOCG00000017670	-	92	30.539	Lepisosteus_oculatus
ENSXETG00000005590	-	74	39.189	ENSLAFG00000030593	ZCCHC3	90	37.143	Loxodonta_africana
ENSXETG00000005590	-	100	34.000	ENSMFAG00000044780	ZCCHC3	63	38.095	Macaca_fascicularis
ENSXETG00000005590	-	100	34.000	ENSMMUG00000038935	ZCCHC3	63	38.095	Macaca_mulatta
ENSXETG00000005590	-	100	34.000	ENSMNEG00000000405	ZCCHC3	63	38.095	Macaca_nemestrina
ENSXETG00000005590	-	51	34.395	ENSMZEG00005028130	-	74	34.395	Maylandia_zebra
ENSXETG00000005590	-	74	32.456	ENSMZEG00005028125	-	54	32.456	Maylandia_zebra
ENSXETG00000005590	-	74	30.263	ENSMZEG00005025868	-	54	30.263	Maylandia_zebra
ENSXETG00000005590	-	68	31.100	ENSMZEG00005008237	-	59	31.100	Maylandia_zebra
ENSXETG00000005590	-	54	34.337	ENSMZEG00005028553	-	79	34.337	Maylandia_zebra
ENSXETG00000005590	-	71	32.877	ENSMZEG00005000211	-	54	32.877	Maylandia_zebra
ENSXETG00000005590	-	74	30.263	ENSMZEG00005025871	-	54	30.263	Maylandia_zebra
ENSXETG00000005590	-	74	30.263	ENSMZEG00005025869	-	54	30.263	Maylandia_zebra
ENSXETG00000005590	-	100	34.106	ENSMICG00000031267	ZCCHC3	58	38.627	Microcebus_murinus
ENSXETG00000005590	-	100	35.216	ENSMOCG00000002870	Zcchc3	75	34.884	Microtus_ochrogaster
ENSXETG00000005590	-	100	34.884	MGP_CAROLIEiJ_G0024454	Zcchc3	75	34.551	Mus_caroli
ENSXETG00000005590	-	100	34.884	ENSMUSG00000074682	Zcchc3	75	34.551	Mus_musculus
ENSXETG00000005590	-	100	35.216	MGP_PahariEiJ_G0025898	Zcchc3	75	34.884	Mus_pahari
ENSXETG00000005590	-	100	34.884	MGP_SPRETEiJ_G0025375	Zcchc3	75	34.551	Mus_spretus
ENSXETG00000005590	-	100	35.216	ENSNGAG00000006074	Zcchc3	65	38.492	Nannospalax_galili
ENSXETG00000005590	-	61	30.319	ENSNBRG00000024091	-	53	30.319	Neolamprologus_brichardi
ENSXETG00000005590	-	100	33.333	ENSNLEG00000009533	ZCCHC3	73	33.887	Nomascus_leucogenys
ENSXETG00000005590	-	74	39.189	ENSOPRG00000005081	ZCCHC3	61	37.052	Ochotona_princeps
ENSXETG00000005590	-	74	39.189	ENSODEG00000010730	ZCCHC3	55	39.189	Octodon_degus
ENSXETG00000005590	-	74	39.640	ENSOCUG00000017024	ZCCHC3	59	39.640	Oryctolagus_cuniculus
ENSXETG00000005590	-	74	39.189	ENSOGAG00000025208	ZCCHC3	57	38.362	Otolemur_garnettii
ENSXETG00000005590	-	74	39.640	ENSOARG00000019161	ZCCHC3	84	38.115	Ovis_aries
ENSXETG00000005590	-	76	38.865	ENSPPAG00000010453	-	90	37.959	Pan_paniscus
ENSXETG00000005590	-	100	34.641	ENSPPRG00000014724	ZCCHC3	64	37.743	Panthera_pardus
ENSXETG00000005590	-	76	36.681	ENSPTIG00000009393	ZCCHC3	93	36.681	Panthera_tigris_altaica
ENSXETG00000005590	-	100	34.839	ENSPTRG00000047645	ZCCHC3	63	37.891	Pan_troglodytes
ENSXETG00000005590	-	100	34.000	ENSPANG00000013450	ZCCHC3	74	34.551	Papio_anubis
ENSXETG00000005590	-	100	33.333	ENSPEMG00000009059	Zcchc3	75	33.333	Peromyscus_maniculatus_bairdii
ENSXETG00000005590	-	65	37.436	ENSPCAG00000008034	ZCCHC3	64	35.652	Procavia_capensis
ENSXETG00000005590	-	100	34.106	ENSPCOG00000012289	ZCCHC3	55	39.640	Propithecus_coquereli
ENSXETG00000005590	-	100	34.967	ENSPVAG00000000182	ZCCHC3	64	37.743	Pteropus_vampyrus
ENSXETG00000005590	-	74	31.579	ENSPNYG00000003800	-	55	31.140	Pundamilia_nyererei
ENSXETG00000005590	-	100	33.333	ENSRNOG00000007520	Zcchc3	75	33.333	Rattus_norvegicus
ENSXETG00000005590	-	100	34.000	ENSRBIG00000029757	ZCCHC3	74	34.551	Rhinopithecus_bieti
ENSXETG00000005590	-	100	34.000	ENSRROG00000005210	ZCCHC3	74	34.551	Rhinopithecus_roxellana
ENSXETG00000005590	-	100	33.333	ENSSSCG00000007211	ZCCHC3	75	33.333	Sus_scrofa
ENSXETG00000005590	-	100	34.437	ENSTTRG00000008511	ZCCHC3	74	34.437	Tursiops_truncatus
ENSXETG00000005590	-	100	34.839	ENSUAMG00000023407	ZCCHC3	75	34.314	Ursus_americanus
ENSXETG00000005590	-	72	40.278	ENSVPAG00000011267	-	88	40.278	Vicugna_pacos