EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000005944 (Gene tree)
Gene ID: -
Gene Symbol: rab7b
Alias: -
Full Name: Xenopus tropicalis RAB7B%2C member RAS oncogene family (rab7b)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 12088 bases
Position: chrGL173598.1:101982-114069
Accession: NM_001102911
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000013071	MMR_HSR1	PF01926.23	8.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000013071	-	1234	-	ENSXETP00000013071	201 (aa)	XP_012820531	F7EDY3

Gene Model

Click here to download ENSXETG00000005944's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000005944's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000005944	rab7b	79	33.540	ENSXETG00000008055	rab3b	80	33.540
ENSXETG00000005944	rab7b	94	32.020	ENSXETG00000025484	rab11b.1	90	32.020
ENSXETG00000005944	rab7b	75	30.323	ENSXETG00000007760	rap2b	88	30.357
ENSXETG00000005944	rab7b	96	41.451	ENSXETG00000014257	mgc75872	97	41.451
ENSXETG00000005944	rab7b	96	33.673	ENSXETG00000011370	rab35	96	33.673
ENSXETG00000005944	rab7b	99	32.353	ENSXETG00000002305	rab5a	93	32.353
ENSXETG00000005944	rab7b	89	37.222	ENSXETG00000023200	rab6a	93	37.222
ENSXETG00000005944	rab7b	80	32.515	ENSXETG00000032443	RAB39B	76	32.515
ENSXETG00000005944	rab7b	92	30.319	ENSXETG00000020622	rab39a	89	30.319
ENSXETG00000005944	rab7b	82	31.737	ENSXETG00000022517	rerg	81	31.737
ENSXETG00000005944	rab7b	86	31.792	ENSXETG00000002201	rab15	80	31.792
ENSXETG00000005944	rab7b	99	42.000	ENSXETG00000018133	rab9b	99	42.000
ENSXETG00000005944	rab7b	73	30.323	ENSXETG00000030983	RASL11A	60	30.323
ENSXETG00000005944	rab7b	85	34.682	ENSXETG00000020404	rab25	79	34.682
ENSXETG00000005944	rab7b	96	32.075	ENSXETG00000017184	rab2b	97	32.075
ENSXETG00000005944	rab7b	68	36.957	ENSXETG00000020729	rab13	94	32.468
ENSXETG00000005944	rab7b	78	34.177	ENSXETG00000021890	rab11b.2	70	34.177
ENSXETG00000005944	rab7b	80	36.646	ENSXETG00000013633	rab30	78	36.646
ENSXETG00000005944	rab7b	96	35.323	ENSXETG00000014011	rab1a	96	35.323
ENSXETG00000005944	rab7b	80	36.025	ENSXETG00000030938	rab41	75	36.025
ENSXETG00000005944	rab7b	79	33.750	ENSXETG00000006639	rab11a	73	33.750
ENSXETG00000005944	rab7b	76	32.026	ENSXETG00000004449	rab23	69	31.548
ENSXETG00000005944	rab7b	74	34.416	ENSXETG00000005505	MRAS	80	34.302
ENSXETG00000005944	rab7b	82	37.576	ENSXETG00000026943	rab35	96	33.838
ENSXETG00000005944	rab7b	96	41.837	ENSXETG00000013345	rab9a	97	41.837
ENSXETG00000005944	rab7b	83	33.136	ENSXETG00000016920	rab33b	73	33.136
ENSXETG00000005944	rab7b	80	34.545	ENSXETG00000018183	rab33a	76	34.545
ENSXETG00000005944	rab7b	78	34.810	ENSXETG00000004289	rab12	50	34.810
ENSXETG00000005944	rab7b	88	49.162	ENSXETG00000016176	rab7a	86	49.162
ENSXETG00000005944	rab7b	79	32.075	ENSXETG00000031363	-	71	32.075
ENSXETG00000005944	rab7b	82	37.805	ENSXETG00000004556	rab18	79	37.805

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000005944	rab7b	68	67.883	ENSGAGG00000020394	RAB7B	87	67.883	Gopherus_agassizii
ENSXETG00000005944	rab7b	99	61.500	ENSMODG00000001915	RAB7B	100	61.500	Monodelphis_domestica
ENSXETG00000005944	rab7b	100	64.677	ENSPSIG00000003388	RAB7B	100	64.677	Pelodiscus_sinensis