EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000006029 (Gene tree)
Gene ID: -
Gene Symbol: lrrc47
Alias: -
Full Name: Xenopus tropicalis leucine rich repeat containing 47 (lrrc47)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 13049 bases
Position: chrGL172929.1:258742-271790
Accession: NM_001127162
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000013278	B3_4	PF03483.17	3.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000013278	-	2007	-	ENSXETP00000013278	572 (aa)	-	F7ELV8

Gene Model

Click here to download ENSXETG00000006029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000006029's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000006029	lrrc47	99	61.235	ENSG00000130764	LRRC47	99	61.235	Homo_sapiens
ENSXETG00000006029	lrrc47	98	57.244	ENSAPOG00000019553	lrrc47	99	57.754	Acanthochromis_polyacanthus
ENSXETG00000006029	lrrc47	80	57.019	ENSAMEG00000009152	LRRC47	100	57.451	Ailuropoda_melanoleuca
ENSXETG00000006029	lrrc47	67	64.948	ENSAPLG00000003167	LRRC47	100	66.324	Anas_platyrhynchos
ENSXETG00000006029	lrrc47	66	65.526	ENSACAG00000008267	LRRC47	99	64.550	Anolis_carolinensis
ENSXETG00000006029	lrrc47	99	59.520	ENSANAG00000025576	LRRC47	99	59.520	Aotus_nancymaae
ENSXETG00000006029	lrrc47	99	57.931	ENSBTAG00000004738	LRRC47	99	58.419	Bos_taurus
ENSXETG00000006029	lrrc47	95	59.246	ENSCAFG00000019492	LRRC47	98	58.763	Canis_familiaris
ENSXETG00000006029	lrrc47	99	59.177	ENSCAFG00020009667	LRRC47	100	59.177	Canis_lupus_dingo
ENSXETG00000006029	lrrc47	99	58.966	ENSCHIG00000022607	LRRC47	99	58.247	Capra_hircus
ENSXETG00000006029	lrrc47	95	59.785	ENSTSYG00000009326	LRRC47	97	59.930	Carlito_syrichta
ENSXETG00000006029	lrrc47	66	63.852	ENSCAPG00000016517	LRRC47	100	63.588	Cavia_aperea
ENSXETG00000006029	lrrc47	99	59.005	ENSCPOG00000014931	LRRC47	96	59.348	Cavia_porcellus
ENSXETG00000006029	lrrc47	99	59.863	ENSCCAG00000024895	LRRC47	99	59.863	Cebus_capucinus
ENSXETG00000006029	lrrc47	99	60.892	ENSCATG00000029337	LRRC47	99	61.235	Cercocebus_atys
ENSXETG00000006029	lrrc47	99	60.549	ENSCLAG00000006093	LRRC47	99	60.377	Chinchilla_lanigera
ENSXETG00000006029	lrrc47	99	61.235	ENSCSAG00000000727	LRRC47	99	61.578	Chlorocebus_sabaeus
ENSXETG00000006029	lrrc47	99	60.201	ENSCPBG00000019404	LRRC47	99	60.000	Chrysemys_picta_bellii
ENSXETG00000006029	lrrc47	79	61.472	ENSCANG00000030701	LRRC47	96	61.905	Colobus_angolensis_palliatus
ENSXETG00000006029	lrrc47	98	58.925	ENSCGRG00001015159	Lrrc47	90	58.591	Cricetulus_griseus_chok1gshd
ENSXETG00000006029	lrrc47	66	62.730	ENSCGRG00000017336	Lrrc47	100	62.992	Cricetulus_griseus_crigri
ENSXETG00000006029	lrrc47	99	56.766	ENSCSEG00000006217	lrrc47	96	57.118	Cynoglossus_semilaevis
ENSXETG00000006029	lrrc47	66	61.640	ENSDORG00000016594	Lrrc47	99	62.434	Dipodomys_ordii
ENSXETG00000006029	lrrc47	99	59.725	ENSEASG00005021788	LRRC47	99	59.725	Equus_asinus_asinus
ENSXETG00000006029	lrrc47	98	59.408	ENSECAG00000022472	LRRC47	90	59.380	Equus_caballus
ENSXETG00000006029	lrrc47	97	56.506	ENSELUG00000017544	lrrc47	95	57.066	Esox_lucius
ENSXETG00000006029	lrrc47	95	57.527	ENSFCAG00000011632	LRRC47	99	57.549	Felis_catus
ENSXETG00000006029	lrrc47	71	64.444	ENSFALG00000009631	LRRC47	99	63.039	Ficedula_albicollis
ENSXETG00000006029	lrrc47	96	57.246	ENSGMOG00000015674	lrrc47	97	56.884	Gadus_morhua
ENSXETG00000006029	lrrc47	99	57.021	ENSGALG00000050995	LRRC47	100	57.192	Gallus_gallus
ENSXETG00000006029	lrrc47	96	56.806	ENSGACG00000005550	lrrc47	96	56.624	Gasterosteus_aculeatus
ENSXETG00000006029	lrrc47	99	60.368	ENSGAGG00000022584	LRRC47	99	60.368	Gopherus_agassizii
ENSXETG00000006029	lrrc47	99	61.235	ENSGGOG00000015571	LRRC47	99	61.235	Gorilla_gorilla
ENSXETG00000006029	lrrc47	99	58.763	ENSHGLG00000018278	LRRC47	96	58.763	Heterocephalus_glaber_female
ENSXETG00000006029	lrrc47	81	62.562	ENSHGLG00100008507	LRRC47	100	62.562	Heterocephalus_glaber_male
ENSXETG00000006029	lrrc47	97	56.341	ENSHCOG00000006348	lrrc47	95	55.797	Hippocampus_comes
ENSXETG00000006029	lrrc47	99	59.589	ENSSTOG00000027559	LRRC47	99	59.589	Ictidomys_tridecemlineatus
ENSXETG00000006029	lrrc47	98	60.104	ENSJJAG00000017474	Lrrc47	97	59.354	Jaculus_jaculus
ENSXETG00000006029	lrrc47	98	57.576	ENSKMAG00000003414	lrrc47	99	57.041	Kryptolebias_marmoratus
ENSXETG00000006029	lrrc47	99	60.274	ENSLAFG00000011657	LRRC47	99	60.684	Loxodonta_africana
ENSXETG00000006029	lrrc47	99	45.946	ENSMFAG00000045730	LRRC47	89	59.664	Macaca_fascicularis
ENSXETG00000006029	lrrc47	99	60.757	ENSMNEG00000042488	LRRC47	99	61.235	Macaca_nemestrina
ENSXETG00000006029	lrrc47	77	61.556	ENSMLEG00000043735	LRRC47	92	60.385	Mandrillus_leucophaeus
ENSXETG00000006029	lrrc47	98	59.233	ENSMAUG00000021337	Lrrc47	97	59.408	Mesocricetus_auratus
ENSXETG00000006029	lrrc47	99	58.591	ENSMICG00000026816	LRRC47	99	58.834	Microcebus_murinus
ENSXETG00000006029	lrrc47	99	59.483	ENSMOCG00000021279	Lrrc47	99	59.828	Microtus_ochrogaster
ENSXETG00000006029	lrrc47	98	56.863	ENSMMOG00000017007	lrrc47	99	56.863	Mola_mola
ENSXETG00000006029	lrrc47	98	59.686	ENSMODG00000006554	LRRC47	98	57.592	Monodelphis_domestica
ENSXETG00000006029	lrrc47	99	59.758	MGP_CAROLIEiJ_G0026864	Lrrc47	99	59.828	Mus_caroli
ENSXETG00000006029	lrrc47	99	60.104	ENSMUSG00000029028	Lrrc47	99	60.172	Mus_musculus
ENSXETG00000006029	lrrc47	98	58.957	MGP_PahariEiJ_G0029212	Lrrc47	100	59.316	Mus_pahari
ENSXETG00000006029	lrrc47	99	59.931	MGP_SPRETEiJ_G0027857	Lrrc47	99	60.000	Mus_spretus
ENSXETG00000006029	lrrc47	67	62.663	ENSMPUG00000007321	LRRC47	75	62.663	Mustela_putorius_furo
ENSXETG00000006029	lrrc47	98	57.840	ENSNGAG00000022153	Lrrc47	99	58.904	Nannospalax_galili
ENSXETG00000006029	lrrc47	99	59.208	ENSNLEG00000008131	LRRC47	99	59.208	Nomascus_leucogenys
ENSXETG00000006029	lrrc47	88	60.241	ENSODEG00000010882	LRRC47	95	60.241	Octodon_degus
ENSXETG00000006029	lrrc47	95	57.299	ENSORLG00000002532	lrrc47	99	57.643	Oryzias_latipes
ENSXETG00000006029	lrrc47	98	57.420	ENSORLG00020019601	lrrc47	99	57.754	Oryzias_latipes_hni
ENSXETG00000006029	lrrc47	97	58.169	ENSORLG00015014040	lrrc47	97	58.514	Oryzias_latipes_hsok
ENSXETG00000006029	lrrc47	97	57.609	ENSOMEG00000008989	lrrc47	99	56.863	Oryzias_melastigma
ENSXETG00000006029	lrrc47	99	58.763	ENSOGAG00000001553	LRRC47	99	59.177	Otolemur_garnettii
ENSXETG00000006029	lrrc47	99	57.069	ENSOARG00000015290	LRRC47	99	57.045	Ovis_aries
ENSXETG00000006029	lrrc47	99	63.326	ENSPPAG00000036370	-	99	63.326	Pan_paniscus
ENSXETG00000006029	lrrc47	98	57.639	ENSPPRG00000005261	LRRC47	100	57.653	Panthera_pardus
ENSXETG00000006029	lrrc47	99	61.235	ENSPTRG00000000068	LRRC47	99	61.235	Pan_troglodytes
ENSXETG00000006029	lrrc47	99	61.063	ENSPANG00000012437	LRRC47	99	61.407	Papio_anubis
ENSXETG00000006029	lrrc47	66	70.604	ENSPSIG00000004196	LRRC47	100	70.341	Pelodiscus_sinensis
ENSXETG00000006029	lrrc47	66	64.286	ENSPEMG00000021068	Lrrc47	100	64.550	Peromyscus_maniculatus_bairdii
ENSXETG00000006029	lrrc47	98	62.653	ENSPCIG00000003638	LRRC47	99	62.371	Phascolarctos_cinereus
ENSXETG00000006029	lrrc47	93	59.887	ENSPFOG00000000992	lrrc47	93	59.887	Poecilia_formosa
ENSXETG00000006029	lrrc47	98	60.071	ENSPLAG00000008077	lrrc47	99	60.071	Poecilia_latipinna
ENSXETG00000006029	lrrc47	98	59.537	ENSPMEG00000007367	lrrc47	99	59.964	Poecilia_mexicana
ENSXETG00000006029	lrrc47	99	61.235	ENSPPYG00000001960	LRRC47	99	61.235	Pongo_abelii
ENSXETG00000006029	lrrc47	99	57.931	ENSPCOG00000019161	LRRC47	99	58.834	Propithecus_coquereli
ENSXETG00000006029	lrrc47	99	58.763	ENSPVAG00000009839	LRRC47	99	59.107	Pteropus_vampyrus
ENSXETG00000006029	lrrc47	99	57.766	ENSPNAG00000017982	lrrc47	100	58.115	Pygocentrus_nattereri
ENSXETG00000006029	lrrc47	99	59.278	ENSRNOG00000024796	Lrrc47	99	60.137	Rattus_norvegicus
ENSXETG00000006029	lrrc47	99	61.407	ENSRBIG00000019437	LRRC47	99	61.750	Rhinopithecus_bieti
ENSXETG00000006029	lrrc47	99	61.407	ENSRROG00000043182	LRRC47	99	61.750	Rhinopithecus_roxellana
ENSXETG00000006029	lrrc47	79	61.758	ENSSBOG00000026334	LRRC47	92	61.758	Saimiri_boliviensis_boliviensis
ENSXETG00000006029	lrrc47	98	53.276	ENSSHAG00000007360	LRRC47	99	53.311	Sarcophilus_harrisii
ENSXETG00000006029	lrrc47	98	58.007	ENSSMAG00000009344	lrrc47	99	57.576	Scophthalmus_maximus
ENSXETG00000006029	lrrc47	97	58.409	ENSSDUG00000014618	lrrc47	97	58.333	Seriola_dumerili
ENSXETG00000006029	lrrc47	97	59.132	ENSSLDG00000018908	lrrc47	97	58.514	Seriola_lalandi_dorsalis
ENSXETG00000006029	lrrc47	99	59.386	ENSSPUG00000010277	LRRC47	99	59.492	Sphenodon_punctatus
ENSXETG00000006029	lrrc47	98	58.897	ENSSPAG00000005188	lrrc47	99	58.467	Stegastes_partitus
ENSXETG00000006029	lrrc47	99	59.278	ENSSSCG00000039516	LRRC47	99	59.278	Sus_scrofa
ENSXETG00000006029	lrrc47	71	63.210	ENSTGUG00000002737	LRRC47	98	63.951	Taeniopygia_guttata
ENSXETG00000006029	lrrc47	97	56.884	ENSTRUG00000017696	lrrc47	97	56.341	Takifugu_rubripes
ENSXETG00000006029	lrrc47	98	55.971	ENSTNIG00000010923	lrrc47	98	55.971	Tetraodon_nigroviridis
ENSXETG00000006029	lrrc47	99	57.633	ENSTTRG00000011751	LRRC47	99	57.633	Tursiops_truncatus
ENSXETG00000006029	lrrc47	87	60.078	ENSUAMG00000012080	LRRC47	96	60.078	Ursus_americanus
ENSXETG00000006029	lrrc47	66	63.421	ENSUMAG00000010781	LRRC47	80	63.421	Ursus_maritimus
ENSXETG00000006029	lrrc47	99	55.499	ENSVVUG00000027118	LRRC47	99	55.499	Vulpes_vulpes
ENSXETG00000006029	lrrc47	98	58.792	ENSXCOG00000002813	lrrc47	98	58.259	Xiphophorus_couchianus
ENSXETG00000006029	lrrc47	98	59.358	ENSXMAG00000019386	lrrc47	99	59.358	Xiphophorus_maculatus