EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000006254 (Gene tree)
Gene ID: -
Gene Symbol: setx
Alias: -
Full Name: senataxin
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 39788 bases
Position: chrGL172827.1:547822-587609
Accession: XB-GENE-966858
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000057247	SEN1_N	PF12726.7	1.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000057247	-	7221	-	ENSXETP00000057247	2359 (aa)	-	F6ZZC8

Gene Model

Click here to download ENSXETG00000006254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000006254's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000006254	setx	95	63.411	ENSG00000107290	SETX	79	63.123	Homo_sapiens
ENSXETG00000006254	setx	83	41.452	ENSAMXG00000014406	-	84	41.452	Astyanax_mexicanus
ENSXETG00000006254	setx	89	63.724	ENSCJAG00000018245	SETX	79	65.066	Callithrix_jacchus
ENSXETG00000006254	setx	88	63.861	ENSCPOG00000001492	SETX	79	63.861	Cavia_porcellus
ENSXETG00000006254	setx	85	64.552	ENSCLAG00000012582	SETX	79	64.552	Chinchilla_lanigera
ENSXETG00000006254	setx	65	66.452	ENSETEG00000008111	-	60	66.452	Echinops_telfairi
ENSXETG00000006254	setx	87	64.238	ENSECAG00000012019	SETX	85	64.393	Equus_caballus
ENSXETG00000006254	setx	67	43.067	ENSELUG00000022536	-	81	42.928	Esox_lucius
ENSXETG00000006254	setx	88	64.404	ENSFCAG00000007102	SETX	79	64.404	Felis_catus
ENSXETG00000006254	setx	90	64.229	ENSFALG00000001464	SETX	86	66.444	Ficedula_albicollis
ENSXETG00000006254	setx	95	59.768	ENSGGOG00000027664	SETX	79	59.468	Gorilla_gorilla
ENSXETG00000006254	setx	83	41.318	ENSIPUG00000006685	setx	85	41.318	Ictalurus_punctatus
ENSXETG00000006254	setx	66	37.237	ENSLOCG00000004264	SETX	66	37.200	Lepisosteus_oculatus
ENSXETG00000006254	setx	86	63.636	ENSMOCG00000000848	Setx	80	63.908	Microtus_ochrogaster
ENSXETG00000006254	setx	84	62.420	MGP_PahariEiJ_G0024821	Setx	78	62.420	Mus_pahari
ENSXETG00000006254	setx	95	61.960	ENSNLEG00000012839	SETX	82	61.960	Nomascus_leucogenys
ENSXETG00000006254	setx	83	58.871	ENSOCUG00000005616	SETX	71	65.291	Oryctolagus_cuniculus
ENSXETG00000006254	setx	89	64.052	ENSOGAG00000013387	SETX	80	64.052	Otolemur_garnettii
ENSXETG00000006254	setx	95	63.742	ENSPPAG00000004108	SETX	79	63.455	Pan_paniscus
ENSXETG00000006254	setx	88	64.238	ENSPPRG00000012867	SETX	79	64.238	Panthera_pardus
ENSXETG00000006254	setx	88	64.238	ENSPTIG00000021101	SETX	79	64.238	Panthera_tigris_altaica
ENSXETG00000006254	setx	95	63.576	ENSPTRG00000021495	SETX	79	63.289	Pan_troglodytes
ENSXETG00000006254	setx	100	40.585	ENSPKIG00000025162	SETX	81	48.510	Paramormyrops_kingsleyae
ENSXETG00000006254	setx	90	65.116	ENSSPUG00000016332	SETX	83	65.116	Sphenodon_punctatus
ENSXETG00000006254	setx	89	64.570	ENSSSCG00000005724	SETX	79	66.224	Sus_scrofa
ENSXETG00000006254	setx	90	65.385	ENSTGUG00000005117	SETX	86	65.116	Taeniopygia_guttata