EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000006263 (Gene tree)
Gene ID: -
Gene Symbol: gfi1b
Alias: -
Full Name: growth factor independent 1B transcription repressor
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 7967 bases
Position: chrGL172827.1:201157-209123
Accession: XB-GENE-944426
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000013728	zf-C2H2	PF00096.26	5.4e-30	1	5
ENSXETP00000013728	zf-C2H2	PF00096.26	5.4e-30	2	5
ENSXETP00000013728	zf-C2H2	PF00096.26	5.4e-30	3	5
ENSXETP00000013728	zf-C2H2	PF00096.26	5.4e-30	4	5
ENSXETP00000013728	zf-C2H2	PF00096.26	5.4e-30	5	5
ENSXETP00000013728	zf-met	PF12874.7	2.6e-08	1	2
ENSXETP00000013728	zf-met	PF12874.7	2.6e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000013728	-	1005	-	ENSXETP00000013728	334 (aa)	-	F7E2M5

Gene Model

Click here to download ENSXETG00000006263's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000006263's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000006263	gfi1b	51	38.095	ENSXETG00000001980	znf408	76	38.095
ENSXETG00000006263	gfi1b	55	42.262	ENSXETG00000002690	-	54	42.262
ENSXETG00000006263	gfi1b	64	43.750	ENSXETG00000027149	-	100	43.125
ENSXETG00000006263	gfi1b	56	41.176	ENSXETG00000013744	znf319	87	40.876
ENSXETG00000006263	gfi1b	58	42.384	ENSXETG00000034213	-	99	41.875
ENSXETG00000006263	gfi1b	56	41.875	ENSXETG00000026673	-	92	41.875
ENSXETG00000006263	gfi1b	58	43.860	ENSXETG00000030967	-	91	43.860
ENSXETG00000006263	gfi1b	57	39.286	ENSXETG00000027536	znf574	58	39.286
ENSXETG00000006263	gfi1b	57	36.076	ENSXETG00000002101	prdm5	77	36.076
ENSXETG00000006263	gfi1b	63	45.963	ENSXETG00000006575	znf420	83	45.062
ENSXETG00000006263	gfi1b	58	38.095	ENSXETG00000002339	znf423	56	38.095
ENSXETG00000006263	gfi1b	57	41.818	ENSXETG00000010512	-	99	41.818
ENSXETG00000006263	gfi1b	51	37.500	ENSXETG00000027366	snai1	53	38.686
ENSXETG00000006263	gfi1b	72	45.783	ENSXETG00000023597	-	100	45.783
ENSXETG00000006263	gfi1b	50	48.062	ENSXETG00000031460	-	81	48.062
ENSXETG00000006263	gfi1b	71	39.706	ENSXETG00000031310	-	76	39.706
ENSXETG00000006263	gfi1b	54	45.783	ENSXETG00000008801	znf628	96	44.720
ENSXETG00000006263	gfi1b	64	41.228	ENSXETG00000033098	ZNF366	51	41.228
ENSXETG00000006263	gfi1b	64	45.562	ENSXETG00000016781	-	99	47.059
ENSXETG00000006263	gfi1b	60	42.500	ENSXETG00000025282	-	99	42.500
ENSXETG00000006263	gfi1b	52	44.348	ENSXETG00000030249	-	52	44.348
ENSXETG00000006263	gfi1b	54	44.643	ENSXETG00000016062	znf184	94	44.643
ENSXETG00000006263	gfi1b	57	36.646	ENSXETG00000001910	znf646	99	38.650
ENSXETG00000006263	gfi1b	51	46.951	ENSXETG00000032038	-	92	46.951
ENSXETG00000006263	gfi1b	50	40.845	ENSXETG00000027484	znf432	62	40.845
ENSXETG00000006263	gfi1b	81	44.444	ENSXETG00000030307	-	100	44.444
ENSXETG00000006263	gfi1b	64	43.452	ENSXETG00000013882	-	99	43.452
ENSXETG00000006263	gfi1b	54	41.727	ENSXETG00000033508	-	71	41.727
ENSXETG00000006263	gfi1b	56	40.000	ENSXETG00000016091	e4f1	60	36.757
ENSXETG00000006263	gfi1b	60	44.172	ENSXETG00000023643	znf484	100	44.720
ENSXETG00000006263	gfi1b	58	38.095	ENSXETG00000015125	-	96	38.323
ENSXETG00000006263	gfi1b	62	44.512	ENSXETG00000031192	-	99	44.512
ENSXETG00000006263	gfi1b	58	46.875	ENSXETG00000017175	-	100	46.875
ENSXETG00000006263	gfi1b	63	35.593	ENSXETG00000024006	snai2	73	35.593
ENSXETG00000006263	gfi1b	63	50.909	ENSXETG00000012506	znf91	99	50.909
ENSXETG00000006263	gfi1b	50	44.720	ENSXETG00000024118	-	100	44.720
ENSXETG00000006263	gfi1b	52	43.353	ENSXETG00000006490	znf350	89	43.353
ENSXETG00000006263	gfi1b	60	37.500	ENSXETG00000001911	znf668	95	39.053
ENSXETG00000006263	gfi1b	54	42.857	ENSXETG00000002717	-	99	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000006263	gfi1b	100	57.353	ENSAPOG00000001296	gfi1b	100	57.313	Acanthochromis_polyacanthus
ENSXETG00000006263	gfi1b	67	75.000	ENSACIG00000002190	gfi1b	99	56.587	Amphilophus_citrinellus
ENSXETG00000006263	gfi1b	100	57.227	ENSAOCG00000021187	gfi1b	100	55.882	Amphiprion_ocellaris
ENSXETG00000006263	gfi1b	100	57.910	ENSAPEG00000016196	gfi1b	100	56.176	Amphiprion_percula
ENSXETG00000006263	gfi1b	100	58.065	ENSATEG00000002534	gfi1b	100	55.814	Anabas_testudineus
ENSXETG00000006263	gfi1b	100	59.770	ENSAPLG00000003373	GFI1B	100	59.483	Anas_platyrhynchos
ENSXETG00000006263	gfi1b	99	59.581	ENSACLG00000027053	gfi1b	99	57.185	Astatotilapia_calliptera
ENSXETG00000006263	gfi1b	100	58.480	ENSAMXG00000037544	GFI1B	100	57.471	Astyanax_mexicanus
ENSXETG00000006263	gfi1b	100	61.988	ENSCAPG00000010404	GFI1B	100	61.850	Cavia_aperea
ENSXETG00000006263	gfi1b	100	61.272	ENSCPBG00000021186	GFI1B	100	60.623	Chrysemys_picta_bellii
ENSXETG00000006263	gfi1b	100	55.090	ENSCSEG00000001315	gfi1b	100	54.277	Cynoglossus_semilaevis
ENSXETG00000006263	gfi1b	100	56.250	ENSCVAG00000017168	gfi1b	100	55.952	Cyprinodon_variegatus
ENSXETG00000006263	gfi1b	100	57.803	ENSDARG00000079947	gfi1b	96	72.727	Danio_rerio
ENSXETG00000006263	gfi1b	63	54.245	ENSEEUG00000012609	-	93	54.245	Erinaceus_europaeus
ENSXETG00000006263	gfi1b	100	56.484	ENSELUG00000016933	gfi1b	100	56.484	Esox_lucius
ENSXETG00000006263	gfi1b	100	55.200	ENSFALG00000001479	GFI1B	100	55.200	Ficedula_albicollis
ENSXETG00000006263	gfi1b	100	57.059	ENSFHEG00000015138	gfi1b	100	56.637	Fundulus_heteroclitus
ENSXETG00000006263	gfi1b	69	71.861	ENSGMOG00000019123	gfi1b	86	71.861	Gadus_morhua
ENSXETG00000006263	gfi1b	100	59.026	ENSGALG00000003478	GFI1B	100	58.739	Gallus_gallus
ENSXETG00000006263	gfi1b	69	72.294	ENSGAFG00000003059	gfi1b	98	72.294	Gambusia_affinis
ENSXETG00000006263	gfi1b	100	54.144	ENSGACG00000018134	gfi1b	100	53.867	Gasterosteus_aculeatus
ENSXETG00000006263	gfi1b	100	62.874	ENSGAGG00000021327	GFI1B	100	61.318	Gopherus_agassizii
ENSXETG00000006263	gfi1b	99	59.581	ENSHBUG00000005451	gfi1b	99	57.185	Haplochromis_burtoni
ENSXETG00000006263	gfi1b	100	57.396	ENSHCOG00000013713	gfi1b	100	56.560	Hippocampus_comes
ENSXETG00000006263	gfi1b	100	57.022	ENSIPUG00000012769	gfi1b	100	58.480	Ictalurus_punctatus
ENSXETG00000006263	gfi1b	99	58.556	ENSJJAG00000016355	Gfi1b	100	57.527	Jaculus_jaculus
ENSXETG00000006263	gfi1b	100	56.765	ENSKMAG00000016047	gfi1b	100	55.882	Kryptolebias_marmoratus
ENSXETG00000006263	gfi1b	100	58.160	ENSLBEG00000020297	gfi1b	99	57.270	Labrus_bergylta
ENSXETG00000006263	gfi1b	100	61.310	ENSLACG00000012207	GFI1B	100	60.237	Latimeria_chalumnae
ENSXETG00000006263	gfi1b	100	60.411	ENSLOCG00000005750	gfi1b	100	58.824	Lepisosteus_oculatus
ENSXETG00000006263	gfi1b	100	61.628	ENSLAFG00000022367	GFI1B	100	61.696	Loxodonta_africana
ENSXETG00000006263	gfi1b	100	57.478	ENSMAMG00000003040	gfi1b	100	56.140	Mastacembelus_armatus
ENSXETG00000006263	gfi1b	99	59.581	ENSMZEG00005015594	gfi1b	99	57.185	Maylandia_zebra
ENSXETG00000006263	gfi1b	100	60.411	ENSMGAG00000006129	GFI1B	100	60.411	Meleagris_gallopavo
ENSXETG00000006263	gfi1b	100	57.910	ENSMMOG00000011764	gfi1b	100	57.522	Mola_mola
ENSXETG00000006263	gfi1b	100	57.065	ENSMODG00000012600	GFI1B	100	56.403	Monodelphis_domestica
ENSXETG00000006263	gfi1b	100	58.407	ENSMALG00000004034	gfi1b	100	57.522	Monopterus_albus
ENSXETG00000006263	gfi1b	99	64.565	ENSNGAG00000003333	Gfi1b	100	63.717	Nannospalax_galili
ENSXETG00000006263	gfi1b	53	65.672	ENSNBRG00000012376	-	99	65.672	Neolamprologus_brichardi
ENSXETG00000006263	gfi1b	99	57.391	ENSNBRG00000012391	gfi1b	99	56.647	Neolamprologus_brichardi
ENSXETG00000006263	gfi1b	99	58.407	ENSONIG00000013011	gfi1b	94	83.240	Oreochromis_niloticus
ENSXETG00000006263	gfi1b	100	62.170	ENSOANG00000014723	GFI1B	100	61.078	Ornithorhynchus_anatinus
ENSXETG00000006263	gfi1b	98	50.699	ENSORLG00000014390	GFI1B	96	49.141	Oryzias_latipes
ENSXETG00000006263	gfi1b	100	58.112	ENSORLG00020003719	GFI1B	100	56.509	Oryzias_latipes_hni
ENSXETG00000006263	gfi1b	100	57.522	ENSORLG00015017142	gfi1b	100	56.213	Oryzias_latipes_hsok
ENSXETG00000006263	gfi1b	100	57.485	ENSOMEG00000015149	GFI1B	100	56.548	Oryzias_melastigma
ENSXETG00000006263	gfi1b	100	61.095	ENSOGAG00000008879	GFI1B	100	61.561	Otolemur_garnettii
ENSXETG00000006263	gfi1b	100	55.866	ENSPKIG00000007643	gfi1b	100	57.434	Paramormyrops_kingsleyae
ENSXETG00000006263	gfi1b	100	62.139	ENSPSIG00000012112	GFI1B	100	61.429	Pelodiscus_sinensis
ENSXETG00000006263	gfi1b	99	54.360	ENSPMGG00000006021	gfi1b	99	57.059	Periophthalmus_magnuspinnatus
ENSXETG00000006263	gfi1b	100	55.914	ENSPCIG00000019724	GFI1B	100	55.435	Phascolarctos_cinereus
ENSXETG00000006263	gfi1b	100	55.398	ENSPFOG00000003460	gfi1b	100	55.682	Poecilia_formosa
ENSXETG00000006263	gfi1b	100	57.227	ENSPLAG00000021960	GFI1B	100	55.493	Poecilia_latipinna
ENSXETG00000006263	gfi1b	100	55.143	ENSPLAG00000017181	GFI1B	100	53.846	Poecilia_latipinna
ENSXETG00000006263	gfi1b	100	57.227	ENSPMEG00000001556	GFI1B	100	55.493	Poecilia_mexicana
ENSXETG00000006263	gfi1b	100	57.227	ENSPMEG00000019220	gfi1b	100	55.493	Poecilia_mexicana
ENSXETG00000006263	gfi1b	100	57.227	ENSPREG00000021718	gfi1b	100	56.380	Poecilia_reticulata
ENSXETG00000006263	gfi1b	99	59.760	ENSPNYG00000018422	gfi1b	73	72.574	Pundamilia_nyererei
ENSXETG00000006263	gfi1b	100	56.105	ENSPNAG00000021118	gfi1b	100	56.380	Pygocentrus_nattereri
ENSXETG00000006263	gfi1b	100	52.368	ENSSHAG00000006462	GFI1B	100	52.674	Sarcophilus_harrisii
ENSXETG00000006263	gfi1b	83	50.853	ENSSFOG00015011566	gfi1b	90	50.171	Scleropages_formosus
ENSXETG00000006263	gfi1b	100	57.612	ENSSMAG00000015181	gfi1b	99	56.418	Scophthalmus_maximus
ENSXETG00000006263	gfi1b	100	58.017	ENSSDUG00000011604	gfi1b	100	57.101	Seriola_dumerili
ENSXETG00000006263	gfi1b	100	58.309	ENSSLDG00000013823	gfi1b	100	57.396	Seriola_lalandi_dorsalis
ENSXETG00000006263	gfi1b	100	53.026	ENSSPUG00000016039	GFI1B	100	53.561	Sphenodon_punctatus
ENSXETG00000006263	gfi1b	100	56.932	ENSSPAG00000022914	gfi1b	100	56.886	Stegastes_partitus
ENSXETG00000006263	gfi1b	60	48.299	ENSTGUG00000015953	-	60	56.897	Taeniopygia_guttata
ENSXETG00000006263	gfi1b	51	95.614	ENSTGUG00000005282	-	100	95.614	Taeniopygia_guttata
ENSXETG00000006263	gfi1b	100	57.227	ENSTRUG00000004525	gfi1b	100	56.932	Takifugu_rubripes
ENSXETG00000006263	gfi1b	100	58.480	ENSTNIG00000003834	gfi1b	100	58.065	Tetraodon_nigroviridis
ENSXETG00000006263	gfi1b	100	46.429	ENSTBEG00000014459	GFI1B	100	46.313	Tupaia_belangeri
ENSXETG00000006263	gfi1b	100	56.932	ENSXMAG00000027589	gfi1b	100	55.493	Xiphophorus_maculatus