EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000006346 (Gene tree)
Gene ID: -
Gene Symbol: polr2f
Alias: -
Full Name: Xenopus tropicalis polymerase (RNA) II subunit F (polr2f)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 4384 bases
Position: chrGL172724.1:499709-504092
Accession: NM_001006887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000013895	RNA_pol_Rpb6	PF01192.22	3.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000013895	-	603	-	ENSXETP00000013895	127 (aa)	-	Q6DDA6

Gene Model

Click here to download ENSXETG00000006346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000006346's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000006346	polr2f	100	94.488	ENSG00000100142	POLR2F	100	94.488	Homo_sapiens
ENSXETG00000006346	polr2f	100	90.551	ENSAPOG00000002902	polr2f	100	90.551	Acanthochromis_polyacanthus
ENSXETG00000006346	polr2f	100	93.701	ENSAMEG00000010331	POLR2F	100	93.701	Ailuropoda_melanoleuca
ENSXETG00000006346	polr2f	100	90.551	ENSACIG00000000923	polr2f	100	90.551	Amphilophus_citrinellus
ENSXETG00000006346	polr2f	100	91.339	ENSAOCG00000003182	polr2f	100	91.339	Amphiprion_ocellaris
ENSXETG00000006346	polr2f	100	91.339	ENSAPEG00000012999	polr2f	100	91.339	Amphiprion_percula
ENSXETG00000006346	polr2f	100	90.551	ENSATEG00000008929	polr2f	100	90.551	Anabas_testudineus
ENSXETG00000006346	polr2f	80	94.059	ENSAPLG00000015235	POLR2F	85	92.453	Anas_platyrhynchos
ENSXETG00000006346	polr2f	100	95.276	ENSACAG00000015288	POLR2F	100	95.276	Anolis_carolinensis
ENSXETG00000006346	polr2f	100	94.488	ENSANAG00000020840	POLR2F	100	94.488	Aotus_nancymaae
ENSXETG00000006346	polr2f	100	91.339	ENSACLG00000016129	polr2f	100	91.339	Astatotilapia_calliptera
ENSXETG00000006346	polr2f	100	91.339	ENSAMXG00000012812	polr2f	100	91.339	Astyanax_mexicanus
ENSXETG00000006346	polr2f	100	94.488	ENSBTAG00000004820	POLR2F	100	94.488	Bos_taurus
ENSXETG00000006346	polr2f	63	76.250	WBGene00007355	rpb-6	76	64.762	Caenorhabditis_elegans
ENSXETG00000006346	polr2f	100	94.488	ENSCJAG00000048241	POLR2F	100	94.488	Callithrix_jacchus
ENSXETG00000006346	polr2f	100	93.701	ENSCAFG00000001437	POLR2F	100	93.701	Canis_familiaris
ENSXETG00000006346	polr2f	83	93.396	ENSCHIG00000012907	POLR2F	83	93.396	Capra_hircus
ENSXETG00000006346	polr2f	100	93.701	ENSTSYG00000008187	POLR2F	100	93.701	Carlito_syrichta
ENSXETG00000006346	polr2f	83	93.396	ENSCAPG00000013419	POLR2F	83	93.396	Cavia_aperea
ENSXETG00000006346	polr2f	100	94.488	ENSCPOG00000034094	POLR2F	100	94.488	Cavia_porcellus
ENSXETG00000006346	polr2f	100	94.488	ENSCCAG00000036489	POLR2F	100	94.488	Cebus_capucinus
ENSXETG00000006346	polr2f	100	94.488	ENSCATG00000041014	POLR2F	100	94.488	Cercocebus_atys
ENSXETG00000006346	polr2f	100	94.488	ENSCLAG00000017167	POLR2F	100	94.488	Chinchilla_lanigera
ENSXETG00000006346	polr2f	100	94.488	ENSCSAG00000006862	POLR2F	100	94.488	Chlorocebus_sabaeus
ENSXETG00000006346	polr2f	83	94.340	ENSCPBG00000023030	POLR2F	54	94.340	Chrysemys_picta_bellii
ENSXETG00000006346	polr2f	81	75.000	ENSCING00000019359	-	73	75.000	Ciona_intestinalis
ENSXETG00000006346	polr2f	100	94.488	ENSCANG00000041884	POLR2F	100	94.488	Colobus_angolensis_palliatus
ENSXETG00000006346	polr2f	100	94.488	ENSCGRG00001023541	POLR2F	100	94.488	Cricetulus_griseus_chok1gshd
ENSXETG00000006346	polr2f	100	94.488	ENSCGRG00000011921	POLR2F	100	94.488	Cricetulus_griseus_crigri
ENSXETG00000006346	polr2f	83	92.453	ENSCSEG00000006848	polr2f	83	92.453	Cynoglossus_semilaevis
ENSXETG00000006346	polr2f	100	89.764	ENSCVAG00000010437	polr2f	100	89.764	Cyprinodon_variegatus
ENSXETG00000006346	polr2f	100	89.764	ENSDARG00000036625	polr2f	100	89.764	Danio_rerio
ENSXETG00000006346	polr2f	100	94.488	ENSDNOG00000005884	POLR2F	100	94.488	Dasypus_novemcinctus
ENSXETG00000006346	polr2f	100	94.488	ENSDORG00000024789	Polr2f	100	94.488	Dipodomys_ordii
ENSXETG00000006346	polr2f	78	70.588	FBgn0003275	RpII18	82	71.028	Drosophila_melanogaster
ENSXETG00000006346	polr2f	65	77.108	ENSEBUG00000002842	-	90	63.462	Eptatretus_burgeri
ENSXETG00000006346	polr2f	56	78.873	ENSEBUG00000008509	polr2f	73	78.873	Eptatretus_burgeri
ENSXETG00000006346	polr2f	66	90.476	ENSEASG00005018802	-	76	90.476	Equus_asinus_asinus
ENSXETG00000006346	polr2f	100	92.913	ENSEEUG00000011014	POLR2F	100	92.913	Erinaceus_europaeus
ENSXETG00000006346	polr2f	100	88.189	ENSELUG00000000319	polr2f	100	88.189	Esox_lucius
ENSXETG00000006346	polr2f	100	93.701	ENSFCAG00000002806	POLR2F	100	93.701	Felis_catus
ENSXETG00000006346	polr2f	100	94.488	ENSFDAG00000009926	POLR2F	100	94.488	Fukomys_damarensis
ENSXETG00000006346	polr2f	87	90.991	ENSFHEG00000005448	polr2f	84	90.566	Fundulus_heteroclitus
ENSXETG00000006346	polr2f	100	85.039	ENSGMOG00000009967	polr2f	100	85.039	Gadus_morhua
ENSXETG00000006346	polr2f	100	93.701	ENSGALG00000012291	POLR2F	100	93.701	Gallus_gallus
ENSXETG00000006346	polr2f	100	88.976	ENSGAFG00000017573	polr2f	100	88.976	Gambusia_affinis
ENSXETG00000006346	polr2f	100	86.614	ENSGACG00000007322	polr2f	100	86.614	Gasterosteus_aculeatus
ENSXETG00000006346	polr2f	100	95.276	ENSGAGG00000021757	POLR2F	100	95.276	Gopherus_agassizii
ENSXETG00000006346	polr2f	100	94.488	ENSGGOG00000005213	POLR2F	100	94.488	Gorilla_gorilla
ENSXETG00000006346	polr2f	100	91.339	ENSHBUG00000022089	polr2f	100	91.339	Haplochromis_burtoni
ENSXETG00000006346	polr2f	100	94.488	ENSHGLG00000018942	POLR2F	100	94.488	Heterocephalus_glaber_female
ENSXETG00000006346	polr2f	100	94.488	ENSHGLG00100012851	POLR2F	100	94.488	Heterocephalus_glaber_male
ENSXETG00000006346	polr2f	100	88.976	ENSHCOG00000006149	polr2f	100	88.976	Hippocampus_comes
ENSXETG00000006346	polr2f	76	94.845	ENSIPUG00000000814	polr2f	100	94.845	Ictalurus_punctatus
ENSXETG00000006346	polr2f	100	94.488	ENSSTOG00000025722	POLR2F	100	94.488	Ictidomys_tridecemlineatus
ENSXETG00000006346	polr2f	100	94.488	ENSJJAG00000008097	Polr2f	100	94.488	Jaculus_jaculus
ENSXETG00000006346	polr2f	100	92.126	ENSKMAG00000014230	polr2f	100	92.126	Kryptolebias_marmoratus
ENSXETG00000006346	polr2f	83	90.566	ENSLBEG00000008383	polr2f	88	90.566	Labrus_bergylta
ENSXETG00000006346	polr2f	100	96.850	ENSLACG00000003931	POLR2F	100	96.850	Latimeria_chalumnae
ENSXETG00000006346	polr2f	100	90.000	ENSLOCG00000011827	polr2f	100	90.000	Lepisosteus_oculatus
ENSXETG00000006346	polr2f	100	94.488	ENSLAFG00000012632	POLR2F	100	94.488	Loxodonta_africana
ENSXETG00000006346	polr2f	100	94.488	ENSMFAG00000033687	POLR2F	100	94.488	Macaca_fascicularis
ENSXETG00000006346	polr2f	83	93.396	ENSMMUG00000038231	POLR2F	87	93.396	Macaca_mulatta
ENSXETG00000006346	polr2f	100	94.488	ENSMNEG00000044365	POLR2F	100	94.488	Macaca_nemestrina
ENSXETG00000006346	polr2f	100	94.488	ENSMLEG00000033077	POLR2F	100	94.488	Mandrillus_leucophaeus
ENSXETG00000006346	polr2f	100	91.339	ENSMAMG00000008056	polr2f	100	91.339	Mastacembelus_armatus
ENSXETG00000006346	polr2f	100	91.339	ENSMZEG00005005705	polr2f	100	91.339	Maylandia_zebra
ENSXETG00000006346	polr2f	100	93.701	ENSMGAG00000012504	POLR2F	100	93.701	Meleagris_gallopavo
ENSXETG00000006346	polr2f	100	94.488	ENSMAUG00000018586	Polr2f	100	94.488	Mesocricetus_auratus
ENSXETG00000006346	polr2f	100	94.488	ENSMICG00000013128	POLR2F	100	94.488	Microcebus_murinus
ENSXETG00000006346	polr2f	100	94.488	ENSMOCG00000000237	Polr2f	100	94.488	Microtus_ochrogaster
ENSXETG00000006346	polr2f	100	91.339	ENSMMOG00000005106	polr2f	100	91.339	Mola_mola
ENSXETG00000006346	polr2f	100	93.701	ENSMODG00000019063	POLR2F	100	93.701	Monodelphis_domestica
ENSXETG00000006346	polr2f	100	90.551	ENSMALG00000001444	polr2f	100	90.551	Monopterus_albus
ENSXETG00000006346	polr2f	100	93.701	MGP_CAROLIEiJ_G0020006	Polr2f	100	93.701	Mus_caroli
ENSXETG00000006346	polr2f	100	93.701	ENSMUSG00000033020	Polr2f	100	93.701	Mus_musculus
ENSXETG00000006346	polr2f	100	93.701	MGP_PahariEiJ_G0020008	Polr2f	100	93.701	Mus_pahari
ENSXETG00000006346	polr2f	100	93.701	MGP_SPRETEiJ_G0020904	Polr2f	100	93.701	Mus_spretus
ENSXETG00000006346	polr2f	100	93.701	ENSMPUG00000012997	POLR2F	100	93.701	Mustela_putorius_furo
ENSXETG00000006346	polr2f	98	87.097	ENSMLUG00000029612	-	98	87.097	Myotis_lucifugus
ENSXETG00000006346	polr2f	100	92.248	ENSMLUG00000014315	-	100	92.248	Myotis_lucifugus
ENSXETG00000006346	polr2f	100	94.488	ENSNGAG00000020682	Polr2f	100	94.488	Nannospalax_galili
ENSXETG00000006346	polr2f	100	90.551	ENSNBRG00000002492	polr2f	100	90.551	Neolamprologus_brichardi
ENSXETG00000006346	polr2f	100	94.488	ENSNLEG00000014987	-	100	94.488	Nomascus_leucogenys
ENSXETG00000006346	polr2f	100	94.488	ENSODEG00000014123	POLR2F	100	94.488	Octodon_degus
ENSXETG00000006346	polr2f	100	90.551	ENSONIG00000008394	polr2f	100	90.551	Oreochromis_niloticus
ENSXETG00000006346	polr2f	100	95.276	ENSOANG00000014684	POLR2F	100	95.276	Ornithorhynchus_anatinus
ENSXETG00000006346	polr2f	100	94.488	ENSOCUG00000012064	POLR2F	100	94.488	Oryctolagus_cuniculus
ENSXETG00000006346	polr2f	100	88.976	ENSORLG00000014580	polr2f	100	88.976	Oryzias_latipes
ENSXETG00000006346	polr2f	100	89.764	ENSORLG00020006910	polr2f	100	89.764	Oryzias_latipes_hni
ENSXETG00000006346	polr2f	94	84.167	ENSORLG00015015332	polr2f	77	87.719	Oryzias_latipes_hsok
ENSXETG00000006346	polr2f	80	87.255	ENSOMEG00000006530	polr2f	65	81.818	Oryzias_melastigma
ENSXETG00000006346	polr2f	100	94.488	ENSOGAG00000025463	POLR2F	100	94.488	Otolemur_garnettii
ENSXETG00000006346	polr2f	100	94.488	ENSOARG00000014692	POLR2F	100	94.488	Ovis_aries
ENSXETG00000006346	polr2f	100	94.488	ENSPPAG00000024276	POLR2F	100	94.488	Pan_paniscus
ENSXETG00000006346	polr2f	100	93.701	ENSPPRG00000013030	POLR2F	100	93.701	Panthera_pardus
ENSXETG00000006346	polr2f	82	91.346	ENSPTIG00000000632	POLR2F	85	91.346	Panthera_tigris_altaica
ENSXETG00000006346	polr2f	100	94.488	ENSPTRG00000014356	POLR2F	100	94.488	Pan_troglodytes
ENSXETG00000006346	polr2f	100	94.488	ENSPANG00000023979	POLR2F	100	94.488	Papio_anubis
ENSXETG00000006346	polr2f	100	91.339	ENSPKIG00000002464	polr2f	100	91.339	Paramormyrops_kingsleyae
ENSXETG00000006346	polr2f	56	100.000	ENSPSIG00000013913	POLR2F	100	100.000	Pelodiscus_sinensis
ENSXETG00000006346	polr2f	100	91.339	ENSPMGG00000009619	polr2f	100	91.339	Periophthalmus_magnuspinnatus
ENSXETG00000006346	polr2f	100	94.488	ENSPEMG00000008322	Polr2f	100	94.488	Peromyscus_maniculatus_bairdii
ENSXETG00000006346	polr2f	100	93.701	ENSPCIG00000012000	-	100	93.701	Phascolarctos_cinereus
ENSXETG00000006346	polr2f	100	89.764	ENSPFOG00000000139	polr2f	100	89.764	Poecilia_formosa
ENSXETG00000006346	polr2f	100	89.764	ENSPLAG00000000988	polr2f	100	89.764	Poecilia_latipinna
ENSXETG00000006346	polr2f	100	89.764	ENSPMEG00000019063	polr2f	100	89.764	Poecilia_mexicana
ENSXETG00000006346	polr2f	77	89.796	ENSPREG00000016749	polr2f	100	89.796	Poecilia_reticulata
ENSXETG00000006346	polr2f	100	94.488	ENSPPYG00000011809	POLR2F	100	94.488	Pongo_abelii
ENSXETG00000006346	polr2f	100	94.488	ENSPCOG00000025716	POLR2F	100	94.488	Propithecus_coquereli
ENSXETG00000006346	polr2f	79	92.000	ENSPVAG00000010107	POLR2F	64	92.000	Pteropus_vampyrus
ENSXETG00000006346	polr2f	100	91.339	ENSPNYG00000019790	polr2f	100	91.339	Pundamilia_nyererei
ENSXETG00000006346	polr2f	100	92.126	ENSPNAG00000009017	polr2f	100	92.126	Pygocentrus_nattereri
ENSXETG00000006346	polr2f	100	93.701	ENSRNOG00000011214	Polr2f	100	93.701	Rattus_norvegicus
ENSXETG00000006346	polr2f	100	94.488	ENSRBIG00000044878	POLR2F	100	94.488	Rhinopithecus_bieti
ENSXETG00000006346	polr2f	100	94.488	ENSRROG00000019586	POLR2F	100	94.488	Rhinopithecus_roxellana
ENSXETG00000006346	polr2f	100	94.488	ENSSBOG00000023340	POLR2F	100	94.488	Saimiri_boliviensis_boliviensis
ENSXETG00000006346	polr2f	100	93.701	ENSSHAG00000008502	POLR2F	100	93.701	Sarcophilus_harrisii
ENSXETG00000006346	polr2f	100	92.126	ENSSFOG00015012810	polr2f	100	92.126	Scleropages_formosus
ENSXETG00000006346	polr2f	100	90.551	ENSSMAG00000005354	polr2f	100	90.551	Scophthalmus_maximus
ENSXETG00000006346	polr2f	100	91.339	ENSSDUG00000016273	polr2f	100	91.339	Seriola_dumerili
ENSXETG00000006346	polr2f	100	91.339	ENSSLDG00000024895	polr2f	100	91.339	Seriola_lalandi_dorsalis
ENSXETG00000006346	polr2f	100	95.276	ENSSPUG00000011343	POLR2F	100	95.276	Sphenodon_punctatus
ENSXETG00000006346	polr2f	100	91.339	ENSSPAG00000019646	polr2f	100	91.339	Stegastes_partitus
ENSXETG00000006346	polr2f	100	93.701	ENSSSCG00000000116	POLR2F	100	93.701	Sus_scrofa
ENSXETG00000006346	polr2f	80	95.050	ENSTGUG00000010476	POLR2F	93	94.488	Taeniopygia_guttata
ENSXETG00000006346	polr2f	65	91.463	ENSTGUG00000016504	-	93	91.463	Taeniopygia_guttata
ENSXETG00000006346	polr2f	100	90.551	ENSTRUG00000021130	polr2f	71	90.551	Takifugu_rubripes
ENSXETG00000006346	polr2f	100	91.339	ENSTNIG00000010827	polr2f	100	91.339	Tetraodon_nigroviridis
ENSXETG00000006346	polr2f	79	92.000	ENSTTRG00000004817	POLR2F	64	92.000	Tursiops_truncatus
ENSXETG00000006346	polr2f	100	93.701	ENSUAMG00000020504	POLR2F	100	93.701	Ursus_americanus
ENSXETG00000006346	polr2f	100	93.701	ENSUMAG00000015052	POLR2F	100	93.701	Ursus_maritimus
ENSXETG00000006346	polr2f	83	92.453	ENSVVUG00000024021	POLR2F	80	92.453	Vulpes_vulpes
ENSXETG00000006346	polr2f	100	89.764	ENSXCOG00000015983	polr2f	100	89.764	Xiphophorus_couchianus
ENSXETG00000006346	polr2f	100	89.764	ENSXMAG00000001559	polr2f	100	89.764	Xiphophorus_maculatus