EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000006404 (Gene tree)
Gene ID: -
Gene Symbol: sept11
Alias: -
Full Name: Xenopus tropicalis septin 11 (sept11)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 89897 bases
Position: chrGL172979.1:602993-692889
Accession: NM_001142898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000014014	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSXETP00000058486	MMR_HSR1	PF01926.23	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000065123	-	1778	XM_012968190	ENSXETP00000058486	431 (aa)	XP_012823644	F6WT07
ENSXETT00000014014	-	1293	-	ENSXETP00000014014	431 (aa)	-	F7BXE7

Gene Model

Click here to download ENSXETG00000006404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000006404's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000006404	sept11	74	39.144	ENSXETG00000012261	sept9	58	39.144
ENSXETG00000006404	sept11	67	42.809	ENSXETG00000030888	sept5	90	40.533
ENSXETG00000006404	sept11	66	43.793	ENSXETG00000009151	sept12	89	43.793
ENSXETG00000006404	sept11	80	39.394	ENSXETG00000018605	sept2-a	91	40.533
ENSXETG00000006404	sept11	99	39.636	ENSXETG00000013112	sept7	76	41.813
ENSXETG00000006404	sept11	71	42.722	ENSXETG00000000261	sept3	90	42.722
ENSXETG00000006404	sept11	94	73.697	ENSXETG00000030617	SEPT8	80	74.485
ENSXETG00000006404	sept11	90	76.425	ENSXETG00000013836	sept10	86	76.350
ENSXETG00000006404	sept11	75	37.791	ENSXETG00000030625	SEPT4	90	37.791
ENSXETG00000006404	sept11	75	41.317	ENSXETG00000012166	sept2	90	41.317

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000006404	sept11	100	93.039	ENSG00000138758	SEPT11	100	93.039	Homo_sapiens
ENSXETG00000006404	sept11	83	93.593	ENSAMEG00000013821	SEPT11	91	93.370	Ailuropoda_melanoleuca
ENSXETG00000006404	sept11	92	92.191	ENSAPLG00000010395	SEPT11	93	92.911	Anas_platyrhynchos
ENSXETG00000006404	sept11	100	91.879	ENSACAG00000012255	SEPT11	100	91.879	Anolis_carolinensis
ENSXETG00000006404	sept11	100	93.039	ENSANAG00000029750	SEPT11	100	93.039	Aotus_nancymaae
ENSXETG00000006404	sept11	100	93.039	ENSBTAG00000021372	SEPT11	100	93.039	Bos_taurus
ENSXETG00000006404	sept11	97	93.571	ENSCJAG00000014744	SEPT11	96	93.571	Callithrix_jacchus
ENSXETG00000006404	sept11	93	92.250	ENSCAFG00020011148	SEPT11	94	93.384	Canis_lupus_dingo
ENSXETG00000006404	sept11	100	93.039	ENSCHIG00000021075	SEPT11	100	93.039	Capra_hircus
ENSXETG00000006404	sept11	100	93.039	ENSTSYG00000013404	-	100	93.039	Carlito_syrichta
ENSXETG00000006404	sept11	90	85.787	ENSCAPG00000015684	SEPT11	92	85.642	Cavia_aperea
ENSXETG00000006404	sept11	100	93.271	ENSCPOG00000009037	SEPT11	100	93.271	Cavia_porcellus
ENSXETG00000006404	sept11	100	93.039	ENSCCAG00000022420	SEPT11	100	93.039	Cebus_capucinus
ENSXETG00000006404	sept11	100	93.039	ENSCATG00000027299	SEPT11	100	93.039	Cercocebus_atys
ENSXETG00000006404	sept11	97	93.810	ENSCLAG00000006114	SEPT11	99	93.810	Chinchilla_lanigera
ENSXETG00000006404	sept11	100	93.039	ENSCSAG00000004591	SEPT11	100	93.039	Chlorocebus_sabaeus
ENSXETG00000006404	sept11	100	91.183	ENSCPBG00000019417	SEPT11	100	91.183	Chrysemys_picta_bellii
ENSXETG00000006404	sept11	97	93.571	ENSCANG00000032458	SEPT11	96	93.571	Colobus_angolensis_palliatus
ENSXETG00000006404	sept11	100	92.575	ENSCGRG00001000184	Sept11	100	92.575	Cricetulus_griseus_chok1gshd
ENSXETG00000006404	sept11	100	92.343	ENSCGRG00000002281	Sept11	100	92.343	Cricetulus_griseus_crigri
ENSXETG00000006404	sept11	94	93.069	ENSDNOG00000003551	SEPT11	94	93.069	Dasypus_novemcinctus
ENSXETG00000006404	sept11	100	93.039	ENSDORG00000015527	Sept11	100	93.039	Dipodomys_ordii
ENSXETG00000006404	sept11	83	91.339	ENSETEG00000000950	SEPT11	85	90.945	Echinops_telfairi
ENSXETG00000006404	sept11	99	80.516	ENSEBUG00000003985	SEPT11	94	82.134	Eptatretus_burgeri
ENSXETG00000006404	sept11	100	92.807	ENSEASG00005016442	SEPT11	100	92.807	Equus_asinus_asinus
ENSXETG00000006404	sept11	100	93.039	ENSECAG00000005768	SEPT11	100	93.039	Equus_caballus
ENSXETG00000006404	sept11	100	93.039	ENSFCAG00000027412	SEPT11	100	93.039	Felis_catus
ENSXETG00000006404	sept11	93	91.250	ENSFALG00000008500	SEPT11	91	91.067	Ficedula_albicollis
ENSXETG00000006404	sept11	97	93.571	ENSFDAG00000020305	SEPT11	100	93.571	Fukomys_damarensis
ENSXETG00000006404	sept11	99	92.506	ENSGALG00000011476	SEPT11	97	92.575	Gallus_gallus
ENSXETG00000006404	sept11	100	91.415	ENSGAGG00000025821	SEPT11	100	91.415	Gopherus_agassizii
ENSXETG00000006404	sept11	97	93.571	ENSGGOG00000015115	SEPT11	96	93.571	Gorilla_gorilla
ENSXETG00000006404	sept11	100	93.039	ENSHGLG00000015983	SEPT11	100	93.039	Heterocephalus_glaber_female
ENSXETG00000006404	sept11	90	93.590	ENSHGLG00100018878	SEPT11	92	93.384	Heterocephalus_glaber_male
ENSXETG00000006404	sept11	100	93.039	ENSSTOG00000008117	SEPT11	100	93.039	Ictidomys_tridecemlineatus
ENSXETG00000006404	sept11	100	93.039	ENSJJAG00000007698	Sept11	100	93.039	Jaculus_jaculus
ENSXETG00000006404	sept11	91	91.603	ENSLACG00000006461	SEPT11	94	91.795	Latimeria_chalumnae
ENSXETG00000006404	sept11	93	93.017	ENSLAFG00000016488	SEPT11	99	91.183	Loxodonta_africana
ENSXETG00000006404	sept11	100	93.039	ENSMFAG00000042066	SEPT11	100	93.039	Macaca_fascicularis
ENSXETG00000006404	sept11	100	93.039	ENSMMUG00000019901	SEPT11	100	93.039	Macaca_mulatta
ENSXETG00000006404	sept11	100	93.039	ENSMNEG00000044831	SEPT11	100	93.039	Macaca_nemestrina
ENSXETG00000006404	sept11	97	93.571	ENSMLEG00000041438	SEPT11	96	93.571	Mandrillus_leucophaeus
ENSXETG00000006404	sept11	90	93.590	ENSMGAG00000009422	SEPT11	91	93.384	Meleagris_gallopavo
ENSXETG00000006404	sept11	100	92.343	ENSMAUG00000008193	Sept11	100	92.343	Mesocricetus_auratus
ENSXETG00000006404	sept11	100	90.719	ENSMICG00000033844	SEPT11	100	90.719	Microcebus_murinus
ENSXETG00000006404	sept11	100	92.807	ENSMOCG00000014932	Sept11	100	92.807	Microtus_ochrogaster
ENSXETG00000006404	sept11	100	92.807	ENSMODG00000011825	SEPT11	100	92.807	Monodelphis_domestica
ENSXETG00000006404	sept11	99	92.791	MGP_CAROLIEiJ_G0027424	Sept11	100	92.575	Mus_caroli
ENSXETG00000006404	sept11	99	92.791	ENSMUSG00000058013	Sept11	100	92.575	Mus_musculus
ENSXETG00000006404	sept11	93	92.768	MGP_PahariEiJ_G0017202	Sept11	95	92.804	Mus_pahari
ENSXETG00000006404	sept11	99	92.791	MGP_SPRETEiJ_G0028421	Sept11	100	92.575	Mus_spretus
ENSXETG00000006404	sept11	93	90.727	ENSMPUG00000008207	SEPT11	92	90.657	Mustela_putorius_furo
ENSXETG00000006404	sept11	53	89.474	ENSMLUG00000024451	-	99	88.987	Myotis_lucifugus
ENSXETG00000006404	sept11	100	92.807	ENSNGAG00000000462	Sept11	100	92.807	Nannospalax_galili
ENSXETG00000006404	sept11	100	93.039	ENSNLEG00000032040	SEPT11	100	93.039	Nomascus_leucogenys
ENSXETG00000006404	sept11	100	81.671	ENSMEUG00000013950	-	100	81.671	Notamacropus_eugenii
ENSXETG00000006404	sept11	80	95.808	ENSOPRG00000000156	SEPT11	80	95.808	Ochotona_princeps
ENSXETG00000006404	sept11	100	93.039	ENSODEG00000000877	SEPT11	100	93.039	Octodon_degus
ENSXETG00000006404	sept11	96	90.843	ENSOANG00000013643	SEPT11	99	86.916	Ornithorhynchus_anatinus
ENSXETG00000006404	sept11	93	92.519	ENSOCUG00000001289	SEPT11	85	92.327	Oryctolagus_cuniculus
ENSXETG00000006404	sept11	91	93.367	ENSOGAG00000005210	SEPT11	92	93.165	Otolemur_garnettii
ENSXETG00000006404	sept11	98	92.908	ENSOARG00000017493	SEPT11	94	92.908	Ovis_aries
ENSXETG00000006404	sept11	100	93.039	ENSPPAG00000041700	SEPT11	100	93.039	Pan_paniscus
ENSXETG00000006404	sept11	100	93.039	ENSPPRG00000007487	SEPT11	100	93.039	Panthera_pardus
ENSXETG00000006404	sept11	100	93.039	ENSPTIG00000017796	SEPT11	100	93.039	Panthera_tigris_altaica
ENSXETG00000006404	sept11	100	93.039	ENSPTRG00000016192	SEPT11	100	93.039	Pan_troglodytes
ENSXETG00000006404	sept11	97	93.571	ENSPANG00000021634	SEPT11	96	93.571	Papio_anubis
ENSXETG00000006404	sept11	90	92.308	ENSPSIG00000017552	SEPT11	91	92.112	Pelodiscus_sinensis
ENSXETG00000006404	sept11	100	92.807	ENSPEMG00000016338	Sept11	100	92.807	Peromyscus_maniculatus_bairdii
ENSXETG00000006404	sept11	100	93.039	ENSPCIG00000028014	SEPT11	100	93.039	Phascolarctos_cinereus
ENSXETG00000006404	sept11	93	93.017	ENSPPYG00000014864	SEPT11	92	92.822	Pongo_abelii
ENSXETG00000006404	sept11	83	92.520	ENSPCAG00000004069	SEPT11	85	92.520	Procavia_capensis
ENSXETG00000006404	sept11	100	92.575	ENSPCOG00000014774	SEPT11	100	92.575	Propithecus_coquereli
ENSXETG00000006404	sept11	99	92.791	ENSRNOG00000002182	Sept11	100	92.575	Rattus_norvegicus
ENSXETG00000006404	sept11	100	93.039	ENSRBIG00000024343	SEPT11	100	93.039	Rhinopithecus_bieti
ENSXETG00000006404	sept11	100	93.039	ENSRROG00000038768	SEPT11	100	93.039	Rhinopithecus_roxellana
ENSXETG00000006404	sept11	100	93.039	ENSSBOG00000020488	SEPT11	100	93.039	Saimiri_boliviensis_boliviensis
ENSXETG00000006404	sept11	100	93.039	ENSSHAG00000006125	SEPT11	100	93.039	Sarcophilus_harrisii
ENSXETG00000006404	sept11	93	90.000	ENSSPUG00000006377	SEPT11	95	89.801	Sphenodon_punctatus
ENSXETG00000006404	sept11	100	93.039	ENSSSCG00000008986	SEPT11	100	93.039	Sus_scrofa
ENSXETG00000006404	sept11	90	91.192	ENSTGUG00000001707	-	83	91.003	Taeniopygia_guttata
ENSXETG00000006404	sept11	77	94.595	ENSTBEG00000012851	SEPT11	79	94.595	Tupaia_belangeri
ENSXETG00000006404	sept11	85	96.457	ENSTTRG00000014833	SEPT11	85	96.457	Tursiops_truncatus
ENSXETG00000006404	sept11	100	93.039	ENSUAMG00000017287	SEPT11	100	93.039	Ursus_americanus
ENSXETG00000006404	sept11	93	92.020	ENSUMAG00000007904	SEPT11	89	93.401	Ursus_maritimus
ENSXETG00000006404	sept11	93	92.250	ENSVVUG00000023346	SEPT11	94	92.911	Vulpes_vulpes