EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000006575 (Gene tree)
Gene ID: -
Gene Symbol: znf420
Alias: -
Full Name: Xenopus tropicalis zinc finger protein 420 (znf420)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 22025 bases
Position: chrGL173165.1:328668-350692
Accession: NM_001016394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000014400	zf-C2H2	PF00096.26	4.6e-116	1	19
ENSXETP00000014400	zf-C2H2	PF00096.26	4.6e-116	2	19
ENSXETP00000014400	zf-C2H2	PF00096.26	4.6e-116	3	19
ENSXETP00000014400	zf-C2H2	PF00096.26	4.6e-116	4	19
ENSXETP00000014400	zf-C2H2	PF00096.26	4.6e-116	5	19
ENSXETP00000014400	zf-C2H2	PF00096.26	4.6e-116	6	19
ENSXETP00000014400	zf-C2H2	PF00096.26	4.6e-116	7	19
ENSXETP00000014400	zf-C2H2	PF00096.26	4.6e-116	8	19
ENSXETP00000014400	zf-C2H2	PF00096.26	4.6e-116	9	19
ENSXETP00000014400	zf-C2H2	PF00096.26	4.6e-116	10	19
ENSXETP00000014400	zf-C2H2	PF00096.26	4.6e-116	11	19
ENSXETP00000014400	zf-C2H2	PF00096.26	4.6e-116	12	19
ENSXETP00000014400	zf-C2H2	PF00096.26	4.6e-116	13	19
ENSXETP00000014400	zf-C2H2	PF00096.26	4.6e-116	14	19
ENSXETP00000014400	zf-C2H2	PF00096.26	4.6e-116	15	19
ENSXETP00000014400	zf-C2H2	PF00096.26	4.6e-116	16	19
ENSXETP00000014400	zf-C2H2	PF00096.26	4.6e-116	17	19
ENSXETP00000014400	zf-C2H2	PF00096.26	4.6e-116	18	19
ENSXETP00000014400	zf-C2H2	PF00096.26	4.6e-116	19	19
ENSXETP00000014401	zf-C2H2	PF00096.26	6.5e-71	1	11
ENSXETP00000014401	zf-C2H2	PF00096.26	6.5e-71	2	11
ENSXETP00000014401	zf-C2H2	PF00096.26	6.5e-71	3	11
ENSXETP00000014401	zf-C2H2	PF00096.26	6.5e-71	4	11
ENSXETP00000014401	zf-C2H2	PF00096.26	6.5e-71	5	11
ENSXETP00000014401	zf-C2H2	PF00096.26	6.5e-71	6	11
ENSXETP00000014401	zf-C2H2	PF00096.26	6.5e-71	7	11
ENSXETP00000014401	zf-C2H2	PF00096.26	6.5e-71	8	11
ENSXETP00000014401	zf-C2H2	PF00096.26	6.5e-71	9	11
ENSXETP00000014401	zf-C2H2	PF00096.26	6.5e-71	10	11
ENSXETP00000014401	zf-C2H2	PF00096.26	6.5e-71	11	11
ENSXETP00000014401	zf-met	PF12874.7	2.5e-12	1	2
ENSXETP00000014401	zf-met	PF12874.7	2.5e-12	2	2
ENSXETP00000014400	zf-met	PF12874.7	1.5e-05	1	2
ENSXETP00000014400	zf-met	PF12874.7	1.5e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000014400	-	2358	-	ENSXETP00000014400	744 (aa)	-	F6ZA87
ENSXETT00000014401	-	1566	-	ENSXETP00000014401	421 (aa)	-	Q28GY2

Gene Model

Click here to download ENSXETG00000006575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000006575's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000006575	znf420	74	46.763	ENSXETG00000021294	zbtb24	50	46.763
ENSXETG00000006575	znf420	79	38.525	ENSXETG00000033098	ZNF366	58	37.278
ENSXETG00000006575	znf420	76	44.379	ENSXETG00000001910	znf646	99	44.379
ENSXETG00000006575	znf420	84	42.540	ENSXETG00000001911	znf668	95	46.125
ENSXETG00000006575	znf420	77	47.451	ENSXETG00000027484	znf432	62	47.451
ENSXETG00000006575	znf420	83	45.062	ENSXETG00000006263	gfi1b	63	45.963
ENSXETG00000006575	znf420	76	47.619	ENSXETG00000020587	ovol1	58	44.231
ENSXETG00000006575	znf420	76	49.107	ENSXETG00000023006	gfi1	50	49.107
ENSXETG00000006575	znf420	85	50.233	ENSXETG00000031460	-	100	50.233
ENSXETG00000006575	znf420	76	52.787	ENSXETG00000034213	-	99	52.787
ENSXETG00000006575	znf420	90	45.333	ENSXETG00000024006	snai2	72	45.333
ENSXETG00000006575	znf420	83	51.489	ENSXETG00000023643	znf484	100	51.264
ENSXETG00000006575	znf420	82	48.772	ENSXETG00000016062	znf184	99	48.772
ENSXETG00000006575	znf420	76	56.627	ENSXETG00000032038	-	94	56.627
ENSXETG00000006575	znf420	87	41.115	ENSXETG00000004510	gzf1	53	40.702
ENSXETG00000006575	znf420	76	53.906	ENSXETG00000024118	-	100	53.906
ENSXETG00000006575	znf420	76	50.855	ENSXETG00000013882	-	100	52.574
ENSXETG00000006575	znf420	76	46.250	ENSXETG00000016091	e4f1	73	46.250
ENSXETG00000006575	znf420	81	50.000	ENSXETG00000033508	-	82	50.000
ENSXETG00000006575	znf420	83	48.731	ENSXETG00000031310	-	71	48.239
ENSXETG00000006575	znf420	86	40.079	ENSXETG00000002101	prdm5	85	36.364
ENSXETG00000006575	znf420	78	49.645	ENSXETG00000017175	-	100	51.290
ENSXETG00000006575	znf420	78	41.606	ENSXETG00000027366	snai1	67	41.606
ENSXETG00000006575	znf420	88	39.286	ENSXETG00000001980	znf408	76	38.811
ENSXETG00000006575	znf420	77	48.438	ENSXETG00000010512	-	99	41.964
ENSXETG00000006575	znf420	76	36.089	ENSXETG00000013744	znf319	91	38.558
ENSXETG00000006575	znf420	95	49.798	ENSXETG00000002690	-	89	49.798
ENSXETG00000006575	znf420	76	48.162	ENSXETG00000026673	-	90	48.221
ENSXETG00000006575	znf420	81	40.299	ENSXETG00000033348	ZBTB46	59	41.333
ENSXETG00000006575	znf420	77	36.970	ENSXETG00000004190	patz1	53	36.905
ENSXETG00000006575	znf420	76	52.390	ENSXETG00000023597	-	100	52.431
ENSXETG00000006575	znf420	72	50.943	ENSXETG00000012326	sall4	57	47.170
ENSXETG00000006575	znf420	77	59.091	ENSXETG00000008801	znf628	96	59.091
ENSXETG00000006575	znf420	78	46.643	ENSXETG00000030307	-	100	49.505
ENSXETG00000006575	znf420	93	37.500	ENSXETG00000031873	ZBTB20	50	37.500
ENSXETG00000006575	znf420	97	57.627	ENSXETG00000030249	-	97	56.024
ENSXETG00000006575	znf420	77	51.706	ENSXETG00000027149	-	100	51.706
ENSXETG00000006575	znf420	85	48.980	ENSXETG00000018417	sall1	55	55.556
ENSXETG00000006575	znf420	73	45.783	ENSXETG00000012506	znf91	99	45.783
ENSXETG00000006575	znf420	76	40.068	ENSXETG00000015125	-	97	41.066
ENSXETG00000006575	znf420	79	40.000	ENSXETG00000024897	ovol2	54	40.000
ENSXETG00000006575	znf420	76	50.218	ENSXETG00000006490	znf350	95	50.218
ENSXETG00000006575	znf420	83	45.263	ENSXETG00000031192	-	100	48.958
ENSXETG00000006575	znf420	78	48.255	ENSXETG00000025282	-	100	48.255
ENSXETG00000006575	znf420	89	53.812	ENSXETG00000030967	-	99	53.812
ENSXETG00000006575	znf420	84	37.092	ENSXETG00000027536	znf574	91	39.829
ENSXETG00000006575	znf420	95	40.373	ENSXETG00000006162	zbtb47	57	40.373
ENSXETG00000006575	znf420	84	46.552	ENSXETG00000015435	rreb1	54	46.552
ENSXETG00000006575	znf420	91	49.038	ENSXETG00000016781	-	99	57.895
ENSXETG00000006575	znf420	76	46.691	ENSXETG00000002717	-	100	47.039
ENSXETG00000006575	znf420	75	37.102	ENSXETG00000009952	zbtb41	66	37.102

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000006575	znf420	84	41.259	ENSAPOG00000004328	-	94	41.161	Acanthochromis_polyacanthus
ENSXETG00000006575	znf420	77	48.077	ENSAPOG00000013511	-	62	46.544	Acanthochromis_polyacanthus
ENSXETG00000006575	znf420	76	44.560	ENSACIG00000010739	-	79	44.560	Amphilophus_citrinellus
ENSXETG00000006575	znf420	85	42.216	ENSAOCG00000007045	-	95	42.216	Amphiprion_ocellaris
ENSXETG00000006575	znf420	77	48.148	ENSAPEG00000016483	-	72	45.000	Amphiprion_percula
ENSXETG00000006575	znf420	81	45.513	ENSAPEG00000001596	-	74	47.596	Amphiprion_percula
ENSXETG00000006575	znf420	99	42.276	ENSATEG00000006085	-	96	45.415	Anabas_testudineus
ENSXETG00000006575	znf420	76	53.560	ENSACAG00000025537	-	100	53.560	Anolis_carolinensis
ENSXETG00000006575	znf420	85	52.174	ENSACAG00000000082	-	99	52.297	Anolis_carolinensis
ENSXETG00000006575	znf420	82	56.061	ENSAMXG00000035949	-	84	56.061	Astyanax_mexicanus
ENSXETG00000006575	znf420	82	39.583	ENSAMXG00000017199	-	50	39.542	Astyanax_mexicanus
ENSXETG00000006575	znf420	81	52.444	ENSAMXG00000035145	-	67	56.923	Astyanax_mexicanus
ENSXETG00000006575	znf420	81	53.409	ENSAMXG00000012873	-	100	53.409	Astyanax_mexicanus
ENSXETG00000006575	znf420	80	51.009	ENSAMXG00000032237	-	96	51.009	Astyanax_mexicanus
ENSXETG00000006575	znf420	83	56.373	ENSAMXG00000033013	-	85	56.373	Astyanax_mexicanus
ENSXETG00000006575	znf420	76	52.632	ENSAMXG00000026143	-	95	52.632	Astyanax_mexicanus
ENSXETG00000006575	znf420	88	52.381	ENSAMXG00000036257	-	97	52.381	Astyanax_mexicanus
ENSXETG00000006575	znf420	77	45.118	ENSCVAG00000011235	-	96	44.541	Cyprinodon_variegatus
ENSXETG00000006575	znf420	79	45.395	ENSELUG00000013357	-	86	46.835	Esox_lucius
ENSXETG00000006575	znf420	81	44.340	ENSELUG00000021287	-	85	44.340	Esox_lucius
ENSXETG00000006575	znf420	88	43.421	ENSELUG00000013844	-	79	44.615	Esox_lucius
ENSXETG00000006575	znf420	89	44.359	ENSFHEG00000019915	-	78	44.359	Fundulus_heteroclitus
ENSXETG00000006575	znf420	77	50.000	ENSGMOG00000003238	-	100	50.000	Gadus_morhua
ENSXETG00000006575	znf420	89	43.377	ENSGAFG00000003150	-	99	51.111	Gambusia_affinis
ENSXETG00000006575	znf420	81	41.042	ENSGAFG00000012977	-	90	41.042	Gambusia_affinis
ENSXETG00000006575	znf420	91	53.750	ENSIPUG00000004428	-	87	53.750	Ictalurus_punctatus
ENSXETG00000006575	znf420	84	50.753	ENSIPUG00000006916	-	84	50.753	Ictalurus_punctatus
ENSXETG00000006575	znf420	77	55.330	ENSIPUG00000021556	-	93	55.330	Ictalurus_punctatus
ENSXETG00000006575	znf420	74	47.162	ENSKMAG00000004988	-	92	46.809	Kryptolebias_marmoratus
ENSXETG00000006575	znf420	78	43.813	ENSLOCG00000014366	-	95	43.269	Lepisosteus_oculatus
ENSXETG00000006575	znf420	80	43.345	ENSLOCG00000014144	-	100	44.586	Lepisosteus_oculatus
ENSXETG00000006575	znf420	99	42.276	ENSMAMG00000019301	-	99	50.595	Mastacembelus_armatus
ENSXETG00000006575	znf420	97	45.667	ENSMAMG00000016542	-	76	46.544	Mastacembelus_armatus
ENSXETG00000006575	znf420	80	44.172	ENSMMOG00000009852	-	86	44.172	Mola_mola
ENSXETG00000006575	znf420	89	47.561	ENSMALG00000005554	-	97	47.926	Monopterus_albus
ENSXETG00000006575	znf420	76	47.090	ENSOCUG00000005876	-	100	46.032	Oryctolagus_cuniculus
ENSXETG00000006575	znf420	86	47.508	ENSPKIG00000006616	-	65	47.508	Paramormyrops_kingsleyae
ENSXETG00000006575	znf420	79	41.014	ENSPMGG00000017633	-	91	40.559	Periophthalmus_magnuspinnatus
ENSXETG00000006575	znf420	81	41.368	ENSPFOG00000010682	-	97	41.772	Poecilia_formosa
ENSXETG00000006575	znf420	95	41.484	ENSPLAG00000002892	-	69	44.330	Poecilia_latipinna
ENSXETG00000006575	znf420	81	41.694	ENSPMEG00000001399	-	90	41.694	Poecilia_mexicana
ENSXETG00000006575	znf420	97	40.851	ENSPREG00000002582	-	80	40.851	Poecilia_reticulata
ENSXETG00000006575	znf420	81	41.694	ENSPREG00000001386	-	90	41.694	Poecilia_reticulata
ENSXETG00000006575	znf420	84	42.395	ENSPNAG00000025570	-	83	42.395	Pygocentrus_nattereri
ENSXETG00000006575	znf420	82	51.131	ENSPNAG00000000219	-	89	52.047	Pygocentrus_nattereri
ENSXETG00000006575	znf420	84	56.693	ENSPNAG00000015116	-	84	56.693	Pygocentrus_nattereri
ENSXETG00000006575	znf420	77	48.964	ENSSFOG00015006108	-	59	49.498	Scleropages_formosus
ENSXETG00000006575	znf420	73	62.745	ENSSMAG00000009115	-	94	62.745	Scophthalmus_maximus
ENSXETG00000006575	znf420	76	53.448	ENSSDUG00000002195	-	92	51.190	Seriola_dumerili
ENSXETG00000006575	znf420	99	42.547	ENSSDUG00000006463	-	98	42.547	Seriola_dumerili
ENSXETG00000006575	znf420	74	54.444	ENSSLDG00000006724	-	99	52.071	Seriola_lalandi_dorsalis
ENSXETG00000006575	znf420	86	42.321	ENSSLDG00000020727	-	95	51.235	Seriola_lalandi_dorsalis
ENSXETG00000006575	znf420	77	48.341	ENSSPAG00000012960	-	82	48.341	Stegastes_partitus
ENSXETG00000006575	znf420	80	56.818	ENSSPAG00000021008	-	96	56.818	Stegastes_partitus
ENSXETG00000006575	znf420	77	50.000	ENSTRUG00000005321	-	99	40.678	Takifugu_rubripes
ENSXETG00000006575	znf420	77	49.180	ENSTRUG00000021675	-	80	49.180	Takifugu_rubripes
ENSXETG00000006575	znf420	81	43.189	ENSTNIG00000008200	-	100	47.706	Tetraodon_nigroviridis
ENSXETG00000006575	znf420	76	50.459	ENSTNIG00000000320	-	100	50.459	Tetraodon_nigroviridis
ENSXETG00000006575	znf420	74	53.061	ENSXCOG00000009665	-	91	53.061	Xiphophorus_couchianus
ENSXETG00000006575	znf420	81	41.368	ENSXMAG00000028625	-	90	41.368	Xiphophorus_maculatus