EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000007088 (Gene tree)
Gene ID: -
Gene Symbol: clp1
Alias: -
Full Name: Xenopus tropicalis cleavage and polyadenylation factor I subunit 1 (clp1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 6893 bases
Position: chrGL173350.1:357672-364564
Accession: NM_001008001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000015427	Clp1	PF06807.14	6.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000015427	-	1664	-	ENSXETP00000015427	437 (aa)	XP_017950844	Q66JK4

Gene Model

Click here to download ENSXETG00000007088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000007088's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000007088	clp1	95	78.657	ENSG00000172409	CLP1	98	77.938	Homo_sapiens
ENSXETG00000007088	clp1	99	70.814	ENSAPOG00000008242	clp1	98	70.588	Acanthochromis_polyacanthus
ENSXETG00000007088	clp1	95	78.417	ENSAMEG00000014551	CLP1	96	77.698	Ailuropoda_melanoleuca
ENSXETG00000007088	clp1	99	70.588	ENSACIG00000006310	clp1	98	70.362	Amphilophus_citrinellus
ENSXETG00000007088	clp1	99	71.267	ENSAOCG00000010681	clp1	98	72.922	Amphiprion_ocellaris
ENSXETG00000007088	clp1	99	71.267	ENSAPEG00000012165	clp1	98	72.986	Amphiprion_percula
ENSXETG00000007088	clp1	100	70.203	ENSATEG00000012374	clp1	100	69.977	Anabas_testudineus
ENSXETG00000007088	clp1	95	79.227	ENSACAG00000007139	CLP1	97	78.502	Anolis_carolinensis
ENSXETG00000007088	clp1	95	78.657	ENSANAG00000034935	CLP1	98	77.938	Aotus_nancymaae
ENSXETG00000007088	clp1	100	69.977	ENSACLG00000013573	clp1	100	69.752	Astatotilapia_calliptera
ENSXETG00000007088	clp1	95	73.397	ENSAMXG00000014194	clp1	98	71.971	Astyanax_mexicanus
ENSXETG00000007088	clp1	95	78.417	ENSBTAG00000006493	CLP1	98	77.698	Bos_taurus
ENSXETG00000007088	clp1	94	46.778	WBGene00010304	clpf-1	97	46.429	Caenorhabditis_elegans
ENSXETG00000007088	clp1	95	78.657	ENSCJAG00000008748	CLP1	98	77.938	Callithrix_jacchus
ENSXETG00000007088	clp1	95	78.417	ENSCAFG00000007815	CLP1	98	77.698	Canis_familiaris
ENSXETG00000007088	clp1	95	78.417	ENSCAFG00020000903	CLP1	98	77.698	Canis_lupus_dingo
ENSXETG00000007088	clp1	95	78.657	ENSCHIG00000023497	CLP1	98	77.698	Capra_hircus
ENSXETG00000007088	clp1	95	78.657	ENSTSYG00000006824	CLP1	96	77.938	Carlito_syrichta
ENSXETG00000007088	clp1	95	78.657	ENSCAPG00000009703	CLP1	98	77.938	Cavia_aperea
ENSXETG00000007088	clp1	95	78.606	ENSCPOG00000012554	CLP1	99	77.885	Cavia_porcellus
ENSXETG00000007088	clp1	95	78.417	ENSCCAG00000031957	CLP1	98	77.698	Cebus_capucinus
ENSXETG00000007088	clp1	100	76.201	ENSCATG00000044628	CLP1	98	77.938	Cercocebus_atys
ENSXETG00000007088	clp1	95	78.657	ENSCLAG00000004094	CLP1	98	77.938	Chinchilla_lanigera
ENSXETG00000007088	clp1	95	78.657	ENSCSAG00000005994	CLP1	98	77.938	Chlorocebus_sabaeus
ENSXETG00000007088	clp1	95	79.469	ENSCPBG00000016843	CLP1	97	78.502	Chrysemys_picta_bellii
ENSXETG00000007088	clp1	95	59.375	ENSCING00000003779	-	96	58.894	Ciona_intestinalis
ENSXETG00000007088	clp1	94	60.437	ENSCSAVG00000003437	-	96	59.709	Ciona_savignyi
ENSXETG00000007088	clp1	95	78.657	ENSCANG00000034335	CLP1	98	77.938	Colobus_angolensis_palliatus
ENSXETG00000007088	clp1	95	78.177	ENSCGRG00001002227	CLP1	98	77.458	Cricetulus_griseus_chok1gshd
ENSXETG00000007088	clp1	95	78.177	ENSCGRG00000004328	CLP1	98	77.458	Cricetulus_griseus_crigri
ENSXETG00000007088	clp1	95	73.159	ENSCSEG00000008614	clp1	95	72.922	Cynoglossus_semilaevis
ENSXETG00000007088	clp1	97	71.594	ENSCVAG00000020101	clp1	98	71.363	Cyprinodon_variegatus
ENSXETG00000007088	clp1	95	73.747	ENSDARG00000063663	clp1	95	73.031	Danio_rerio
ENSXETG00000007088	clp1	95	78.365	ENSDNOG00000042415	CLP1	88	77.644	Dasypus_novemcinctus
ENSXETG00000007088	clp1	95	78.417	ENSDORG00000014685	Clp1	98	77.698	Dipodomys_ordii
ENSXETG00000007088	clp1	94	53.382	FBgn0033842	cbc	97	53.140	Drosophila_melanogaster
ENSXETG00000007088	clp1	95	78.657	ENSETEG00000003009	CLP1	98	77.938	Echinops_telfairi
ENSXETG00000007088	clp1	95	67.470	ENSEBUG00000011648	clp1	97	67.229	Eptatretus_burgeri
ENSXETG00000007088	clp1	95	78.657	ENSEASG00005002093	CLP1	99	76.636	Equus_asinus_asinus
ENSXETG00000007088	clp1	95	78.657	ENSECAG00000011597	CLP1	99	76.636	Equus_caballus
ENSXETG00000007088	clp1	95	78.177	ENSEEUG00000012771	CLP1	98	77.458	Erinaceus_europaeus
ENSXETG00000007088	clp1	95	73.159	ENSELUG00000024048	clp1	100	70.429	Esox_lucius
ENSXETG00000007088	clp1	95	78.417	ENSFCAG00000006633	CLP1	99	76.402	Felis_catus
ENSXETG00000007088	clp1	95	79.227	ENSFALG00000011145	CLP1	97	78.744	Ficedula_albicollis
ENSXETG00000007088	clp1	95	78.657	ENSFDAG00000000234	CLP1	98	77.938	Fukomys_damarensis
ENSXETG00000007088	clp1	97	71.824	ENSFHEG00000014760	CLP1	98	71.594	Fundulus_heteroclitus
ENSXETG00000007088	clp1	99	71.754	ENSGMOG00000019340	clp1	98	71.526	Gadus_morhua
ENSXETG00000007088	clp1	95	79.710	ENSGALG00000007370	CLP1	97	79.227	Gallus_gallus
ENSXETG00000007088	clp1	97	72.286	ENSGAFG00000003020	clp1	99	72.120	Gambusia_affinis
ENSXETG00000007088	clp1	99	71.041	ENSGACG00000017832	clp1	98	70.814	Gasterosteus_aculeatus
ENSXETG00000007088	clp1	95	79.710	ENSGAGG00000013279	CLP1	97	78.744	Gopherus_agassizii
ENSXETG00000007088	clp1	95	78.657	ENSGGOG00000023006	CLP1	98	77.938	Gorilla_gorilla
ENSXETG00000007088	clp1	100	70.203	ENSHBUG00000010436	clp1	100	69.977	Haplochromis_burtoni
ENSXETG00000007088	clp1	95	78.657	ENSHGLG00000009914	CLP1	98	77.938	Heterocephalus_glaber_female
ENSXETG00000007088	clp1	95	78.657	ENSHGLG00100006105	CLP1	98	77.938	Heterocephalus_glaber_male
ENSXETG00000007088	clp1	95	73.397	ENSHCOG00000010072	clp1	95	73.159	Hippocampus_comes
ENSXETG00000007088	clp1	95	73.333	ENSIPUG00000016238	clp1	97	71.198	Ictalurus_punctatus
ENSXETG00000007088	clp1	95	78.417	ENSSTOG00000029257	CLP1	98	77.698	Ictidomys_tridecemlineatus
ENSXETG00000007088	clp1	95	78.417	ENSJJAG00000023691	Clp1	98	77.698	Jaculus_jaculus
ENSXETG00000007088	clp1	99	71.719	ENSKMAG00000011990	clp1	98	71.493	Kryptolebias_marmoratus
ENSXETG00000007088	clp1	100	71.332	ENSLBEG00000010201	clp1	100	71.106	Labrus_bergylta
ENSXETG00000007088	clp1	95	76.442	ENSLACG00000003160	CLP1	98	75.481	Latimeria_chalumnae
ENSXETG00000007088	clp1	71	75.155	ENSLOCG00000008074	clp1	100	74.534	Lepisosteus_oculatus
ENSXETG00000007088	clp1	95	78.417	ENSLAFG00000014907	CLP1	98	77.698	Loxodonta_africana
ENSXETG00000007088	clp1	95	78.657	ENSMFAG00000046074	CLP1	98	77.938	Macaca_fascicularis
ENSXETG00000007088	clp1	95	78.657	ENSMMUG00000038007	CLP1	96	77.938	Macaca_mulatta
ENSXETG00000007088	clp1	95	78.657	ENSMNEG00000000259	CLP1	98	77.938	Macaca_nemestrina
ENSXETG00000007088	clp1	100	76.201	ENSMLEG00000043556	CLP1	98	77.938	Mandrillus_leucophaeus
ENSXETG00000007088	clp1	99	72.500	ENSMAMG00000002149	clp1	99	72.273	Mastacembelus_armatus
ENSXETG00000007088	clp1	100	69.977	ENSMZEG00005002850	clp1	100	69.752	Maylandia_zebra
ENSXETG00000007088	clp1	95	79.710	ENSMGAG00000009643	CLP1	97	79.227	Meleagris_gallopavo
ENSXETG00000007088	clp1	95	77.644	ENSMAUG00000016261	Clp1	97	76.923	Mesocricetus_auratus
ENSXETG00000007088	clp1	95	78.417	ENSMICG00000004895	CLP1	98	77.698	Microcebus_murinus
ENSXETG00000007088	clp1	95	78.417	ENSMOCG00000005498	Clp1	98	77.698	Microtus_ochrogaster
ENSXETG00000007088	clp1	99	72.851	ENSMMOG00000003229	clp1	98	72.624	Mola_mola
ENSXETG00000007088	clp1	95	78.417	ENSMODG00000020107	-	98	77.458	Monodelphis_domestica
ENSXETG00000007088	clp1	95	78.417	ENSMODG00000024148	-	98	77.458	Monodelphis_domestica
ENSXETG00000007088	clp1	100	70.880	ENSMALG00000014239	clp1	100	70.655	Monopterus_albus
ENSXETG00000007088	clp1	95	78.177	MGP_CAROLIEiJ_G0023726	Clp1	98	77.458	Mus_caroli
ENSXETG00000007088	clp1	95	78.177	ENSMUSG00000027079	Clp1	98	77.458	Mus_musculus
ENSXETG00000007088	clp1	95	78.177	MGP_PahariEiJ_G0025177	Clp1	98	77.458	Mus_pahari
ENSXETG00000007088	clp1	95	78.177	MGP_SPRETEiJ_G0024646	Clp1	98	77.458	Mus_spretus
ENSXETG00000007088	clp1	95	78.417	ENSMPUG00000000268	CLP1	98	77.698	Mustela_putorius_furo
ENSXETG00000007088	clp1	95	78.897	ENSMLUG00000007904	CLP1	98	78.177	Myotis_lucifugus
ENSXETG00000007088	clp1	95	78.177	ENSNGAG00000006165	Clp1	98	77.458	Nannospalax_galili
ENSXETG00000007088	clp1	100	69.977	ENSNBRG00000005225	clp1	100	69.752	Neolamprologus_brichardi
ENSXETG00000007088	clp1	73	77.778	ENSNLEG00000012809	-	99	77.533	Nomascus_leucogenys
ENSXETG00000007088	clp1	95	78.657	ENSMEUG00000010949	CLP1	97	77.698	Notamacropus_eugenii
ENSXETG00000007088	clp1	69	82.000	ENSOPRG00000007329	CLP1	100	81.000	Ochotona_princeps
ENSXETG00000007088	clp1	95	78.657	ENSODEG00000011410	CLP1	98	77.938	Octodon_degus
ENSXETG00000007088	clp1	100	69.752	ENSONIG00000005089	clp1	100	69.526	Oreochromis_niloticus
ENSXETG00000007088	clp1	95	78.417	ENSOCUG00000007045	CLP1	98	77.698	Oryctolagus_cuniculus
ENSXETG00000007088	clp1	100	70.880	ENSORLG00000003647	clp1	100	69.977	Oryzias_latipes
ENSXETG00000007088	clp1	100	70.880	ENSORLG00020016676	clp1	100	69.977	Oryzias_latipes_hni
ENSXETG00000007088	clp1	100	70.880	ENSORLG00015019484	clp1	100	69.977	Oryzias_latipes_hsok
ENSXETG00000007088	clp1	100	70.880	ENSOMEG00000021303	clp1	100	69.977	Oryzias_melastigma
ENSXETG00000007088	clp1	95	78.417	ENSOGAG00000004508	CLP1	99	76.402	Otolemur_garnettii
ENSXETG00000007088	clp1	95	77.458	ENSOARG00000010145	CLP1	96	76.499	Ovis_aries
ENSXETG00000007088	clp1	95	78.657	ENSPPAG00000041519	CLP1	98	77.938	Pan_paniscus
ENSXETG00000007088	clp1	95	78.417	ENSPPRG00000006135	CLP1	99	76.402	Panthera_pardus
ENSXETG00000007088	clp1	95	78.417	ENSPTIG00000015866	CLP1	99	76.402	Panthera_tigris_altaica
ENSXETG00000007088	clp1	95	78.657	ENSPTRG00000047318	CLP1	98	77.938	Pan_troglodytes
ENSXETG00000007088	clp1	100	76.201	ENSPANG00000017078	CLP1	99	75.515	Papio_anubis
ENSXETG00000007088	clp1	95	75.422	ENSPKIG00000007697	clp1	95	74.224	Paramormyrops_kingsleyae
ENSXETG00000007088	clp1	89	76.982	ENSPSIG00000005468	CLP1	97	75.959	Pelodiscus_sinensis
ENSXETG00000007088	clp1	100	71.106	ENSPMGG00000012171	clp1	100	70.880	Periophthalmus_magnuspinnatus
ENSXETG00000007088	clp1	95	78.417	ENSPEMG00000011213	-	98	77.698	Peromyscus_maniculatus_bairdii
ENSXETG00000007088	clp1	95	67.703	ENSPMAG00000006707	clp1	98	67.225	Petromyzon_marinus
ENSXETG00000007088	clp1	95	78.417	ENSPCIG00000011899	CLP1	97	77.458	Phascolarctos_cinereus
ENSXETG00000007088	clp1	97	72.286	ENSPFOG00000008169	clp1	98	72.055	Poecilia_formosa
ENSXETG00000007088	clp1	97	72.791	ENSPLAG00000022388	clp1	99	72.558	Poecilia_latipinna
ENSXETG00000007088	clp1	97	72.791	ENSPMEG00000021088	clp1	99	72.558	Poecilia_mexicana
ENSXETG00000007088	clp1	97	72.286	ENSPREG00000017802	clp1	98	72.055	Poecilia_reticulata
ENSXETG00000007088	clp1	52	78.761	ENSPPYG00000003266	-	100	77.434	Pongo_abelii
ENSXETG00000007088	clp1	95	78.417	ENSPCOG00000000360	CLP1	96	77.698	Propithecus_coquereli
ENSXETG00000007088	clp1	95	78.417	ENSPVAG00000016270	CLP1	98	77.698	Pteropus_vampyrus
ENSXETG00000007088	clp1	100	70.203	ENSPNYG00000017274	clp1	99	69.977	Pundamilia_nyererei
ENSXETG00000007088	clp1	95	73.810	ENSPNAG00000026460	clp1	100	70.628	Pygocentrus_nattereri
ENSXETG00000007088	clp1	95	78.177	ENSRNOG00000007416	Clp1	98	77.458	Rattus_norvegicus
ENSXETG00000007088	clp1	95	78.657	ENSRBIG00000018191	CLP1	98	77.938	Rhinopithecus_bieti
ENSXETG00000007088	clp1	95	78.657	ENSRROG00000039265	CLP1	98	77.938	Rhinopithecus_roxellana
ENSXETG00000007088	clp1	93	62.745	ENSSBOG00000010558	-	93	62.745	Saimiri_boliviensis_boliviensis
ENSXETG00000007088	clp1	95	78.657	ENSSBOG00000032517	-	98	77.938	Saimiri_boliviensis_boliviensis
ENSXETG00000007088	clp1	95	78.657	ENSSHAG00000015695	CLP1	98	77.698	Sarcophilus_harrisii
ENSXETG00000007088	clp1	95	74.353	ENSSFOG00015000628	clp1	99	72.311	Scleropages_formosus
ENSXETG00000007088	clp1	100	70.429	ENSSMAG00000019423	clp1	99	70.203	Scophthalmus_maximus
ENSXETG00000007088	clp1	99	71.493	ENSSDUG00000014495	clp1	98	71.267	Seriola_dumerili
ENSXETG00000007088	clp1	99	71.493	ENSSLDG00000000937	clp1	98	71.267	Seriola_lalandi_dorsalis
ENSXETG00000007088	clp1	51	79.111	ENSSARG00000002459	CLP1	100	77.778	Sorex_araneus
ENSXETG00000007088	clp1	95	78.744	ENSSPUG00000016811	CLP1	97	77.778	Sphenodon_punctatus
ENSXETG00000007088	clp1	95	72.986	ENSSPAG00000016052	clp1	96	72.749	Stegastes_partitus
ENSXETG00000007088	clp1	95	78.417	ENSSSCG00000031442	CLP1	98	77.698	Sus_scrofa
ENSXETG00000007088	clp1	95	78.986	ENSTGUG00000007002	CLP1	97	78.502	Taeniopygia_guttata
ENSXETG00000007088	clp1	99	71.364	ENSTRUG00000012602	clp1	98	70.909	Takifugu_rubripes
ENSXETG00000007088	clp1	100	70.975	ENSTNIG00000013125	clp1	100	70.522	Tetraodon_nigroviridis
ENSXETG00000007088	clp1	95	77.458	ENSTBEG00000009975	CLP1	98	76.739	Tupaia_belangeri
ENSXETG00000007088	clp1	95	78.177	ENSTTRG00000002096	CLP1	98	77.458	Tursiops_truncatus
ENSXETG00000007088	clp1	95	78.417	ENSUAMG00000011388	CLP1	98	77.698	Ursus_americanus
ENSXETG00000007088	clp1	95	78.417	ENSUMAG00000018317	CLP1	98	77.698	Ursus_maritimus
ENSXETG00000007088	clp1	100	75.973	ENSVVUG00000017138	CLP1	99	75.286	Vulpes_vulpes
ENSXETG00000007088	clp1	97	72.286	ENSXCOG00000002287	clp1	98	72.055	Xiphophorus_couchianus
ENSXETG00000007088	clp1	97	72.286	ENSXMAG00000009783	clp1	98	72.055	Xiphophorus_maculatus