EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000007184 (Gene tree)
Gene ID: -
Gene Symbol: rpusd1
Alias: -
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 4306 bases
Position: chrGL172810.1:1454750-1459055
Accession: XB-GENE-953402
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000015611	PseudoU_synth_2	PF00849.22	2.4e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000015611	-	923	-	ENSXETP00000015611	302 (aa)	-	F6RAK7

Gene Model

Click here to download ENSXETG00000007184's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000007184's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000007184	rpusd1	100	60.256	ENSG00000007376	RPUSD1	92	78.652	Homo_sapiens
ENSXETG00000007184	rpusd1	98	62.126	ENSAPOG00000022221	rpusd1	98	62.791	Acanthochromis_polyacanthus
ENSXETG00000007184	rpusd1	100	62.829	ENSAMEG00000007461	RPUSD1	100	62.829	Ailuropoda_melanoleuca
ENSXETG00000007184	rpusd1	98	60.984	ENSACIG00000015863	rpusd1	98	62.623	Amphilophus_citrinellus
ENSXETG00000007184	rpusd1	98	61.513	ENSAOCG00000021975	rpusd1	95	62.829	Amphiprion_ocellaris
ENSXETG00000007184	rpusd1	98	61.842	ENSAPEG00000001316	rpusd1	95	63.158	Amphiprion_percula
ENSXETG00000007184	rpusd1	98	61.513	ENSATEG00000002984	rpusd1	98	63.158	Anabas_testudineus
ENSXETG00000007184	rpusd1	77	65.000	ENSAPLG00000012316	RPUSD1	99	65.000	Anas_platyrhynchos
ENSXETG00000007184	rpusd1	99	68.000	ENSACAG00000008953	RPUSD1	100	68.000	Anolis_carolinensis
ENSXETG00000007184	rpusd1	100	60.256	ENSANAG00000024709	RPUSD1	100	60.577	Aotus_nancymaae
ENSXETG00000007184	rpusd1	98	60.772	ENSACLG00000013692	rpusd1	98	62.745	Astatotilapia_calliptera
ENSXETG00000007184	rpusd1	99	62.207	ENSAMXG00000019802	rpusd1	100	62.207	Astyanax_mexicanus
ENSXETG00000007184	rpusd1	100	62.300	ENSBTAG00000000179	RPUSD1	100	62.662	Bos_taurus
ENSXETG00000007184	rpusd1	100	60.577	ENSCJAG00000012253	RPUSD1	100	60.897	Callithrix_jacchus
ENSXETG00000007184	rpusd1	100	61.513	ENSCAFG00000019614	RPUSD1	100	61.513	Canis_familiaris
ENSXETG00000007184	rpusd1	100	61.513	ENSCAFG00020008891	RPUSD1	100	61.513	Canis_lupus_dingo
ENSXETG00000007184	rpusd1	100	61.709	ENSCHIG00000012872	RPUSD1	100	62.903	Capra_hircus
ENSXETG00000007184	rpusd1	99	60.596	ENSTSYG00000036934	RPUSD1	83	77.064	Carlito_syrichta
ENSXETG00000007184	rpusd1	100	59.804	ENSCAPG00000014219	RPUSD1	100	59.804	Cavia_aperea
ENSXETG00000007184	rpusd1	100	59.804	ENSCPOG00000034604	RPUSD1	100	59.804	Cavia_porcellus
ENSXETG00000007184	rpusd1	100	60.577	ENSCCAG00000034385	RPUSD1	100	60.577	Cebus_capucinus
ENSXETG00000007184	rpusd1	100	60.256	ENSCATG00000042983	RPUSD1	83	77.982	Cercocebus_atys
ENSXETG00000007184	rpusd1	100	59.477	ENSCLAG00000013966	RPUSD1	100	59.477	Chinchilla_lanigera
ENSXETG00000007184	rpusd1	100	59.936	ENSCSAG00000012121	RPUSD1	100	60.577	Chlorocebus_sabaeus
ENSXETG00000007184	rpusd1	99	71.854	ENSCPBG00000021101	RPUSD1	99	71.854	Chrysemys_picta_bellii
ENSXETG00000007184	rpusd1	87	65.660	ENSCANG00000028576	RPUSD1	83	77.982	Colobus_angolensis_palliatus
ENSXETG00000007184	rpusd1	100	62.829	ENSCGRG00001014253	Rpusd1	100	62.829	Cricetulus_griseus_chok1gshd
ENSXETG00000007184	rpusd1	100	62.829	ENSCGRG00000017995	Rpusd1	100	62.829	Cricetulus_griseus_crigri
ENSXETG00000007184	rpusd1	99	61.462	ENSCSEG00000018512	rpusd1	100	61.462	Cynoglossus_semilaevis
ENSXETG00000007184	rpusd1	98	63.333	ENSCVAG00000022746	rpusd1	98	63.333	Cyprinodon_variegatus
ENSXETG00000007184	rpusd1	99	67.333	ENSDARG00000060192	rpusd1	100	67.333	Danio_rerio
ENSXETG00000007184	rpusd1	100	60.714	ENSDNOG00000003721	RPUSD1	100	60.714	Dasypus_novemcinctus
ENSXETG00000007184	rpusd1	100	62.171	ENSDORG00000026656	Rpusd1	100	61.842	Dipodomys_ordii
ENSXETG00000007184	rpusd1	97	48.701	ENSEBUG00000008767	rpusd1	93	48.701	Eptatretus_burgeri
ENSXETG00000007184	rpusd1	100	59.810	ENSEASG00005018421	RPUSD1	76	60.127	Equus_asinus_asinus
ENSXETG00000007184	rpusd1	98	60.784	ENSELUG00000014307	rpusd1	88	60.197	Esox_lucius
ENSXETG00000007184	rpusd1	100	61.513	ENSFCAG00000010359	RPUSD1	100	61.513	Felis_catus
ENSXETG00000007184	rpusd1	99	70.667	ENSFALG00000003211	RPUSD1	100	70.667	Ficedula_albicollis
ENSXETG00000007184	rpusd1	100	59.477	ENSFDAG00000013398	RPUSD1	100	59.477	Fukomys_damarensis
ENSXETG00000007184	rpusd1	98	61.589	ENSFHEG00000004736	rpusd1	98	62.583	Fundulus_heteroclitus
ENSXETG00000007184	rpusd1	99	60.656	ENSGMOG00000010756	rpusd1	99	60.984	Gadus_morhua
ENSXETG00000007184	rpusd1	99	69.967	ENSGALG00000005315	RPUSD1	100	69.967	Gallus_gallus
ENSXETG00000007184	rpusd1	98	63.545	ENSGAFG00000009886	rpusd1	98	63.545	Gambusia_affinis
ENSXETG00000007184	rpusd1	97	61.238	ENSGACG00000014276	rpusd1	97	62.791	Gasterosteus_aculeatus
ENSXETG00000007184	rpusd1	99	71.192	ENSGAGG00000004181	RPUSD1	99	71.192	Gopherus_agassizii
ENSXETG00000007184	rpusd1	100	60.577	ENSGGOG00000013997	RPUSD1	100	61.218	Gorilla_gorilla
ENSXETG00000007184	rpusd1	98	61.093	ENSHBUG00000023728	rpusd1	98	63.072	Haplochromis_burtoni
ENSXETG00000007184	rpusd1	100	59.477	ENSHGLG00000002595	RPUSD1	100	59.477	Heterocephalus_glaber_female
ENSXETG00000007184	rpusd1	100	59.477	ENSHGLG00100014303	RPUSD1	100	59.477	Heterocephalus_glaber_male
ENSXETG00000007184	rpusd1	98	64.310	ENSHCOG00000002390	rpusd1	99	64.310	Hippocampus_comes
ENSXETG00000007184	rpusd1	99	65.449	ENSIPUG00000001570	rpusd1	99	66.113	Ictalurus_punctatus
ENSXETG00000007184	rpusd1	100	62.092	ENSSTOG00000004276	RPUSD1	100	62.092	Ictidomys_tridecemlineatus
ENSXETG00000007184	rpusd1	100	61.842	ENSJJAG00000015696	Rpusd1	100	61.842	Jaculus_jaculus
ENSXETG00000007184	rpusd1	98	61.538	ENSKMAG00000017287	rpusd1	98	62.207	Kryptolebias_marmoratus
ENSXETG00000007184	rpusd1	98	61.842	ENSLBEG00000013354	RPUSD1	98	61.842	Labrus_bergylta
ENSXETG00000007184	rpusd1	98	61.842	ENSLBEG00000022502	rpusd1	98	61.842	Labrus_bergylta
ENSXETG00000007184	rpusd1	99	70.000	ENSLACG00000008869	RPUSD1	99	70.000	Latimeria_chalumnae
ENSXETG00000007184	rpusd1	71	77.103	ENSLOCG00000005682	rpusd1	99	77.103	Lepisosteus_oculatus
ENSXETG00000007184	rpusd1	100	61.184	ENSLAFG00000002115	RPUSD1	100	61.184	Loxodonta_africana
ENSXETG00000007184	rpusd1	100	60.256	ENSMFAG00000003961	RPUSD1	83	77.982	Macaca_fascicularis
ENSXETG00000007184	rpusd1	100	60.256	ENSMMUG00000000842	RPUSD1	83	77.982	Macaca_mulatta
ENSXETG00000007184	rpusd1	100	60.256	ENSMNEG00000042712	RPUSD1	83	77.982	Macaca_nemestrina
ENSXETG00000007184	rpusd1	100	60.256	ENSMLEG00000030591	RPUSD1	83	77.982	Mandrillus_leucophaeus
ENSXETG00000007184	rpusd1	98	62.295	ENSMAMG00000004735	rpusd1	98	62.623	Mastacembelus_armatus
ENSXETG00000007184	rpusd1	98	60.772	ENSMZEG00005003214	rpusd1	98	62.745	Maylandia_zebra
ENSXETG00000007184	rpusd1	96	69.492	ENSMGAG00000005447	RPUSD1	99	69.492	Meleagris_gallopavo
ENSXETG00000007184	rpusd1	83	62.598	ENSMAUG00000019998	Rpusd1	97	62.598	Mesocricetus_auratus
ENSXETG00000007184	rpusd1	100	60.586	ENSMICG00000017561	RPUSD1	83	77.982	Microcebus_murinus
ENSXETG00000007184	rpusd1	100	61.093	ENSMOCG00000014082	Rpusd1	100	61.438	Microtus_ochrogaster
ENSXETG00000007184	rpusd1	98	60.943	ENSMMOG00000012569	rpusd1	99	61.953	Mola_mola
ENSXETG00000007184	rpusd1	100	67.732	ENSMODG00000016882	RPUSD1	100	67.732	Monodelphis_domestica
ENSXETG00000007184	rpusd1	98	60.984	ENSMALG00000017818	rpusd1	98	62.418	Monopterus_albus
ENSXETG00000007184	rpusd1	100	60.510	MGP_CAROLIEiJ_G0021244	Rpusd1	100	61.111	Mus_caroli
ENSXETG00000007184	rpusd1	100	60.191	ENSMUSG00000041199	Rpusd1	100	61.111	Mus_musculus
ENSXETG00000007184	rpusd1	100	60.390	MGP_PahariEiJ_G0023562	Rpusd1	100	60.390	Mus_pahari
ENSXETG00000007184	rpusd1	100	60.191	MGP_SPRETEiJ_G0022155	Rpusd1	100	61.111	Mus_spretus
ENSXETG00000007184	rpusd1	100	60.526	ENSMPUG00000015897	RPUSD1	100	60.526	Mustela_putorius_furo
ENSXETG00000007184	rpusd1	100	60.952	ENSMLUG00000001089	RPUSD1	100	60.952	Myotis_lucifugus
ENSXETG00000007184	rpusd1	100	59.554	ENSNGAG00000003595	Rpusd1	100	60.518	Nannospalax_galili
ENSXETG00000007184	rpusd1	98	65.657	ENSNBRG00000006457	rpusd1	98	65.657	Neolamprologus_brichardi
ENSXETG00000007184	rpusd1	55	52.000	ENSNLEG00000008424	-	100	52.000	Nomascus_leucogenys
ENSXETG00000007184	rpusd1	100	68.078	ENSMEUG00000016049	RPUSD1	100	68.078	Notamacropus_eugenii
ENSXETG00000007184	rpusd1	99	57.616	ENSOPRG00000008340	RPUSD1	99	57.616	Ochotona_princeps
ENSXETG00000007184	rpusd1	100	59.477	ENSODEG00000016945	RPUSD1	100	59.477	Octodon_degus
ENSXETG00000007184	rpusd1	98	60.323	ENSONIG00000015672	rpusd1	99	62.623	Oreochromis_niloticus
ENSXETG00000007184	rpusd1	99	64.333	ENSORLG00000013009	rpusd1	99	64.333	Oryzias_latipes
ENSXETG00000007184	rpusd1	99	64.000	ENSORLG00020010382	rpusd1	99	64.000	Oryzias_latipes_hni
ENSXETG00000007184	rpusd1	99	63.667	ENSORLG00015021354	rpusd1	99	63.667	Oryzias_latipes_hsok
ENSXETG00000007184	rpusd1	98	63.423	ENSOMEG00000021426	rpusd1	98	63.423	Oryzias_melastigma
ENSXETG00000007184	rpusd1	100	59.936	ENSOGAG00000003795	RPUSD1	100	60.897	Otolemur_garnettii
ENSXETG00000007184	rpusd1	100	62.338	ENSOARG00000014254	RPUSD1	100	62.662	Ovis_aries
ENSXETG00000007184	rpusd1	100	59.936	ENSPPAG00000034797	RPUSD1	83	77.982	Pan_paniscus
ENSXETG00000007184	rpusd1	100	62.500	ENSPPRG00000012389	RPUSD1	100	62.500	Panthera_pardus
ENSXETG00000007184	rpusd1	100	61.842	ENSPTIG00000008545	RPUSD1	83	74.312	Panthera_tigris_altaica
ENSXETG00000007184	rpusd1	100	59.936	ENSPTRG00000007565	RPUSD1	83	77.982	Pan_troglodytes
ENSXETG00000007184	rpusd1	100	59.936	ENSPANG00000024401	RPUSD1	83	77.982	Papio_anubis
ENSXETG00000007184	rpusd1	99	66.885	ENSPKIG00000018890	rpusd1	91	66.885	Paramormyrops_kingsleyae
ENSXETG00000007184	rpusd1	99	71.287	ENSPSIG00000013945	RPUSD1	100	71.287	Pelodiscus_sinensis
ENSXETG00000007184	rpusd1	98	62.034	ENSPMGG00000014950	rpusd1	98	62.034	Periophthalmus_magnuspinnatus
ENSXETG00000007184	rpusd1	100	61.765	ENSPEMG00000000497	Rpusd1	100	61.765	Peromyscus_maniculatus_bairdii
ENSXETG00000007184	rpusd1	98	53.947	ENSPMAG00000001563	rpusd1	99	54.636	Petromyzon_marinus
ENSXETG00000007184	rpusd1	100	70.297	ENSPCIG00000021216	-	94	70.297	Phascolarctos_cinereus
ENSXETG00000007184	rpusd1	98	64.430	ENSPFOG00000007946	rpusd1	98	64.430	Poecilia_formosa
ENSXETG00000007184	rpusd1	98	64.430	ENSPLAG00000011925	rpusd1	98	64.430	Poecilia_latipinna
ENSXETG00000007184	rpusd1	98	64.430	ENSPMEG00000002910	rpusd1	98	64.430	Poecilia_mexicana
ENSXETG00000007184	rpusd1	98	64.883	ENSPREG00000019851	rpusd1	98	64.883	Poecilia_reticulata
ENSXETG00000007184	rpusd1	100	49.191	ENSPCAG00000002258	RPUSD1	100	49.191	Procavia_capensis
ENSXETG00000007184	rpusd1	100	59.295	ENSPCOG00000022582	RPUSD1	100	59.615	Propithecus_coquereli
ENSXETG00000007184	rpusd1	100	57.729	ENSPVAG00000013104	RPUSD1	100	58.333	Pteropus_vampyrus
ENSXETG00000007184	rpusd1	98	63.851	ENSPNYG00000024076	rpusd1	98	64.527	Pundamilia_nyererei
ENSXETG00000007184	rpusd1	99	61.204	ENSPNAG00000013806	rpusd1	100	61.204	Pygocentrus_nattereri
ENSXETG00000007184	rpusd1	100	61.438	ENSRNOG00000023639	Rpusd1	100	61.438	Rattus_norvegicus
ENSXETG00000007184	rpusd1	100	59.936	ENSRBIG00000030238	RPUSD1	83	77.982	Rhinopithecus_bieti
ENSXETG00000007184	rpusd1	100	59.936	ENSRROG00000036663	RPUSD1	83	77.982	Rhinopithecus_roxellana
ENSXETG00000007184	rpusd1	100	61.184	ENSSBOG00000033063	RPUSD1	100	61.513	Saimiri_boliviensis_boliviensis
ENSXETG00000007184	rpusd1	100	70.358	ENSSHAG00000013500	RPUSD1	100	70.358	Sarcophilus_harrisii
ENSXETG00000007184	rpusd1	99	68.227	ENSSFOG00015014394	rpusd1	99	68.227	Scleropages_formosus
ENSXETG00000007184	rpusd1	98	62.500	ENSSMAG00000008045	rpusd1	91	63.487	Scophthalmus_maximus
ENSXETG00000007184	rpusd1	83	69.721	ENSSDUG00000001829	rpusd1	95	63.487	Seriola_dumerili
ENSXETG00000007184	rpusd1	83	69.721	ENSSLDG00000020853	rpusd1	95	63.487	Seriola_lalandi_dorsalis
ENSXETG00000007184	rpusd1	55	70.060	ENSSARG00000011187	-	100	70.060	Sorex_araneus
ENSXETG00000007184	rpusd1	62	62.632	ENSSPUG00000005119	-	100	62.632	Sphenodon_punctatus
ENSXETG00000007184	rpusd1	98	62.418	ENSSPAG00000012708	rpusd1	98	63.487	Stegastes_partitus
ENSXETG00000007184	rpusd1	100	60.897	ENSSSCG00000008000	RPUSD1	94	69.672	Sus_scrofa
ENSXETG00000007184	rpusd1	83	76.190	ENSTGUG00000015375	RPUSD1	99	76.190	Taeniopygia_guttata
ENSXETG00000007184	rpusd1	98	60.855	ENSTRUG00000003041	rpusd1	98	61.967	Takifugu_rubripes
ENSXETG00000007184	rpusd1	98	59.122	ENSTNIG00000002660	rpusd1	99	59.122	Tetraodon_nigroviridis
ENSXETG00000007184	rpusd1	100	60.897	ENSTTRG00000010167	RPUSD1	100	61.218	Tursiops_truncatus
ENSXETG00000007184	rpusd1	100	61.184	ENSUAMG00000012736	RPUSD1	100	62.500	Ursus_americanus
ENSXETG00000007184	rpusd1	100	61.842	ENSUMAG00000021174	RPUSD1	100	61.842	Ursus_maritimus
ENSXETG00000007184	rpusd1	100	62.500	ENSVVUG00000012357	RPUSD1	100	62.500	Vulpes_vulpes
ENSXETG00000007184	rpusd1	98	62.542	ENSXCOG00000017930	rpusd1	98	62.542	Xiphophorus_couchianus
ENSXETG00000007184	rpusd1	98	62.876	ENSXMAG00000024084	rpusd1	98	62.876	Xiphophorus_maculatus