EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000007251 (Gene tree)
Gene ID: -
Gene Symbol: zmat3
Alias: -
Full Name: Xenopus tropicalis zinc finger matrin-type 3 (zmat3)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 33917 bases
Position: chrGL172639.1:7044308-7078224
Accession: NM_001017144
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000015753	zf-met	PF12874.7	5.6e-22	1	3
ENSXETP00000015753	zf-met	PF12874.7	5.6e-22	2	3
ENSXETP00000015753	zf-met	PF12874.7	5.6e-22	3	3
ENSXETP00000015753	zf-C2H2_jaz	PF12171.8	5.4e-19	1	3
ENSXETP00000015753	zf-C2H2_jaz	PF12171.8	5.4e-19	2	3
ENSXETP00000015753	zf-C2H2_jaz	PF12171.8	5.4e-19	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000015753	-	1455	-	ENSXETP00000015753	291 (aa)	XP_012818508	F6VXG8

Gene Model

Click here to download ENSXETG00000007251's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000007251's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000007251	zmat3	70	31.288	ENSXETG00000013525	zmat4	93	31.361

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000007251	zmat3	84	73.684	ENSG00000172667	ZMAT3	100	66.330	Homo_sapiens
ENSXETG00000007251	zmat3	86	58.491	ENSAPOG00000015037	zmat3	94	55.986	Acanthochromis_polyacanthus
ENSXETG00000007251	zmat3	100	65.986	ENSAMEG00000010742	ZMAT3	100	65.986	Ailuropoda_melanoleuca
ENSXETG00000007251	zmat3	77	65.333	ENSACIG00000023037	zmat3	75	65.333	Amphilophus_citrinellus
ENSXETG00000007251	zmat3	90	57.246	ENSAOCG00000017955	zmat3	86	57.795	Amphiprion_ocellaris
ENSXETG00000007251	zmat3	99	54.392	ENSAPEG00000014553	zmat3	99	54.392	Amphiprion_percula
ENSXETG00000007251	zmat3	77	63.839	ENSATEG00000022244	zmat3	82	63.839	Anabas_testudineus
ENSXETG00000007251	zmat3	100	70.648	ENSAPLG00000013292	ZMAT3	99	70.648	Anas_platyrhynchos
ENSXETG00000007251	zmat3	84	75.610	ENSACAG00000005005	ZMAT3	99	67.230	Anolis_carolinensis
ENSXETG00000007251	zmat3	95	64.029	ENSANAG00000035673	ZMAT3	96	64.029	Aotus_nancymaae
ENSXETG00000007251	zmat3	86	62.992	ENSACLG00000026272	zmat3	88	62.598	Astatotilapia_calliptera
ENSXETG00000007251	zmat3	96	57.877	ENSAMXG00000009798	zmat3	79	57.877	Astyanax_mexicanus
ENSXETG00000007251	zmat3	84	74.089	ENSBTAG00000012463	ZMAT3	100	65.878	Bos_taurus
ENSXETG00000007251	zmat3	100	65.541	ENSCJAG00000013399	ZMAT3	100	65.541	Callithrix_jacchus
ENSXETG00000007251	zmat3	100	66.327	ENSCAFG00000011081	ZMAT3	100	65.986	Canis_familiaris
ENSXETG00000007251	zmat3	100	66.327	ENSCAFG00020023107	ZMAT3	100	65.986	Canis_lupus_dingo
ENSXETG00000007251	zmat3	84	73.171	ENSCHIG00000025074	ZMAT3	100	65.306	Capra_hircus
ENSXETG00000007251	zmat3	100	65.306	ENSTSYG00000026546	ZMAT3	100	64.966	Carlito_syrichta
ENSXETG00000007251	zmat3	100	66.441	ENSCAPG00000014645	ZMAT3	99	66.441	Cavia_aperea
ENSXETG00000007251	zmat3	100	66.441	ENSCPOG00000003865	ZMAT3	100	66.441	Cavia_porcellus
ENSXETG00000007251	zmat3	100	65.085	ENSCCAG00000036721	ZMAT3	100	65.085	Cebus_capucinus
ENSXETG00000007251	zmat3	100	60.339	ENSCATG00000025137	ZMAT3	100	60.339	Cercocebus_atys
ENSXETG00000007251	zmat3	100	66.667	ENSCLAG00000013464	ZMAT3	100	67.007	Chinchilla_lanigera
ENSXETG00000007251	zmat3	84	73.577	ENSCSAG00000012935	ZMAT3	100	65.986	Chlorocebus_sabaeus
ENSXETG00000007251	zmat3	84	73.577	ENSCHOG00000005591	ZMAT3	85	73.577	Choloepus_hoffmanni
ENSXETG00000007251	zmat3	100	67.458	ENSCPBG00000026917	ZMAT3	99	67.458	Chrysemys_picta_bellii
ENSXETG00000007251	zmat3	84	73.684	ENSCANG00000029476	ZMAT3	100	66.330	Colobus_angolensis_palliatus
ENSXETG00000007251	zmat3	100	64.527	ENSCGRG00001012339	Zmat3	99	64.527	Cricetulus_griseus_chok1gshd
ENSXETG00000007251	zmat3	100	64.527	ENSCGRG00000011491	Zmat3	99	64.527	Cricetulus_griseus_crigri
ENSXETG00000007251	zmat3	96	55.986	ENSCSEG00000019463	zmat3	90	55.986	Cynoglossus_semilaevis
ENSXETG00000007251	zmat3	97	55.245	ENSCVAG00000011847	zmat3	94	55.245	Cyprinodon_variegatus
ENSXETG00000007251	zmat3	81	63.968	ENSDARG00000080021	zmat3	91	56.187	Danio_rerio
ENSXETG00000007251	zmat3	84	74.494	ENSDNOG00000012284	ZMAT3	100	67.003	Dasypus_novemcinctus
ENSXETG00000007251	zmat3	85	72.581	ENSDORG00000011801	Zmat3	86	72.581	Dipodomys_ordii
ENSXETG00000007251	zmat3	95	55.230	ENSETEG00000008883	ZMAT3	100	55.230	Echinops_telfairi
ENSXETG00000007251	zmat3	84	73.171	ENSEASG00005016887	ZMAT3	100	65.085	Equus_asinus_asinus
ENSXETG00000007251	zmat3	84	72.764	ENSECAG00000012784	ZMAT3	100	64.746	Equus_caballus
ENSXETG00000007251	zmat3	100	58.844	ENSEEUG00000001126	ZMAT3	100	58.844	Erinaceus_europaeus
ENSXETG00000007251	zmat3	81	64.372	ENSELUG00000010132	zmat3	68	62.791	Esox_lucius
ENSXETG00000007251	zmat3	100	66.667	ENSFCAG00000014578	ZMAT3	100	66.667	Felis_catus
ENSXETG00000007251	zmat3	100	71.331	ENSFALG00000008403	ZMAT3	99	71.331	Ficedula_albicollis
ENSXETG00000007251	zmat3	100	66.216	ENSFDAG00000013376	ZMAT3	100	66.216	Fukomys_damarensis
ENSXETG00000007251	zmat3	99	55.068	ENSFHEG00000003221	zmat3	99	55.068	Fundulus_heteroclitus
ENSXETG00000007251	zmat3	79	63.793	ENSGMOG00000008558	zmat3	97	63.793	Gadus_morhua
ENSXETG00000007251	zmat3	100	70.990	ENSGALG00000040948	ZMAT3	99	76.336	Gallus_gallus
ENSXETG00000007251	zmat3	51	61.905	ENSGAFG00000010485	zmat3	52	61.486	Gambusia_affinis
ENSXETG00000007251	zmat3	90	55.805	ENSGACG00000006175	zmat3	99	55.805	Gasterosteus_aculeatus
ENSXETG00000007251	zmat3	84	75.918	ENSGAGG00000009275	ZMAT3	84	75.918	Gopherus_agassizii
ENSXETG00000007251	zmat3	84	73.577	ENSGGOG00000009975	ZMAT3	100	66.216	Gorilla_gorilla
ENSXETG00000007251	zmat3	89	59.696	ENSHBUG00000004401	zmat3	92	59.696	Haplochromis_burtoni
ENSXETG00000007251	zmat3	100	66.102	ENSHGLG00000011523	ZMAT3	100	66.102	Heterocephalus_glaber_female
ENSXETG00000007251	zmat3	100	66.102	ENSHGLG00100012235	ZMAT3	100	66.102	Heterocephalus_glaber_male
ENSXETG00000007251	zmat3	77	64.159	ENSHCOG00000010624	zmat3	68	64.159	Hippocampus_comes
ENSXETG00000007251	zmat3	89	60.517	ENSIPUG00000003043	zmat3	86	65.254	Ictalurus_punctatus
ENSXETG00000007251	zmat3	84	73.984	ENSSTOG00000028436	ZMAT3	85	73.984	Ictidomys_tridecemlineatus
ENSXETG00000007251	zmat3	84	73.984	ENSJJAG00000004288	Zmat3	100	66.327	Jaculus_jaculus
ENSXETG00000007251	zmat3	86	58.712	ENSKMAG00000008962	zmat3	91	62.551	Kryptolebias_marmoratus
ENSXETG00000007251	zmat3	86	60.618	ENSLBEG00000001993	zmat3	91	60.618	Labrus_bergylta
ENSXETG00000007251	zmat3	89	64.727	ENSLACG00000015780	ZMAT3	75	64.727	Latimeria_chalumnae
ENSXETG00000007251	zmat3	81	67.742	ENSLOCG00000001108	zmat3	81	60.067	Lepisosteus_oculatus
ENSXETG00000007251	zmat3	84	74.089	ENSLAFG00000000897	ZMAT3	100	66.102	Loxodonta_africana
ENSXETG00000007251	zmat3	84	73.279	ENSMFAG00000021292	ZMAT3	100	65.763	Macaca_fascicularis
ENSXETG00000007251	zmat3	84	73.279	ENSMMUG00000003216	ZMAT3	100	65.763	Macaca_mulatta
ENSXETG00000007251	zmat3	84	73.684	ENSMNEG00000036725	ZMAT3	100	66.102	Macaca_nemestrina
ENSXETG00000007251	zmat3	100	65.986	ENSMLEG00000026279	ZMAT3	100	65.986	Mandrillus_leucophaeus
ENSXETG00000007251	zmat3	90	59.470	ENSMAMG00000012349	zmat3	84	59.470	Mastacembelus_armatus
ENSXETG00000007251	zmat3	90	58.333	ENSMZEG00005015427	zmat3	76	66.667	Maylandia_zebra
ENSXETG00000007251	zmat3	100	70.990	ENSMGAG00000009873	ZMAT3	99	70.990	Meleagris_gallopavo
ENSXETG00000007251	zmat3	100	65.085	ENSMAUG00000001986	Zmat3	99	65.085	Mesocricetus_auratus
ENSXETG00000007251	zmat3	100	66.780	ENSMICG00000049501	ZMAT3	100	66.667	Microcebus_murinus
ENSXETG00000007251	zmat3	100	66.102	ENSMOCG00000018844	Zmat3	100	66.102	Microtus_ochrogaster
ENSXETG00000007251	zmat3	90	58.712	ENSMMOG00000001603	zmat3	90	55.822	Mola_mola
ENSXETG00000007251	zmat3	96	63.121	ENSMODG00000021308	ZMAT3	94	63.121	Monodelphis_domestica
ENSXETG00000007251	zmat3	97	57.639	ENSMALG00000019683	zmat3	95	57.639	Monopterus_albus
ENSXETG00000007251	zmat3	84	71.660	MGP_CAROLIEiJ_G0024914	Zmat3	85	71.660	Mus_caroli
ENSXETG00000007251	zmat3	84	71.255	ENSMUSG00000027663	Zmat3	85	71.255	Mus_musculus
ENSXETG00000007251	zmat3	84	70.565	MGP_PahariEiJ_G0026359	Zmat3	85	70.565	Mus_pahari
ENSXETG00000007251	zmat3	84	71.255	MGP_SPRETEiJ_G0025848	Zmat3	85	71.255	Mus_spretus
ENSXETG00000007251	zmat3	100	65.529	ENSMPUG00000017206	ZMAT3	100	65.529	Mustela_putorius_furo
ENSXETG00000007251	zmat3	100	65.541	ENSMLUG00000013074	ZMAT3	100	65.541	Myotis_lucifugus
ENSXETG00000007251	zmat3	85	73.494	ENSNGAG00000023602	Zmat3	86	73.494	Nannospalax_galili
ENSXETG00000007251	zmat3	89	59.696	ENSNBRG00000020886	zmat3	92	59.696	Neolamprologus_brichardi
ENSXETG00000007251	zmat3	84	73.684	ENSNLEG00000005658	ZMAT3	100	66.330	Nomascus_leucogenys
ENSXETG00000007251	zmat3	100	63.051	ENSMEUG00000015724	ZMAT3	100	63.051	Notamacropus_eugenii
ENSXETG00000007251	zmat3	100	64.983	ENSODEG00000003313	ZMAT3	100	65.320	Octodon_degus
ENSXETG00000007251	zmat3	92	56.643	ENSONIG00000008388	zmat3	96	56.643	Oreochromis_niloticus
ENSXETG00000007251	zmat3	61	64.444	ENSOANG00000009901	ZMAT3	84	55.310	Ornithorhynchus_anatinus
ENSXETG00000007251	zmat3	89	70.498	ENSOCUG00000004658	ZMAT3	100	65.646	Oryctolagus_cuniculus
ENSXETG00000007251	zmat3	77	63.830	ENSORLG00000011575	zmat3	53	58.779	Oryzias_latipes
ENSXETG00000007251	zmat3	77	64.255	ENSORLG00020005858	zmat3	53	59.160	Oryzias_latipes_hni
ENSXETG00000007251	zmat3	77	64.255	ENSORLG00015003707	zmat3	53	59.160	Oryzias_latipes_hsok
ENSXETG00000007251	zmat3	91	58.303	ENSOMEG00000011303	zmat3	87	58.303	Oryzias_melastigma
ENSXETG00000007251	zmat3	84	74.494	ENSOGAG00000003252	ZMAT3	85	74.494	Otolemur_garnettii
ENSXETG00000007251	zmat3	84	73.279	ENSOARG00000020713	ZMAT3	100	65.424	Ovis_aries
ENSXETG00000007251	zmat3	84	73.684	ENSPPAG00000035483	ZMAT3	100	66.330	Pan_paniscus
ENSXETG00000007251	zmat3	100	66.327	ENSPPRG00000004407	ZMAT3	100	66.327	Panthera_pardus
ENSXETG00000007251	zmat3	100	66.327	ENSPTIG00000009929	ZMAT3	100	66.327	Panthera_tigris_altaica
ENSXETG00000007251	zmat3	84	73.684	ENSPTRG00000015641	ZMAT3	100	66.330	Pan_troglodytes
ENSXETG00000007251	zmat3	100	65.763	ENSPANG00000023167	ZMAT3	100	65.763	Papio_anubis
ENSXETG00000007251	zmat3	81	66.803	ENSPKIG00000023370	zmat3	81	58.763	Paramormyrops_kingsleyae
ENSXETG00000007251	zmat3	84	75.102	ENSPSIG00000014839	ZMAT3	84	75.102	Pelodiscus_sinensis
ENSXETG00000007251	zmat3	78	62.338	ENSPMGG00000023924	zmat3	84	62.338	Periophthalmus_magnuspinnatus
ENSXETG00000007251	zmat3	100	65.085	ENSPEMG00000019154	Zmat3	99	65.085	Peromyscus_maniculatus_bairdii
ENSXETG00000007251	zmat3	86	60.076	ENSPFOG00000019206	zmat3	78	56.040	Poecilia_formosa
ENSXETG00000007251	zmat3	89	60.536	ENSPLAG00000022572	zmat3	92	60.536	Poecilia_latipinna
ENSXETG00000007251	zmat3	82	60.082	ENSPMEG00000004131	-	92	56.818	Poecilia_mexicana
ENSXETG00000007251	zmat3	86	62.846	ENSPREG00000022632	zmat3	92	62.846	Poecilia_reticulata
ENSXETG00000007251	zmat3	84	73.684	ENSPPYG00000014315	ZMAT3	100	66.330	Pongo_abelii
ENSXETG00000007251	zmat3	89	69.697	ENSPCAG00000008585	ZMAT3	100	65.878	Procavia_capensis
ENSXETG00000007251	zmat3	84	74.797	ENSPCOG00000022835	ZMAT3	85	74.797	Propithecus_coquereli
ENSXETG00000007251	zmat3	84	73.279	ENSPVAG00000004489	ZMAT3	85	73.279	Pteropus_vampyrus
ENSXETG00000007251	zmat3	89	59.696	ENSPNYG00000014350	zmat3	92	59.696	Pundamilia_nyererei
ENSXETG00000007251	zmat3	86	61.977	ENSPNAG00000015664	zmat3	71	61.977	Pygocentrus_nattereri
ENSXETG00000007251	zmat3	84	72.358	ENSRNOG00000010119	Zmat3	85	72.358	Rattus_norvegicus
ENSXETG00000007251	zmat3	84	73.684	ENSRBIG00000029622	ZMAT3	100	66.330	Rhinopithecus_bieti
ENSXETG00000007251	zmat3	84	73.684	ENSRROG00000038345	ZMAT3	100	66.330	Rhinopithecus_roxellana
ENSXETG00000007251	zmat3	85	71.315	ENSSBOG00000033332	ZMAT3	100	65.203	Saimiri_boliviensis_boliviensis
ENSXETG00000007251	zmat3	100	62.712	ENSSHAG00000016154	ZMAT3	100	62.712	Sarcophilus_harrisii
ENSXETG00000007251	zmat3	99	56.410	ENSSFOG00015006984	zmat3	98	59.655	Scleropages_formosus
ENSXETG00000007251	zmat3	89	57.353	ENSSMAG00000019540	-	67	52.751	Scophthalmus_maximus
ENSXETG00000007251	zmat3	90	58.889	ENSSDUG00000016188	zmat3	90	55.518	Seriola_dumerili
ENSXETG00000007251	zmat3	90	58.889	ENSSLDG00000018611	zmat3	90	55.518	Seriola_lalandi_dorsalis
ENSXETG00000007251	zmat3	60	64.972	ENSSARG00000004901	ZMAT3	100	56.889	Sorex_araneus
ENSXETG00000007251	zmat3	86	73.123	ENSSPUG00000014753	ZMAT3	89	73.123	Sphenodon_punctatus
ENSXETG00000007251	zmat3	90	57.836	ENSSPAG00000011062	zmat3	92	54.730	Stegastes_partitus
ENSXETG00000007251	zmat3	100	65.320	ENSSSCG00000033860	ZMAT3	100	65.320	Sus_scrofa
ENSXETG00000007251	zmat3	100	70.990	ENSTGUG00000010765	-	99	70.990	Taeniopygia_guttata
ENSXETG00000007251	zmat3	78	63.319	ENSTRUG00000004788	zmat3	96	54.386	Takifugu_rubripes
ENSXETG00000007251	zmat3	86	58.462	ENSTNIG00000006781	zmat3	92	58.462	Tetraodon_nigroviridis
ENSXETG00000007251	zmat3	54	82.390	ENSTBEG00000012359	ZMAT3	100	82.390	Tupaia_belangeri
ENSXETG00000007251	zmat3	84	71.255	ENSTTRG00000004923	ZMAT3	100	64.068	Tursiops_truncatus
ENSXETG00000007251	zmat3	100	65.306	ENSUAMG00000007623	ZMAT3	100	65.306	Ursus_americanus
ENSXETG00000007251	zmat3	100	65.529	ENSUMAG00000007847	ZMAT3	100	65.529	Ursus_maritimus
ENSXETG00000007251	zmat3	84	72.874	ENSVPAG00000006611	ZMAT3	100	65.203	Vicugna_pacos
ENSXETG00000007251	zmat3	100	66.327	ENSVVUG00000004729	ZMAT3	100	65.986	Vulpes_vulpes
ENSXETG00000007251	zmat3	86	62.698	ENSXCOG00000008397	zmat3	91	62.698	Xiphophorus_couchianus
ENSXETG00000007251	zmat3	86	60.456	ENSXMAG00000015188	zmat3	63	56.040	Xiphophorus_maculatus