EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000007283 (Gene tree)
Gene ID: -
Gene Symbol: larp4
Alias: -
Full Name: Xenopus tropicalis La ribonucleoprotein domain family member 4 (larp4)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 11395 bases
Position: chrGL172703.1:2846172-2857566
Accession: NM_001142236
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000015834	La	PF05383.17	1.6e-17	1	1
ENSXETP00000036777	La	PF05383.17	1.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000036777	-	2213	-	ENSXETP00000036777	681 (aa)	-	F6U5V9
ENSXETT00000015834	-	2213	-	ENSXETP00000015834	681 (aa)	-	F7BGY0

Gene Model

Click here to download ENSXETG00000007283's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000007283's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000007283	larp4	94	39.334	ENSXETG00000016882	larp4b	80	40.093

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000007283	larp4	92	67.782	ENSG00000161813	LARP4	97	73.936	Homo_sapiens
ENSXETG00000007283	larp4	94	47.189	ENSAPOG00000021331	larp4ab	89	46.598	Acanthochromis_polyacanthus
ENSXETG00000007283	larp4	100	49.254	ENSAPOG00000007142	larp4aa	90	49.459	Acanthochromis_polyacanthus
ENSXETG00000007283	larp4	100	60.719	ENSAMEG00000001275	LARP4	93	60.663	Ailuropoda_melanoleuca
ENSXETG00000007283	larp4	95	50.000	ENSACIG00000001198	larp4aa	78	84.397	Amphilophus_citrinellus
ENSXETG00000007283	larp4	94	47.067	ENSAOCG00000006387	larp4ab	89	46.903	Amphiprion_ocellaris
ENSXETG00000007283	larp4	100	49.319	ENSAOCG00000002408	larp4aa	90	49.933	Amphiprion_ocellaris
ENSXETG00000007283	larp4	100	49.183	ENSAPEG00000019058	larp4aa	90	49.800	Amphiprion_percula
ENSXETG00000007283	larp4	100	50.000	ENSATEG00000020715	larp4aa	86	51.425	Anabas_testudineus
ENSXETG00000007283	larp4	95	44.526	ENSATEG00000001018	larp4ab	90	44.234	Anabas_testudineus
ENSXETG00000007283	larp4	100	66.812	ENSAPLG00000013661	LARP4	92	66.812	Anas_platyrhynchos
ENSXETG00000007283	larp4	100	64.928	ENSACAG00000017133	LARP4	90	64.783	Anolis_carolinensis
ENSXETG00000007283	larp4	92	66.946	ENSANAG00000029342	LARP4	87	72.615	Aotus_nancymaae
ENSXETG00000007283	larp4	91	53.073	ENSAMXG00000036493	larp4aa	81	54.204	Astyanax_mexicanus
ENSXETG00000007283	larp4	91	48.869	ENSAMXG00000001515	larp4ab	88	47.746	Astyanax_mexicanus
ENSXETG00000007283	larp4	100	58.898	ENSBTAG00000017164	LARP4	92	59.040	Bos_taurus
ENSXETG00000007283	larp4	92	67.364	ENSCJAG00000021131	LARP4	87	72.923	Callithrix_jacchus
ENSXETG00000007283	larp4	100	61.383	ENSCAFG00000008174	LARP4	93	61.328	Canis_familiaris
ENSXETG00000007283	larp4	100	61.383	ENSCAFG00020014554	LARP4	92	68.033	Canis_lupus_dingo
ENSXETG00000007283	larp4	100	59.463	ENSCHIG00000025965	LARP4	93	59.605	Capra_hircus
ENSXETG00000007283	larp4	91	70.306	ENSTSYG00000004342	LARP4	86	74.921	Carlito_syrichta
ENSXETG00000007283	larp4	100	47.315	ENSCAPG00000012942	LARP4	93	47.025	Cavia_aperea
ENSXETG00000007283	larp4	100	54.480	ENSCPOG00000020519	LARP4	93	55.925	Cavia_porcellus
ENSXETG00000007283	larp4	87	72.840	ENSCCAG00000024439	LARP4	87	72.923	Cebus_capucinus
ENSXETG00000007283	larp4	100	56.295	ENSCATG00000044528	LARP4	93	56.295	Cercocebus_atys
ENSXETG00000007283	larp4	100	58.790	ENSCLAG00000001829	LARP4	93	60.231	Chinchilla_lanigera
ENSXETG00000007283	larp4	100	66.618	ENSCPBG00000019407	LARP4	84	66.618	Chrysemys_picta_bellii
ENSXETG00000007283	larp4	92	67.782	ENSCANG00000029159	-	87	73.538	Colobus_angolensis_palliatus
ENSXETG00000007283	larp4	100	52.525	ENSCANG00000033097	-	91	60.280	Colobus_angolensis_palliatus
ENSXETG00000007283	larp4	100	59.190	ENSCGRG00001010818	Larp4	93	58.032	Cricetulus_griseus_chok1gshd
ENSXETG00000007283	larp4	100	59.190	ENSCGRG00000009382	Larp4	94	58.032	Cricetulus_griseus_crigri
ENSXETG00000007283	larp4	69	51.844	ENSCSEG00000003240	larp4ab	98	43.289	Cynoglossus_semilaevis
ENSXETG00000007283	larp4	91	51.267	ENSCSEG00000001963	larp4aa	82	51.780	Cynoglossus_semilaevis
ENSXETG00000007283	larp4	99	49.120	ENSCVAG00000005488	larp4aa	91	48.493	Cyprinodon_variegatus
ENSXETG00000007283	larp4	96	48.844	ENSDARG00000074979	larp4ab	80	81.560	Danio_rerio
ENSXETG00000007283	larp4	95	51.149	ENSDARG00000078401	larp4aa	87	51.293	Danio_rerio
ENSXETG00000007283	larp4	100	59.169	ENSDNOG00000038525	LARP4	92	59.169	Dasypus_novemcinctus
ENSXETG00000007283	larp4	100	56.772	ENSDORG00000004013	Larp4	92	58.213	Dipodomys_ordii
ENSXETG00000007283	larp4	57	87.407	ENSETEG00000011683	LARP4	53	87.407	Echinops_telfairi
ENSXETG00000007283	larp4	79	36.991	ENSEBUG00000010394	LARP4	87	37.097	Eptatretus_burgeri
ENSXETG00000007283	larp4	100	58.129	ENSEASG00005004356	LARP4	94	70.792	Equus_asinus_asinus
ENSXETG00000007283	larp4	100	60.432	ENSECAG00000012479	LARP4	99	61.022	Equus_caballus
ENSXETG00000007283	larp4	75	87.179	ENSEEUG00000000316	LARP4	69	87.179	Erinaceus_europaeus
ENSXETG00000007283	larp4	69	76.106	ENSELUG00000018650	larp4ab	84	74.043	Esox_lucius
ENSXETG00000007283	larp4	88	64.535	ENSELUG00000000395	larp4aa	91	48.649	Esox_lucius
ENSXETG00000007283	larp4	100	60.951	ENSFCAG00000031897	LARP4	89	73.231	Felis_catus
ENSXETG00000007283	larp4	85	66.496	ENSFALG00000002114	LARP4	90	66.944	Ficedula_albicollis
ENSXETG00000007283	larp4	100	57.803	ENSFDAG00000006406	-	93	59.249	Fukomys_damarensis
ENSXETG00000007283	larp4	96	44.092	ENSFHEG00000013854	larp4ab	91	43.372	Fundulus_heteroclitus
ENSXETG00000007283	larp4	95	49.167	ENSFHEG00000004338	larp4aa	87	50.348	Fundulus_heteroclitus
ENSXETG00000007283	larp4	95	49.927	ENSGMOG00000008246	larp4aa	86	51.098	Gadus_morhua
ENSXETG00000007283	larp4	95	64.275	ENSGALG00000042122	LARP4	85	64.329	Gallus_gallus
ENSXETG00000007283	larp4	94	45.617	ENSGAFG00000021777	larp4ab	89	44.709	Gambusia_affinis
ENSXETG00000007283	larp4	99	45.710	ENSGACG00000000680	larp4ab	93	45.607	Gasterosteus_aculeatus
ENSXETG00000007283	larp4	95	51.895	ENSGACG00000008381	larp4aa	80	72.109	Gasterosteus_aculeatus
ENSXETG00000007283	larp4	100	66.087	ENSGAGG00000006969	LARP4	92	65.942	Gopherus_agassizii
ENSXETG00000007283	larp4	92	68.619	ENSGGOG00000015230	LARP4	99	68.146	Gorilla_gorilla
ENSXETG00000007283	larp4	92	57.619	ENSHGLG00000013875	-	99	56.984	Heterocephalus_glaber_female
ENSXETG00000007283	larp4	50	61.254	ENSHGLG00000010979	-	80	62.573	Heterocephalus_glaber_female
ENSXETG00000007283	larp4	90	58.738	ENSHGLG00000005513	-	92	60.194	Heterocephalus_glaber_female
ENSXETG00000007283	larp4	50	61.254	ENSHGLG00100002832	-	80	62.573	Heterocephalus_glaber_male
ENSXETG00000007283	larp4	100	56.792	ENSHGLG00100011678	-	92	56.214	Heterocephalus_glaber_male
ENSXETG00000007283	larp4	100	58.781	ENSHGLG00100016984	-	93	60.087	Heterocephalus_glaber_male
ENSXETG00000007283	larp4	90	45.633	ENSHCOG00000020857	larp4ab	85	43.807	Hippocampus_comes
ENSXETG00000007283	larp4	95	49.928	ENSHCOG00000015951	larp4aa	87	47.983	Hippocampus_comes
ENSXETG00000007283	larp4	91	51.190	ENSIPUG00000007514	larp4aa	83	51.497	Ictalurus_punctatus
ENSXETG00000007283	larp4	96	47.563	ENSIPUG00000021659	larp4ab	89	47.858	Ictalurus_punctatus
ENSXETG00000007283	larp4	100	60.405	ENSSTOG00000003553	LARP4	93	60.405	Ictidomys_tridecemlineatus
ENSXETG00000007283	larp4	100	44.506	ENSKMAG00000018556	larp4ab	94	43.803	Kryptolebias_marmoratus
ENSXETG00000007283	larp4	99	49.171	ENSKMAG00000006800	larp4aa	87	51.293	Kryptolebias_marmoratus
ENSXETG00000007283	larp4	95	49.722	ENSLBEG00000014537	larp4aa	86	49.595	Labrus_bergylta
ENSXETG00000007283	larp4	92	46.327	ENSLBEG00000019306	larp4ab	86	46.786	Labrus_bergylta
ENSXETG00000007283	larp4	100	58.464	ENSLACG00000019090	LARP4	92	57.183	Latimeria_chalumnae
ENSXETG00000007283	larp4	100	54.062	ENSLOCG00000007113	larp4ab	89	53.782	Lepisosteus_oculatus
ENSXETG00000007283	larp4	99	60.029	ENSLAFG00000005160	LARP4	100	58.199	Loxodonta_africana
ENSXETG00000007283	larp4	92	67.782	ENSMFAG00000043681	LARP4	87	73.538	Macaca_fascicularis
ENSXETG00000007283	larp4	92	67.782	ENSMMUG00000008172	LARP4	87	73.538	Macaca_mulatta
ENSXETG00000007283	larp4	84	60.241	ENSMNEG00000037799	-	99	56.771	Macaca_nemestrina
ENSXETG00000007283	larp4	100	58.900	ENSMNEG00000034602	LARP4	100	59.435	Macaca_nemestrina
ENSXETG00000007283	larp4	92	67.782	ENSMLEG00000039661	LARP4	87	73.538	Mandrillus_leucophaeus
ENSXETG00000007283	larp4	100	43.983	ENSMAMG00000002616	larp4ab	94	44.337	Mastacembelus_armatus
ENSXETG00000007283	larp4	100	50.271	ENSMAMG00000011206	larp4aa	90	50.809	Mastacembelus_armatus
ENSXETG00000007283	larp4	95	64.590	ENSMGAG00000010598	LARP4	86	64.894	Meleagris_gallopavo
ENSXETG00000007283	larp4	82	81.143	ENSMICG00000012388	-	97	81.143	Microcebus_murinus
ENSXETG00000007283	larp4	81	77.019	ENSMICG00000030156	-	87	77.019	Microcebus_murinus
ENSXETG00000007283	larp4	99	59.710	ENSMOCG00000020635	Larp4	99	60.088	Microtus_ochrogaster
ENSXETG00000007283	larp4	95	43.452	ENSMMOG00000021861	larp4ab	88	57.453	Mola_mola
ENSXETG00000007283	larp4	95	48.997	ENSMMOG00000004785	larp4aa	86	48.711	Mola_mola
ENSXETG00000007283	larp4	94	50.383	MGP_CAROLIEiJ_G0020281	Larp4	72	72.954	Mus_caroli
ENSXETG00000007283	larp4	100	58.083	ENSMUSG00000023025	Larp4	99	58.696	Mus_musculus
ENSXETG00000007283	larp4	100	57.431	MGP_PahariEiJ_G0020284	Larp4	93	57.389	Mus_pahari
ENSXETG00000007283	larp4	100	59.654	ENSMPUG00000008706	LARP4	90	59.596	Mustela_putorius_furo
ENSXETG00000007283	larp4	100	59.857	ENSMLUG00000012513	-	92	59.857	Myotis_lucifugus
ENSXETG00000007283	larp4	99	56.996	ENSNGAG00000001577	-	99	57.080	Nannospalax_galili
ENSXETG00000007283	larp4	100	48.649	ENSNBRG00000011292	larp4aa	90	49.531	Neolamprologus_brichardi
ENSXETG00000007283	larp4	92	68.201	ENSNLEG00000017798	LARP4	87	73.538	Nomascus_leucogenys
ENSXETG00000007283	larp4	52	54.726	ENSOPRG00000004592	-	55	54.726	Ochotona_princeps
ENSXETG00000007283	larp4	100	58.442	ENSODEG00000009770	LARP4	93	59.885	Octodon_degus
ENSXETG00000007283	larp4	94	44.772	ENSONIG00000019124	larp4ab	89	44.527	Oreochromis_niloticus
ENSXETG00000007283	larp4	100	49.524	ENSONIG00000011895	larp4aa	93	49.041	Oreochromis_niloticus
ENSXETG00000007283	larp4	69	70.426	ENSOANG00000004373	LARP4	83	70.426	Ornithorhynchus_anatinus
ENSXETG00000007283	larp4	100	59.568	ENSOCUG00000026872	-	92	59.654	Oryctolagus_cuniculus
ENSXETG00000007283	larp4	100	59.137	ENSOCUG00000021417	-	92	59.222	Oryctolagus_cuniculus
ENSXETG00000007283	larp4	95	52.098	ENSORLG00000006758	larp4aa	86	51.814	Oryzias_latipes
ENSXETG00000007283	larp4	95	51.868	ENSORLG00020010258	larp4aa	86	52.035	Oryzias_latipes_hni
ENSXETG00000007283	larp4	95	52.168	ENSORLG00015002292	larp4aa	86	52.035	Oryzias_latipes_hsok
ENSXETG00000007283	larp4	95	52.624	ENSOMEG00000019749	larp4aa	78	80.537	Oryzias_melastigma
ENSXETG00000007283	larp4	70	62.185	ENSOGAG00000001415	LARP4	90	62.185	Otolemur_garnettii
ENSXETG00000007283	larp4	100	59.463	ENSOARG00000017702	LARP4	92	59.605	Ovis_aries
ENSXETG00000007283	larp4	59	51.621	ENSPPAG00000039122	-	79	55.742	Pan_paniscus
ENSXETG00000007283	larp4	83	68.052	ENSPPAG00000035100	LARP4	82	75.238	Pan_paniscus
ENSXETG00000007283	larp4	100	61.239	ENSPPRG00000004522	LARP4	89	73.231	Panthera_pardus
ENSXETG00000007283	larp4	100	61.239	ENSPTIG00000015617	LARP4	89	73.231	Panthera_tigris_altaica
ENSXETG00000007283	larp4	92	68.201	ENSPTRG00000004935	LARP4	87	73.538	Pan_troglodytes
ENSXETG00000007283	larp4	59	51.870	ENSPTRG00000045907	-	80	60.897	Pan_troglodytes
ENSXETG00000007283	larp4	92	67.782	ENSPANG00000022964	LARP4	87	73.538	Papio_anubis
ENSXETG00000007283	larp4	96	52.654	ENSPKIG00000005950	larp4ab	90	51.872	Paramormyrops_kingsleyae
ENSXETG00000007283	larp4	100	65.268	ENSPSIG00000015867	LARP4	92	65.268	Pelodiscus_sinensis
ENSXETG00000007283	larp4	90	60.190	ENSPEMG00000018433	Larp4	94	60.410	Peromyscus_maniculatus_bairdii
ENSXETG00000007283	larp4	78	41.758	ENSPMAG00000002788	LARP4	100	41.091	Petromyzon_marinus
ENSXETG00000007283	larp4	100	64.017	ENSPCIG00000000384	LARP4	92	64.017	Phascolarctos_cinereus
ENSXETG00000007283	larp4	95	50.919	ENSPFOG00000013148	larp4aa	99	50.599	Poecilia_formosa
ENSXETG00000007283	larp4	94	46.716	ENSPFOG00000009764	larp4ab	89	45.142	Poecilia_formosa
ENSXETG00000007283	larp4	95	50.919	ENSPLAG00000013626	larp4aa	87	52.279	Poecilia_latipinna
ENSXETG00000007283	larp4	94	45.808	ENSPLAG00000008502	larp4ab	89	44.970	Poecilia_latipinna
ENSXETG00000007283	larp4	95	50.211	ENSPMEG00000014271	larp4aa	87	52.137	Poecilia_mexicana
ENSXETG00000007283	larp4	94	46.647	ENSPMEG00000002720	larp4ab	89	45.455	Poecilia_mexicana
ENSXETG00000007283	larp4	95	51.909	ENSPREG00000022597	larp4aa	87	52.933	Poecilia_reticulata
ENSXETG00000007283	larp4	69	64.482	ENSPPYG00000004512	-	90	64.482	Pongo_abelii
ENSXETG00000007283	larp4	99	56.706	ENSPCAG00000003671	LARP4	97	55.750	Procavia_capensis
ENSXETG00000007283	larp4	85	72.840	ENSPCOG00000026291	LARP4	87	72.923	Propithecus_coquereli
ENSXETG00000007283	larp4	100	53.448	ENSPVAG00000016840	LARP4	91	53.659	Pteropus_vampyrus
ENSXETG00000007283	larp4	96	48.918	ENSPNAG00000014478	larp4ab	91	47.746	Pygocentrus_nattereri
ENSXETG00000007283	larp4	87	52.351	ENSPNAG00000024770	larp4aa	81	52.978	Pygocentrus_nattereri
ENSXETG00000007283	larp4	81	72.611	ENSRBIG00000036890	-	86	72.611	Rhinopithecus_bieti
ENSXETG00000007283	larp4	92	67.364	ENSRBIG00000038857	-	86	73.231	Rhinopithecus_bieti
ENSXETG00000007283	larp4	92	67.364	ENSRROG00000042764	-	88	73.231	Rhinopithecus_roxellana
ENSXETG00000007283	larp4	81	72.611	ENSRROG00000025487	-	86	72.611	Rhinopithecus_roxellana
ENSXETG00000007283	larp4	100	58.815	ENSSBOG00000026650	LARP4	100	59.527	Saimiri_boliviensis_boliviensis
ENSXETG00000007283	larp4	91	54.475	ENSSFOG00015003868	larp4aa	84	54.462	Scleropages_formosus
ENSXETG00000007283	larp4	95	50.731	ENSSFOG00015014096	larp4ab	90	51.608	Scleropages_formosus
ENSXETG00000007283	larp4	95	47.262	ENSSMAG00000002838	larp4ab	90	48.420	Scophthalmus_maximus
ENSXETG00000007283	larp4	95	49.294	ENSSMAG00000019473	larp4aa	87	50.989	Scophthalmus_maximus
ENSXETG00000007283	larp4	95	47.059	ENSSDUG00000006655	larp4ab	90	47.421	Seriola_dumerili
ENSXETG00000007283	larp4	95	46.241	ENSSLDG00000001791	larp4ab	90	47.801	Seriola_lalandi_dorsalis
ENSXETG00000007283	larp4	87	68.696	ENSSARG00000012469	LARP4	80	68.696	Sorex_araneus
ENSXETG00000007283	larp4	95	61.955	ENSSPUG00000016552	LARP4	86	62.952	Sphenodon_punctatus
ENSXETG00000007283	larp4	100	45.404	ENSSPAG00000002172	larp4ab	94	44.180	Stegastes_partitus
ENSXETG00000007283	larp4	95	49.927	ENSSPAG00000007222	larp4aa	75	84.138	Stegastes_partitus
ENSXETG00000007283	larp4	100	60.115	ENSSSCG00000028516	LARP4	92	67.866	Sus_scrofa
ENSXETG00000007283	larp4	100	66.232	ENSTGUG00000003479	LARP4	93	66.232	Taeniopygia_guttata
ENSXETG00000007283	larp4	91	50.304	ENSTNIG00000015109	larp4aa	86	50.837	Tetraodon_nigroviridis
ENSXETG00000007283	larp4	99	52.609	ENSTBEG00000005167	LARP4	92	52.319	Tupaia_belangeri
ENSXETG00000007283	larp4	100	59.626	ENSTTRG00000003764	LARP4	92	59.281	Tursiops_truncatus
ENSXETG00000007283	larp4	70	65.762	ENSUAMG00000013764	LARP4	89	66.738	Ursus_americanus
ENSXETG00000007283	larp4	100	60.750	ENSUMAG00000008473	LARP4	92	61.095	Ursus_maritimus
ENSXETG00000007283	larp4	100	58.345	ENSVPAG00000010136	LARP4	92	58.488	Vicugna_pacos
ENSXETG00000007283	larp4	100	61.527	ENSVVUG00000024717	LARP4	92	68.033	Vulpes_vulpes
ENSXETG00000007283	larp4	93	50.801	ENSXCOG00000006387	larp4aa	89	51.387	Xiphophorus_couchianus
ENSXETG00000007283	larp4	93	46.370	ENSXMAG00000002156	larp4ab	88	45.481	Xiphophorus_maculatus
ENSXETG00000007283	larp4	95	52.933	ENSXMAG00000010519	larp4aa	87	52.933	Xiphophorus_maculatus