EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000007303 (Gene tree)
Gene ID: -
Gene Symbol: rbm5
Alias: -
Full Name: Xenopus tropicalis RNA binding motif protein 5 (rbm5)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 46702 bases
Position: chrGL172795.1:2130148-2176849
Accession: NM_001017278
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000015911	zf-RanBP	PF00641.18	1.5e-10	1	1
ENSXETP00000015911	RRM_1	PF00076.22	1.2e-13	1	1
ENSXETP00000015907	G-patch	PF01585.23	8.1e-19	1	1
ENSXETP00000015911	G-patch	PF01585.23	8.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000015907	-	3585	-	ENSXETP00000015907	1021 (aa)	-	F6XFH8
ENSXETT00000015911	-	3104	-	ENSXETP00000015911	838 (aa)	XP_012820244	A4IGK4

Gene Model

Click here to download ENSXETG00000007303's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000007303's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000007303	rbm5	100	37.285	ENSG00000004534	RBM6	100	40.388	Homo_sapiens
ENSXETG00000007303	rbm5	100	36.042	ENSAMEG00000012049	RBM6	94	36.329	Ailuropoda_melanoleuca
ENSXETG00000007303	rbm5	100	34.583	ENSAPLG00000003536	RBM6	95	33.707	Anas_platyrhynchos
ENSXETG00000007303	rbm5	100	33.303	ENSACAG00000008480	RBM6	89	33.890	Anolis_carolinensis
ENSXETG00000007303	rbm5	100	36.727	ENSANAG00000037161	RBM6	97	38.973	Aotus_nancymaae
ENSXETG00000007303	rbm5	100	35.735	ENSBTAG00000006328	RBM6	90	35.109	Bos_taurus
ENSXETG00000007303	rbm5	100	37.048	ENSCJAG00000004620	RBM6	97	38.880	Callithrix_jacchus
ENSXETG00000007303	rbm5	100	36.138	ENSCAFG00000010914	RBM6	90	36.390	Canis_familiaris
ENSXETG00000007303	rbm5	100	36.138	ENSCAFG00020022120	RBM6	90	36.390	Canis_lupus_dingo
ENSXETG00000007303	rbm5	100	35.927	ENSCHIG00000007341	RBM6	90	35.266	Capra_hircus
ENSXETG00000007303	rbm5	96	36.209	ENSTSYG00000012969	RBM6	90	35.892	Carlito_syrichta
ENSXETG00000007303	rbm5	100	36.156	ENSCPOG00000008146	RBM6	96	35.545	Cavia_porcellus
ENSXETG00000007303	rbm5	100	37.012	ENSCATG00000032064	RBM6	100	38.449	Cercocebus_atys
ENSXETG00000007303	rbm5	100	36.441	ENSCLAG00000012000	RBM6	91	35.829	Chinchilla_lanigera
ENSXETG00000007303	rbm5	54	39.535	ENSCPBG00000002465	-	100	41.031	Chrysemys_picta_bellii
ENSXETG00000007303	rbm5	91	41.497	ENSCANG00000043615	RBM6	89	41.497	Colobus_angolensis_palliatus
ENSXETG00000007303	rbm5	100	36.182	ENSDNOG00000011746	RBM6	95	35.905	Dasypus_novemcinctus
ENSXETG00000007303	rbm5	98	36.310	ENSDORG00000004146	-	100	36.275	Dipodomys_ordii
ENSXETG00000007303	rbm5	86	42.723	ENSETEG00000012770	RBM6	76	42.723	Echinops_telfairi
ENSXETG00000007303	rbm5	100	36.564	ENSEASG00005011832	RBM6	90	35.748	Equus_asinus_asinus
ENSXETG00000007303	rbm5	100	36.564	ENSECAG00000015226	RBM6	90	35.748	Equus_caballus
ENSXETG00000007303	rbm5	100	35.885	ENSFCAG00000014634	RBM6	90	35.043	Felis_catus
ENSXETG00000007303	rbm5	100	32.858	ENSFALG00000008967	RBM6	90	32.765	Ficedula_albicollis
ENSXETG00000007303	rbm5	100	36.581	ENSFDAG00000014451	RBM6	94	35.973	Fukomys_damarensis
ENSXETG00000007303	rbm5	100	34.116	ENSGALG00000035578	RBM6	93	33.303	Gallus_gallus
ENSXETG00000007303	rbm5	98	37.585	ENSGGOG00000014459	RBM6	100	40.519	Gorilla_gorilla
ENSXETG00000007303	rbm5	100	35.912	ENSHGLG00000013189	-	94	35.333	Heterocephalus_glaber_female
ENSXETG00000007303	rbm5	100	36.260	ENSHGLG00100012994	-	94	35.680	Heterocephalus_glaber_male
ENSXETG00000007303	rbm5	100	36.004	ENSSTOG00000002392	RBM6	90	35.943	Ictidomys_tridecemlineatus
ENSXETG00000007303	rbm5	98	34.936	ENSJJAG00000016774	Rbm6	100	34.808	Jaculus_jaculus
ENSXETG00000007303	rbm5	98	36.133	ENSLAFG00000006727	RBM6	100	36.117	Loxodonta_africana
ENSXETG00000007303	rbm5	98	37.329	ENSMMUG00000003494	RBM6	97	41.131	Macaca_mulatta
ENSXETG00000007303	rbm5	54	37.778	ENSMLEG00000032642	RBM6	86	43.269	Mandrillus_leucophaeus
ENSXETG00000007303	rbm5	100	34.907	ENSMGAG00000002602	RBM6	92	34.467	Meleagris_gallopavo
ENSXETG00000007303	rbm5	100	36.182	ENSMICG00000016174	RBM6	100	38.413	Microcebus_murinus
ENSXETG00000007303	rbm5	100	35.310	ENSMODG00000012312	RBM6	90	35.250	Monodelphis_domestica
ENSXETG00000007303	rbm5	100	40.918	ENSMPUG00000013269	RBM6	90	40.779	Mustela_putorius_furo
ENSXETG00000007303	rbm5	100	35.862	ENSNGAG00000015804	Rbm6	100	35.953	Nannospalax_galili
ENSXETG00000007303	rbm5	98	36.868	ENSNLEG00000006932	RBM6	97	39.051	Nomascus_leucogenys
ENSXETG00000007303	rbm5	86	59.091	ENSMEUG00000006081	RBM6	79	57.955	Notamacropus_eugenii
ENSXETG00000007303	rbm5	100	34.417	ENSOPRG00000015113	RBM6	94	34.128	Ochotona_princeps
ENSXETG00000007303	rbm5	100	36.468	ENSOCUG00000011638	RBM6	94	36.217	Oryctolagus_cuniculus
ENSXETG00000007303	rbm5	100	36.023	ENSOARG00000011125	RBM6	90	35.361	Ovis_aries
ENSXETG00000007303	rbm5	100	37.285	ENSPPAG00000034940	RBM6	100	40.388	Pan_paniscus
ENSXETG00000007303	rbm5	100	35.885	ENSPPRG00000006572	RBM6	90	35.043	Panthera_pardus
ENSXETG00000007303	rbm5	100	35.885	ENSPTIG00000000403	RBM6	100	37.420	Panthera_tigris_altaica
ENSXETG00000007303	rbm5	98	37.512	ENSPTRG00000014943	RBM6	100	40.226	Pan_troglodytes
ENSXETG00000007303	rbm5	100	37.012	ENSPANG00000012436	RBM6	97	41.131	Papio_anubis
ENSXETG00000007303	rbm5	100	35.140	ENSPCIG00000021533	RBM6	99	35.080	Phascolarctos_cinereus
ENSXETG00000007303	rbm5	100	36.172	ENSPPYG00000013855	RBM6	94	35.667	Pongo_abelii
ENSXETG00000007303	rbm5	92	34.369	ENSPCAG00000005277	RBM6	84	34.479	Procavia_capensis
ENSXETG00000007303	rbm5	100	35.932	ENSPCOG00000014743	RBM6	99	36.197	Propithecus_coquereli
ENSXETG00000007303	rbm5	100	36.260	ENSPVAG00000006811	RBM6	94	36.095	Pteropus_vampyrus
ENSXETG00000007303	rbm5	100	37.203	ENSRBIG00000030131	RBM6	97	39.730	Rhinopithecus_bieti
ENSXETG00000007303	rbm5	100	37.298	ENSRROG00000029411	RBM6	97	39.730	Rhinopithecus_roxellana
ENSXETG00000007303	rbm5	90	42.275	ENSSBOG00000010277	-	88	41.737	Saimiri_boliviensis_boliviensis
ENSXETG00000007303	rbm5	100	35.888	ENSSHAG00000018151	RBM6	91	35.641	Sarcophilus_harrisii
ENSXETG00000007303	rbm5	99	34.738	ENSSPUG00000001946	RBM6	91	35.372	Sphenodon_punctatus
ENSXETG00000007303	rbm5	100	36.538	ENSSSCG00000011394	RBM6	95	35.646	Sus_scrofa
ENSXETG00000007303	rbm5	100	33.743	ENSTGUG00000004964	RBM6	91	33.112	Taeniopygia_guttata
ENSXETG00000007303	rbm5	91	47.345	ENSTBEG00000003847	RBM6	83	45.455	Tupaia_belangeri
ENSXETG00000007303	rbm5	100	35.509	ENSTTRG00000007713	RBM6	95	34.766	Tursiops_truncatus
ENSXETG00000007303	rbm5	52	41.481	ENSUAMG00000028346	RBM6	88	41.590	Ursus_americanus
ENSXETG00000007303	rbm5	100	36.042	ENSUMAG00000022039	RBM6	90	36.294	Ursus_maritimus
ENSXETG00000007303	rbm5	100	36.042	ENSVVUG00000028652	RBM6	90	35.924	Vulpes_vulpes