EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000007397 (Gene tree)
Gene ID: -
Gene Symbol: tra2a
Alias: -
Full Name: Xenopus tropicalis transformer 2 alpha homolog (tra2a)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 10628 bases
Position: chrGL172692.1:3144408-3155035
Accession: NM_001004819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000062237	RRM_1	PF00076.22	1.1e-19	1	1
ENSXETP00000016108	RRM_1	PF00076.22	1.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000063558	-	1193	-	ENSXETP00000062237	282 (aa)	-	F6YWF8
ENSXETT00000016108	-	1356	-	ENSXETP00000016108	287 (aa)	-	Q6GLA3

Gene Model

Click here to download ENSXETG00000007397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000007397's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000007397	tra2a	90	83.270	ENSG00000164548	TRA2A	90	83.270	Homo_sapiens
ENSXETG00000007397	tra2a	56	77.778	ENSAPOG00000017425	tra2a	72	82.353	Acanthochromis_polyacanthus
ENSXETG00000007397	tra2a	87	84.462	ENSAMEG00000003501	TRA2A	51	87.425	Ailuropoda_melanoleuca
ENSXETG00000007397	tra2a	54	82.895	ENSACIG00000001333	tra2a	79	84.967	Amphilophus_citrinellus
ENSXETG00000007397	tra2a	61	71.503	ENSAOCG00000015445	tra2a	53	89.844	Amphiprion_ocellaris
ENSXETG00000007397	tra2a	56	78.395	ENSAPEG00000018557	tra2a	76	82.353	Amphiprion_percula
ENSXETG00000007397	tra2a	61	74.611	ENSATEG00000000671	tra2a	61	75.936	Anabas_testudineus
ENSXETG00000007397	tra2a	87	82.213	ENSAPLG00000013689	TRA2A	61	87.425	Anas_platyrhynchos
ENSXETG00000007397	tra2a	90	83.396	ENSACAG00000013502	TRA2A	90	83.019	Anolis_carolinensis
ENSXETG00000007397	tra2a	53	85.430	ENSANAG00000035184	TRA2A	62	85.816	Aotus_nancymaae
ENSXETG00000007397	tra2a	61	72.539	ENSACLG00000024845	tra2a	61	75.269	Astatotilapia_calliptera
ENSXETG00000007397	tra2a	62	86.034	ENSAMXG00000005553	tra2a	69	85.311	Astyanax_mexicanus
ENSXETG00000007397	tra2a	90	82.890	ENSBTAG00000012622	TRA2A	90	82.890	Bos_taurus
ENSXETG00000007397	tra2a	90	83.270	ENSCJAG00000001509	-	90	83.270	Callithrix_jacchus
ENSXETG00000007397	tra2a	94	82.482	ENSCJAG00000045802	-	96	81.749	Callithrix_jacchus
ENSXETG00000007397	tra2a	90	82.890	ENSCAFG00000002788	TRA2A	91	82.890	Canis_familiaris
ENSXETG00000007397	tra2a	62	86.441	ENSCAFG00020002745	TRA2A	63	87.425	Canis_lupus_dingo
ENSXETG00000007397	tra2a	90	83.270	ENSTSYG00000000388	TRA2A	90	83.270	Carlito_syrichta
ENSXETG00000007397	tra2a	88	71.825	ENSCAPG00000017377	TRA2A	58	69.492	Cavia_aperea
ENSXETG00000007397	tra2a	90	83.270	ENSCPOG00000010739	TRA2A	90	83.270	Cavia_porcellus
ENSXETG00000007397	tra2a	90	83.270	ENSCCAG00000019576	TRA2A	90	83.270	Cebus_capucinus
ENSXETG00000007397	tra2a	90	83.270	ENSCATG00000041219	TRA2A	90	83.270	Cercocebus_atys
ENSXETG00000007397	tra2a	90	83.270	ENSCLAG00000007917	TRA2A	90	83.270	Chinchilla_lanigera
ENSXETG00000007397	tra2a	90	83.270	ENSCSAG00000014051	TRA2A	90	83.270	Chlorocebus_sabaeus
ENSXETG00000007397	tra2a	90	83.658	ENSCHOG00000001130	TRA2A	89	82.800	Choloepus_hoffmanni
ENSXETG00000007397	tra2a	90	83.019	ENSCPBG00000022466	TRA2A	90	83.019	Chrysemys_picta_bellii
ENSXETG00000007397	tra2a	90	83.270	ENSCANG00000031292	TRA2A	90	83.270	Colobus_angolensis_palliatus
ENSXETG00000007397	tra2a	90	83.650	ENSCGRG00001019980	Tra2a	90	83.270	Cricetulus_griseus_chok1gshd
ENSXETG00000007397	tra2a	87	84.861	ENSCGRG00000006087	Tra2a	63	88.701	Cricetulus_griseus_crigri
ENSXETG00000007397	tra2a	64	71.782	ENSCSEG00000012193	tra2a	64	85.156	Cynoglossus_semilaevis
ENSXETG00000007397	tra2a	59	73.099	ENSDARG00000007863	tra2a	87	72.832	Danio_rerio
ENSXETG00000007397	tra2a	90	83.650	ENSDNOG00000039446	TRA2A	90	83.650	Dasypus_novemcinctus
ENSXETG00000007397	tra2a	90	82.510	ENSDORG00000009361	Tra2a	90	82.129	Dipodomys_ordii
ENSXETG00000007397	tra2a	62	86.592	ENSETEG00000007250	TRA2A	60	86.034	Echinops_telfairi
ENSXETG00000007397	tra2a	90	82.890	ENSEASG00005022002	TRA2A	90	82.890	Equus_asinus_asinus
ENSXETG00000007397	tra2a	90	82.890	ENSECAG00000011508	TRA2A	90	82.890	Equus_caballus
ENSXETG00000007397	tra2a	90	82.129	ENSEEUG00000015674	TRA2A	90	82.129	Erinaceus_europaeus
ENSXETG00000007397	tra2a	73	70.339	ENSELUG00000005846	tra2a	65	65.403	Esox_lucius
ENSXETG00000007397	tra2a	90	82.890	ENSFCAG00000005361	TRA2A	90	82.890	Felis_catus
ENSXETG00000007397	tra2a	87	83.665	ENSFALG00000009605	TRA2A	89	85.892	Ficedula_albicollis
ENSXETG00000007397	tra2a	90	83.270	ENSFDAG00000004949	TRA2A	90	83.270	Fukomys_damarensis
ENSXETG00000007397	tra2a	63	74.112	ENSGMOG00000013740	tra2a	64	74.093	Gadus_morhua
ENSXETG00000007397	tra2a	90	81.132	ENSGALG00000010973	TRA2A	90	81.132	Gallus_gallus
ENSXETG00000007397	tra2a	90	71.103	ENSGACG00000006878	tra2a	60	77.966	Gasterosteus_aculeatus
ENSXETG00000007397	tra2a	90	83.019	ENSGAGG00000005793	TRA2A	90	83.019	Gopherus_agassizii
ENSXETG00000007397	tra2a	90	83.270	ENSGGOG00000009053	TRA2A	90	83.270	Gorilla_gorilla
ENSXETG00000007397	tra2a	61	74.611	ENSHBUG00000018234	tra2a	61	75.135	Haplochromis_burtoni
ENSXETG00000007397	tra2a	90	83.270	ENSHGLG00000012168	TRA2A	90	83.270	Heterocephalus_glaber_female
ENSXETG00000007397	tra2a	90	83.270	ENSHGLG00100014577	TRA2A	90	83.270	Heterocephalus_glaber_male
ENSXETG00000007397	tra2a	67	61.000	ENSHCOG00000006314	tra2a	66	65.986	Hippocampus_comes
ENSXETG00000007397	tra2a	90	83.270	ENSSTOG00000012073	TRA2A	90	83.270	Ictidomys_tridecemlineatus
ENSXETG00000007397	tra2a	90	82.510	ENSJJAG00000022787	Tra2a	90	82.129	Jaculus_jaculus
ENSXETG00000007397	tra2a	87	70.149	ENSLBEG00000005297	tra2a	63	70.769	Labrus_bergylta
ENSXETG00000007397	tra2a	88	83.730	ENSLACG00000014765	TRA2A	86	85.306	Latimeria_chalumnae
ENSXETG00000007397	tra2a	90	70.463	ENSLOCG00000011615	-	90	70.463	Lepisosteus_oculatus
ENSXETG00000007397	tra2a	90	83.650	ENSLAFG00000006598	TRA2A	90	83.650	Loxodonta_africana
ENSXETG00000007397	tra2a	90	83.270	ENSMFAG00000043211	TRA2A	90	83.270	Macaca_fascicularis
ENSXETG00000007397	tra2a	90	83.270	ENSMMUG00000006286	TRA2A	90	83.270	Macaca_mulatta
ENSXETG00000007397	tra2a	90	83.270	ENSMNEG00000040670	TRA2A	90	83.270	Macaca_nemestrina
ENSXETG00000007397	tra2a	90	83.270	ENSMLEG00000032154	TRA2A	90	83.270	Mandrillus_leucophaeus
ENSXETG00000007397	tra2a	73	76.724	ENSMAMG00000008575	tra2a	57	80.137	Mastacembelus_armatus
ENSXETG00000007397	tra2a	61	72.539	ENSMZEG00005009142	tra2a	61	75.269	Maylandia_zebra
ENSXETG00000007397	tra2a	89	82.422	ENSMGAG00000010514	TRA2A	87	83.468	Meleagris_gallopavo
ENSXETG00000007397	tra2a	90	82.890	ENSMICG00000043639	-	90	82.890	Microcebus_murinus
ENSXETG00000007397	tra2a	100	65.411	ENSMICG00000036849	-	62	75.449	Microcebus_murinus
ENSXETG00000007397	tra2a	70	72.727	ENSMOCG00000006467	-	60	88.696	Microtus_ochrogaster
ENSXETG00000007397	tra2a	65	80.214	ENSMOCG00000010249	-	63	82.635	Microtus_ochrogaster
ENSXETG00000007397	tra2a	91	73.152	ENSMMOG00000020174	tra2a	57	78.443	Mola_mola
ENSXETG00000007397	tra2a	90	84.411	ENSMODG00000000807	TRA2A	90	84.411	Monodelphis_domestica
ENSXETG00000007397	tra2a	75	72.052	ENSMALG00000020875	tra2a	62	73.846	Monopterus_albus
ENSXETG00000007397	tra2a	90	83.650	ENSMUSG00000029817	Tra2a	90	83.270	Mus_musculus
ENSXETG00000007397	tra2a	90	83.650	MGP_PahariEiJ_G0022115	Tra2a	60	88.701	Mus_pahari
ENSXETG00000007397	tra2a	90	83.650	MGP_SPRETEiJ_G0029368	Tra2a	90	83.270	Mus_spretus
ENSXETG00000007397	tra2a	90	82.890	ENSMPUG00000013480	TRA2A	90	82.890	Mustela_putorius_furo
ENSXETG00000007397	tra2a	90	83.270	ENSMLUG00000013972	TRA2A	90	83.270	Myotis_lucifugus
ENSXETG00000007397	tra2a	90	81.749	ENSNGAG00000023805	Tra2a	90	81.369	Nannospalax_galili
ENSXETG00000007397	tra2a	56	83.333	ENSNBRG00000005992	tra2a	73	84.967	Neolamprologus_brichardi
ENSXETG00000007397	tra2a	90	83.270	ENSNLEG00000014794	TRA2A	90	83.270	Nomascus_leucogenys
ENSXETG00000007397	tra2a	67	61.257	ENSNLEG00000029659	-	88	65.789	Nomascus_leucogenys
ENSXETG00000007397	tra2a	90	82.890	ENSMEUG00000001202	TRA2A	90	84.030	Notamacropus_eugenii
ENSXETG00000007397	tra2a	90	82.129	ENSOPRG00000007606	TRA2A	90	80.989	Ochotona_princeps
ENSXETG00000007397	tra2a	90	83.270	ENSODEG00000008335	TRA2A	90	83.270	Octodon_degus
ENSXETG00000007397	tra2a	90	71.831	ENSONIG00000004503	tra2a	61	73.936	Oreochromis_niloticus
ENSXETG00000007397	tra2a	90	81.395	ENSOANG00000014202	TRA2A	88	83.730	Ornithorhynchus_anatinus
ENSXETG00000007397	tra2a	90	82.890	ENSOCUG00000024139	TRA2A	90	82.890	Oryctolagus_cuniculus
ENSXETG00000007397	tra2a	73	66.981	ENSORLG00000022191	tra2a	61	71.176	Oryzias_latipes
ENSXETG00000007397	tra2a	73	66.509	ENSORLG00020003490	tra2a	61	70.588	Oryzias_latipes_hni
ENSXETG00000007397	tra2a	73	66.038	ENSORLG00015015485	tra2a	61	70.000	Oryzias_latipes_hsok
ENSXETG00000007397	tra2a	73	66.507	ENSOMEG00000017864	tra2a	60	70.659	Oryzias_melastigma
ENSXETG00000007397	tra2a	87	84.462	ENSOGAG00000009733	TRA2A	59	87.425	Otolemur_garnettii
ENSXETG00000007397	tra2a	90	75.665	ENSOARG00000002323	-	65	86.441	Ovis_aries
ENSXETG00000007397	tra2a	90	83.270	ENSOARG00000013147	TRA2A	90	83.270	Ovis_aries
ENSXETG00000007397	tra2a	90	83.270	ENSPPAG00000034382	TRA2A	90	83.270	Pan_paniscus
ENSXETG00000007397	tra2a	90	82.890	ENSPPRG00000015216	TRA2A	90	82.890	Panthera_pardus
ENSXETG00000007397	tra2a	90	82.890	ENSPTIG00000021114	TRA2A	90	82.890	Panthera_tigris_altaica
ENSXETG00000007397	tra2a	91	83.521	ENSPTRG00000018988	TRA2A	91	83.270	Pan_troglodytes
ENSXETG00000007397	tra2a	90	83.270	ENSPTRG00000046098	-	90	83.270	Pan_troglodytes
ENSXETG00000007397	tra2a	90	83.270	ENSPANG00000014541	TRA2A	90	83.270	Papio_anubis
ENSXETG00000007397	tra2a	90	69.751	ENSPKIG00000012298	tra2a	61	74.054	Paramormyrops_kingsleyae
ENSXETG00000007397	tra2a	90	84.436	ENSPSIG00000014993	TRA2A	88	85.366	Pelodiscus_sinensis
ENSXETG00000007397	tra2a	90	82.890	ENSPEMG00000008564	-	90	82.510	Peromyscus_maniculatus_bairdii
ENSXETG00000007397	tra2a	63	67.416	ENSPMAG00000007947	tra2a	57	67.901	Petromyzon_marinus
ENSXETG00000007397	tra2a	90	84.791	ENSPCIG00000007917	TRA2A	90	84.791	Phascolarctos_cinereus
ENSXETG00000007397	tra2a	90	83.270	ENSPPYG00000017728	TRA2A	90	83.270	Pongo_abelii
ENSXETG00000007397	tra2a	90	84.030	ENSPCAG00000004148	TRA2A	91	84.030	Procavia_capensis
ENSXETG00000007397	tra2a	61	83.237	ENSPCOG00000020465	TRA2A	85	68.699	Propithecus_coquereli
ENSXETG00000007397	tra2a	90	83.270	ENSPVAG00000011298	TRA2A	90	83.270	Pteropus_vampyrus
ENSXETG00000007397	tra2a	56	84.568	ENSPNYG00000020134	tra2a	76	84.568	Pundamilia_nyererei
ENSXETG00000007397	tra2a	62	71.282	ENSPNAG00000000482	tra2a	61	75.135	Pygocentrus_nattereri
ENSXETG00000007397	tra2a	90	83.650	ENSRNOG00000009156	Tra2a	90	83.270	Rattus_norvegicus
ENSXETG00000007397	tra2a	63	77.778	ENSRBIG00000036805	TRA2A	66	95.312	Rhinopithecus_bieti
ENSXETG00000007397	tra2a	90	83.650	ENSRROG00000030758	TRA2A	90	83.650	Rhinopithecus_roxellana
ENSXETG00000007397	tra2a	90	83.270	ENSSBOG00000031562	TRA2A	90	83.270	Saimiri_boliviensis_boliviensis
ENSXETG00000007397	tra2a	87	86.056	ENSSHAG00000005727	TRA2A	87	84.959	Sarcophilus_harrisii
ENSXETG00000007397	tra2a	59	81.176	ENSSFOG00015014004	tra2a	61	73.404	Scleropages_formosus
ENSXETG00000007397	tra2a	64	70.098	ENSSMAG00000014242	tra2a	62	71.351	Scophthalmus_maximus
ENSXETG00000007397	tra2a	61	84.000	ENSSDUG00000005610	tra2a	59	83.616	Seriola_dumerili
ENSXETG00000007397	tra2a	54	83.553	ENSSLDG00000025577	tra2a	81	84.868	Seriola_lalandi_dorsalis
ENSXETG00000007397	tra2a	60	84.524	ENSSARG00000012900	TRA2A	87	65.447	Sorex_araneus
ENSXETG00000007397	tra2a	90	84.528	ENSSPUG00000006143	TRA2A	90	84.528	Sphenodon_punctatus
ENSXETG00000007397	tra2a	61	74.611	ENSSPAG00000004184	tra2a	61	76.344	Stegastes_partitus
ENSXETG00000007397	tra2a	90	82.890	ENSSSCG00000015387	TRA2A	90	82.890	Sus_scrofa
ENSXETG00000007397	tra2a	60	85.882	ENSTGUG00000002795	TRA2A	62	85.629	Taeniopygia_guttata
ENSXETG00000007397	tra2a	74	85.238	ENSTBEG00000013773	TRA2A	75	85.446	Tupaia_belangeri
ENSXETG00000007397	tra2a	90	82.510	ENSTTRG00000008922	TRA2A	90	82.510	Tursiops_truncatus
ENSXETG00000007397	tra2a	56	86.420	ENSUMAG00000001181	TRA2A	79	86.420	Ursus_maritimus
ENSXETG00000007397	tra2a	61	84.302	ENSVPAG00000001829	TRA2A	89	68.000	Vicugna_pacos
ENSXETG00000007397	tra2a	90	82.890	ENSVVUG00000001045	TRA2A	90	82.890	Vulpes_vulpes