EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000007847 (Gene tree)
Gene ID: -
Gene Symbol: blm
Alias: -
Full Name: Bloom syndrome RecQ like helicase
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 25093 bases
Position: chrGL172676.1:921611-946703
Accession: XB-GENE-982561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000017154	HRDC	PF00570.23	4.4e-12	1	1
ENSXETP00000017154	BDHCT	PF08072.11	4.8e-17	1	1
ENSXETP00000054074	BDHCT	PF08072.11	1.8e-12	1	1
ENSXETP00000017154	DEAD	PF00270.29	7.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000054074	-	387	-	ENSXETP00000054074	129 (aa)	-	F7BT64
ENSXETT00000017154	-	4522	-	ENSXETP00000017154	1419 (aa)	-	F6THN7
ENSXETT00000062629	-	1369	-	ENSXETP00000058859	146 (aa)	-	F6WQ47

Gene Model

Click here to download ENSXETG00000007847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000007847's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000007847	blm	54	72.879	ENSG00000197299	BLM	99	51.534	Homo_sapiens
ENSXETG00000007847	blm	55	66.201	ENSAPOG00000017966	blm	99	46.380	Acanthochromis_polyacanthus
ENSXETG00000007847	blm	55	66.667	ENSACIG00000023762	blm	99	47.007	Amphilophus_citrinellus
ENSXETG00000007847	blm	74	55.032	ENSAOCG00000003318	blm	76	55.535	Amphiprion_ocellaris
ENSXETG00000007847	blm	87	52.418	ENSAPEG00000018105	blm	87	55.351	Amphiprion_percula
ENSXETG00000007847	blm	55	67.506	ENSATEG00000006421	blm	99	48.003	Anabas_testudineus
ENSXETG00000007847	blm	80	56.723	ENSAPLG00000006878	BLM	97	56.698	Anas_platyrhynchos
ENSXETG00000007847	blm	55	72.786	ENSACAG00000014275	BLM	100	50.000	Anolis_carolinensis
ENSXETG00000007847	blm	87	72.458	ENSANAG00000038415	BLM	99	50.738	Aotus_nancymaae
ENSXETG00000007847	blm	55	66.497	ENSACLG00000020354	blm	99	46.824	Astatotilapia_calliptera
ENSXETG00000007847	blm	78	71.248	ENSAMXG00000016970	blm	88	63.521	Astyanax_mexicanus
ENSXETG00000007847	blm	74	31.776	ENSBTAG00000020301	BLM	99	56.250	Bos_taurus
ENSXETG00000007847	blm	86	72.165	ENSCJAG00000009803	BLM	99	50.741	Callithrix_jacchus
ENSXETG00000007847	blm	74	35.238	ENSCAFG00000012385	BLM	99	51.576	Canis_familiaris
ENSXETG00000007847	blm	52	74.159	ENSCAFG00020016111	BLM	90	74.159	Canis_lupus_dingo
ENSXETG00000007847	blm	54	72.669	ENSCHIG00000010329	BLM	99	56.250	Capra_hircus
ENSXETG00000007847	blm	54	72.494	ENSTSYG00000012368	BLM	99	50.239	Carlito_syrichta
ENSXETG00000007847	blm	76	78.846	ENSCAPG00000017976	BLM	94	70.915	Cavia_aperea
ENSXETG00000007847	blm	54	71.903	ENSCPOG00000001761	BLM	99	50.846	Cavia_porcellus
ENSXETG00000007847	blm	87	72.423	ENSCCAG00000023069	BLM	99	50.779	Cebus_capucinus
ENSXETG00000007847	blm	54	72.365	ENSCATG00000040609	BLM	74	86.000	Cercocebus_atys
ENSXETG00000007847	blm	99	50.368	ENSCLAG00000012111	BLM	99	50.975	Chinchilla_lanigera
ENSXETG00000007847	blm	54	72.237	ENSCSAG00000017040	BLM	99	51.085	Chlorocebus_sabaeus
ENSXETG00000007847	blm	56	67.773	ENSCHOG00000006255	BLM	93	58.542	Choloepus_hoffmanni
ENSXETG00000007847	blm	90	53.614	ENSCPBG00000025000	BLM	95	75.900	Chrysemys_picta_bellii
ENSXETG00000007847	blm	99	50.273	ENSCGRG00001024897	Blm	99	50.376	Cricetulus_griseus_chok1gshd
ENSXETG00000007847	blm	68	44.040	ENSCGRG00000016261	Blm	97	44.132	Cricetulus_griseus_crigri
ENSXETG00000007847	blm	80	52.174	ENSCSEG00000013483	blm	85	53.112	Cynoglossus_semilaevis
ENSXETG00000007847	blm	83	67.000	ENSDARG00000077089	blm	89	63.017	Danio_rerio
ENSXETG00000007847	blm	54	72.879	ENSDORG00000011033	Blm	99	59.410	Dipodomys_ordii
ENSXETG00000007847	blm	53	58.943	ENSETEG00000015019	BLM	78	48.341	Echinops_telfairi
ENSXETG00000007847	blm	54	69.340	ENSEASG00005006727	BLM	99	48.989	Equus_asinus_asinus
ENSXETG00000007847	blm	54	73.333	ENSECAG00000011405	BLM	99	51.033	Equus_caballus
ENSXETG00000007847	blm	82	71.775	ENSEEUG00000001434	BLM	98	48.863	Erinaceus_europaeus
ENSXETG00000007847	blm	68	67.043	ENSELUG00000019098	blm	99	46.680	Esox_lucius
ENSXETG00000007847	blm	50	83.058	ENSFCAG00000006087	BLM	99	50.883	Felis_catus
ENSXETG00000007847	blm	74	58.627	ENSFALG00000010981	BLM	99	52.187	Ficedula_albicollis
ENSXETG00000007847	blm	77	90.909	ENSFDAG00000012658	BLM	98	64.728	Fukomys_damarensis
ENSXETG00000007847	blm	84	63.868	ENSGMOG00000016431	blm	99	58.218	Gadus_morhua
ENSXETG00000007847	blm	87	52.607	ENSGALG00000008256	BLM	100	49.220	Gallus_gallus
ENSXETG00000007847	blm	55	67.350	ENSGAFG00000001117	blm	99	47.350	Gambusia_affinis
ENSXETG00000007847	blm	70	63.869	ENSGACG00000010863	blm	100	75.475	Gasterosteus_aculeatus
ENSXETG00000007847	blm	53	80.360	ENSGAGG00000005383	BLM	88	80.360	Gopherus_agassizii
ENSXETG00000007847	blm	74	82.231	ENSGGOG00000007710	BLM	75	86.093	Gorilla_gorilla
ENSXETG00000007847	blm	55	66.539	ENSHBUG00000015943	blm	99	46.829	Haplochromis_burtoni
ENSXETG00000007847	blm	86	73.102	ENSHGLG00000013231	BLM	99	50.471	Heterocephalus_glaber_female
ENSXETG00000007847	blm	61	61.943	ENSHCOG00000011455	blm	89	61.943	Hippocampus_comes
ENSXETG00000007847	blm	60	62.053	ENSIPUG00000000529	blm	74	62.053	Ictalurus_punctatus
ENSXETG00000007847	blm	54	72.692	ENSSTOG00000005000	BLM	99	50.571	Ictidomys_tridecemlineatus
ENSXETG00000007847	blm	54	61.637	ENSJJAG00000016322	Blm	99	51.148	Jaculus_jaculus
ENSXETG00000007847	blm	59	63.732	ENSKMAG00000016608	blm	72	63.847	Kryptolebias_marmoratus
ENSXETG00000007847	blm	94	30.827	ENSLACG00000006490	BLM	100	51.651	Latimeria_chalumnae
ENSXETG00000007847	blm	84	68.774	ENSLOCG00000014302	blm	88	64.310	Lepisosteus_oculatus
ENSXETG00000007847	blm	54	72.622	ENSMFAG00000042982	BLM	74	86.333	Macaca_fascicularis
ENSXETG00000007847	blm	54	72.494	ENSMMUG00000019526	BLM	74	86.333	Macaca_mulatta
ENSXETG00000007847	blm	54	72.201	ENSMNEG00000031251	BLM	74	86.000	Macaca_nemestrina
ENSXETG00000007847	blm	54	68.252	ENSMLEG00000032934	BLM	99	49.010	Mandrillus_leucophaeus
ENSXETG00000007847	blm	58	64.353	ENSMAMG00000008726	blm	99	47.243	Mastacembelus_armatus
ENSXETG00000007847	blm	83	66.923	ENSMZEG00005022323	blm	99	46.703	Maylandia_zebra
ENSXETG00000007847	blm	54	71.447	ENSMAUG00000008953	Blm	99	50.102	Mesocricetus_auratus
ENSXETG00000007847	blm	54	72.321	ENSMICG00000034442	BLM	99	50.736	Microcebus_murinus
ENSXETG00000007847	blm	99	51.099	ENSMOCG00000016367	Blm	99	51.236	Microtus_ochrogaster
ENSXETG00000007847	blm	80	53.114	ENSMMOG00000006959	blm	99	46.388	Mola_mola
ENSXETG00000007847	blm	83	73.597	ENSMODG00000019449	BLM	88	69.390	Monodelphis_domestica
ENSXETG00000007847	blm	55	67.087	ENSMALG00000007323	blm	99	47.469	Monopterus_albus
ENSXETG00000007847	blm	54	71.282	MGP_CAROLIEiJ_G0029907	Blm	99	49.733	Mus_caroli
ENSXETG00000007847	blm	74	35.514	ENSMPUG00000015657	BLM	98	51.122	Mustela_putorius_furo
ENSXETG00000007847	blm	83	72.222	ENSNGAG00000001275	Blm	99	50.402	Nannospalax_galili
ENSXETG00000007847	blm	83	66.923	ENSNBRG00000019702	blm	99	46.424	Neolamprologus_brichardi
ENSXETG00000007847	blm	54	69.923	ENSNLEG00000012087	BLM	99	56.534	Nomascus_leucogenys
ENSXETG00000007847	blm	81	68.511	ENSMEUG00000007253	BLM	90	63.773	Notamacropus_eugenii
ENSXETG00000007847	blm	79	72.576	ENSOPRG00000011667	BLM	80	72.576	Ochotona_princeps
ENSXETG00000007847	blm	54	66.880	ENSODEG00000015373	BLM	99	55.070	Octodon_degus
ENSXETG00000007847	blm	55	66.164	ENSONIG00000015193	blm	99	47.449	Oreochromis_niloticus
ENSXETG00000007847	blm	53	73.187	ENSOANG00000009316	-	100	73.187	Ornithorhynchus_anatinus
ENSXETG00000007847	blm	83	72.809	ENSOCUG00000013969	BLM	99	51.348	Oryctolagus_cuniculus
ENSXETG00000007847	blm	55	66.794	ENSORLG00000008110	blm	99	46.930	Oryzias_latipes
ENSXETG00000007847	blm	61	66.794	ENSORLG00020004812	blm	92	61.323	Oryzias_latipes_hni
ENSXETG00000007847	blm	55	67.178	ENSORLG00015018640	blm	88	61.676	Oryzias_latipes_hsok
ENSXETG00000007847	blm	83	66.497	ENSOMEG00000023545	blm	93	61.173	Oryzias_melastigma
ENSXETG00000007847	blm	58	71.151	ENSOGAG00000005708	BLM	99	49.155	Otolemur_garnettii
ENSXETG00000007847	blm	54	72.925	ENSOARG00000012875	BLM	99	51.084	Ovis_aries
ENSXETG00000007847	blm	54	72.494	ENSPPAG00000032173	BLM	99	51.600	Pan_paniscus
ENSXETG00000007847	blm	50	82.609	ENSPPRG00000002471	BLM	99	50.341	Panthera_pardus
ENSXETG00000007847	blm	50	82.099	ENSPTIG00000016168	BLM	99	50.171	Panthera_tigris_altaica
ENSXETG00000007847	blm	54	72.237	ENSPTRG00000007460	BLM	99	51.191	Pan_troglodytes
ENSXETG00000007847	blm	54	72.365	ENSPANG00000018572	BLM	74	86.333	Papio_anubis
ENSXETG00000007847	blm	88	66.962	ENSPKIG00000008954	blm	99	46.711	Paramormyrops_kingsleyae
ENSXETG00000007847	blm	50	68.144	ENSPMGG00000006629	blm	85	63.592	Periophthalmus_magnuspinnatus
ENSXETG00000007847	blm	54	72.774	ENSPEMG00000017348	Blm	99	50.237	Peromyscus_maniculatus_bairdii
ENSXETG00000007847	blm	83	73.087	ENSPCIG00000006609	BLM	88	69.425	Phascolarctos_cinereus
ENSXETG00000007847	blm	55	67.136	ENSPFOG00000005059	blm	99	47.275	Poecilia_formosa
ENSXETG00000007847	blm	55	66.880	ENSPLAG00000017344	blm	99	47.368	Poecilia_latipinna
ENSXETG00000007847	blm	55	67.008	ENSPMEG00000000321	blm	99	47.693	Poecilia_mexicana
ENSXETG00000007847	blm	55	66.624	ENSPREG00000007715	blm	99	47.622	Poecilia_reticulata
ENSXETG00000007847	blm	54	71.851	ENSPPYG00000006784	BLM	99	50.581	Pongo_abelii
ENSXETG00000007847	blm	62	70.860	ENSPCAG00000008960	BLM	69	65.675	Procavia_capensis
ENSXETG00000007847	blm	99	45.735	ENSPCOG00000000439	BLM	99	47.337	Propithecus_coquereli
ENSXETG00000007847	blm	72	87.667	ENSPVAG00000011642	BLM	73	87.667	Pteropus_vampyrus
ENSXETG00000007847	blm	55	51.403	ENSPNYG00000010956	blm	99	38.658	Pundamilia_nyererei
ENSXETG00000007847	blm	54	68.077	ENSPNAG00000011714	blm	99	48.201	Pygocentrus_nattereri
ENSXETG00000007847	blm	54	70.732	ENSRNOG00000011213	Blm	99	49.048	Rattus_norvegicus
ENSXETG00000007847	blm	59	72.201	ENSRBIG00000029656	BLM	74	85.667	Rhinopithecus_bieti
ENSXETG00000007847	blm	54	72.201	ENSRROG00000037871	BLM	74	85.667	Rhinopithecus_roxellana
ENSXETG00000007847	blm	52	81.276	ENSSBOG00000030957	BLM	99	48.789	Saimiri_boliviensis_boliviensis
ENSXETG00000007847	blm	55	73.052	ENSSHAG00000007988	BLM	100	50.742	Sarcophilus_harrisii
ENSXETG00000007847	blm	55	67.257	ENSSFOG00015015462	blm	70	62.844	Scleropages_formosus
ENSXETG00000007847	blm	55	65.823	ENSSMAG00000001120	blm	99	47.051	Scophthalmus_maximus
ENSXETG00000007847	blm	55	66.582	ENSSLDG00000000634	blm	99	47.497	Seriola_lalandi_dorsalis
ENSXETG00000007847	blm	54	66.497	ENSSARG00000006398	BLM	81	53.867	Sorex_araneus
ENSXETG00000007847	blm	69	67.013	ENSSPUG00000000013	BLM	97	56.503	Sphenodon_punctatus
ENSXETG00000007847	blm	55	66.667	ENSSPAG00000013999	blm	99	46.479	Stegastes_partitus
ENSXETG00000007847	blm	56	72.902	ENSSSCG00000001816	BLM	95	72.902	Sus_scrofa
ENSXETG00000007847	blm	80	50.602	ENSTGUG00000009959	-	99	50.947	Taeniopygia_guttata
ENSXETG00000007847	blm	64	65.473	ENSTRUG00000019860	blm	99	45.767	Takifugu_rubripes
ENSXETG00000007847	blm	100	46.703	ENSTNIG00000019246	blm	100	47.307	Tetraodon_nigroviridis
ENSXETG00000007847	blm	54	73.590	ENSTTRG00000016386	BLM	99	50.440	Tursiops_truncatus
ENSXETG00000007847	blm	77	82.402	ENSUMAG00000009105	BLM	95	75.314	Ursus_maritimus
ENSXETG00000007847	blm	54	69.063	ENSVPAG00000000085	BLM	99	49.493	Vicugna_pacos
ENSXETG00000007847	blm	56	71.703	ENSVVUG00000006402	BLM	95	71.781	Vulpes_vulpes