EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000007852 (Gene tree)
Gene ID: -
Gene Symbol: tfb1m
Alias: -
Full Name: Xenopus tropicalis transcription factor B1%2C mitochondrial (tfb1m)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 6894 bases
Position: chrGL173609.1:61913-68806
Accession: NM_001016494
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000017166	RrnaAD	PF00398.20	8.2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000017166	-	1630	-	ENSXETP00000017166	346 (aa)	XP_012827224	B1H151

Gene Model

Click here to download ENSXETG00000007852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000007852's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000007852	tfb1m	99	74.783	ENSG00000029639	TFB1M	99	74.783	Homo_sapiens
ENSXETG00000007852	tfb1m	96	72.810	ENSAPOG00000015493	tfb1m	93	72.810	Acanthochromis_polyacanthus
ENSXETG00000007852	tfb1m	100	71.676	ENSAMEG00000012761	TFB1M	99	71.676	Ailuropoda_melanoleuca
ENSXETG00000007852	tfb1m	97	70.958	ENSACIG00000014290	tfb1m	95	70.958	Amphilophus_citrinellus
ENSXETG00000007852	tfb1m	96	72.508	ENSAOCG00000004027	tfb1m	93	72.508	Amphiprion_ocellaris
ENSXETG00000007852	tfb1m	96	72.810	ENSAPEG00000020359	tfb1m	93	72.810	Amphiprion_percula
ENSXETG00000007852	tfb1m	97	72.404	ENSATEG00000006826	tfb1m	95	72.404	Anabas_testudineus
ENSXETG00000007852	tfb1m	99	71.264	ENSAPLG00000006328	TFB1M	100	71.264	Anas_platyrhynchos
ENSXETG00000007852	tfb1m	99	73.761	ENSACAG00000005244	TFB1M	99	73.761	Anolis_carolinensis
ENSXETG00000007852	tfb1m	95	76.596	ENSANAG00000021469	TFB1M	99	75.439	Aotus_nancymaae
ENSXETG00000007852	tfb1m	97	73.134	ENSACLG00000018734	tfb1m	93	73.134	Astatotilapia_calliptera
ENSXETG00000007852	tfb1m	95	71.515	ENSAMXG00000036128	tfb1m	90	71.515	Astyanax_mexicanus
ENSXETG00000007852	tfb1m	99	72.754	ENSBTAG00000031895	TFB1M	98	77.928	Bos_taurus
ENSXETG00000007852	tfb1m	91	43.925	WBGene00020189	tfbm-1	87	43.925	Caenorhabditis_elegans
ENSXETG00000007852	tfb1m	99	74.344	ENSCJAG00000012540	TFB1M	99	74.344	Callithrix_jacchus
ENSXETG00000007852	tfb1m	100	72.832	ENSCAFG00000000581	TFB1M	99	72.832	Canis_familiaris
ENSXETG00000007852	tfb1m	100	72.832	ENSCAFG00020015224	TFB1M	99	72.832	Canis_lupus_dingo
ENSXETG00000007852	tfb1m	95	75.684	ENSCHIG00000017013	TFB1M	99	75.684	Capra_hircus
ENSXETG00000007852	tfb1m	99	72.886	ENSTSYG00000012298	TFB1M	99	72.886	Carlito_syrichta
ENSXETG00000007852	tfb1m	68	53.191	ENSCAPG00000013843	TFB1M	78	53.191	Cavia_aperea
ENSXETG00000007852	tfb1m	99	72.174	ENSCPOG00000030422	TFB1M	99	72.174	Cavia_porcellus
ENSXETG00000007852	tfb1m	99	75.073	ENSCCAG00000015250	TFB1M	99	75.073	Cebus_capucinus
ENSXETG00000007852	tfb1m	98	54.142	ENSCATG00000009009	TFB1M	99	53.509	Cercocebus_atys
ENSXETG00000007852	tfb1m	98	74.412	ENSCLAG00000004500	TFB1M	99	74.412	Chinchilla_lanigera
ENSXETG00000007852	tfb1m	93	77.399	ENSCSAG00000013259	TFB1M	98	75.510	Chlorocebus_sabaeus
ENSXETG00000007852	tfb1m	99	73.178	ENSCHOG00000011245	TFB1M	98	73.178	Choloepus_hoffmanni
ENSXETG00000007852	tfb1m	98	75.367	ENSCPBG00000016320	TFB1M	100	75.367	Chrysemys_picta_bellii
ENSXETG00000007852	tfb1m	88	47.557	ENSCING00000003901	-	80	47.557	Ciona_intestinalis
ENSXETG00000007852	tfb1m	88	49.186	ENSCSAVG00000004721	-	80	49.186	Ciona_savignyi
ENSXETG00000007852	tfb1m	97	76.647	ENSCANG00000029768	TFB1M	99	76.647	Colobus_angolensis_palliatus
ENSXETG00000007852	tfb1m	99	72.012	ENSCGRG00001022866	Tfb1m	99	72.012	Cricetulus_griseus_chok1gshd
ENSXETG00000007852	tfb1m	95	72.561	ENSCGRG00000018084	Tfb1m	99	72.561	Cricetulus_griseus_crigri
ENSXETG00000007852	tfb1m	98	71.765	ENSCSEG00000000131	tfb1m	96	71.765	Cynoglossus_semilaevis
ENSXETG00000007852	tfb1m	96	72.508	ENSCVAG00000009201	tfb1m	94	72.508	Cyprinodon_variegatus
ENSXETG00000007852	tfb1m	99	65.116	ENSDARG00000040727	tfb1m	99	72.075	Danio_rerio
ENSXETG00000007852	tfb1m	82	63.121	ENSDNOG00000032672	-	98	63.121	Dasypus_novemcinctus
ENSXETG00000007852	tfb1m	99	72.334	ENSDNOG00000015984	-	95	72.334	Dasypus_novemcinctus
ENSXETG00000007852	tfb1m	93	74.613	ENSDORG00000012938	Tfb1m	99	72.566	Dipodomys_ordii
ENSXETG00000007852	tfb1m	90	48.896	FBgn0261381	mtTFB1	94	48.896	Drosophila_melanogaster
ENSXETG00000007852	tfb1m	98	50.442	ENSETEG00000005709	TFB1M	97	50.442	Echinops_telfairi
ENSXETG00000007852	tfb1m	92	54.375	ENSEBUG00000010530	tfb1m	92	54.348	Eptatretus_burgeri
ENSXETG00000007852	tfb1m	59	30.097	ENSEBUG00000006158	dimt1l	77	30.097	Eptatretus_burgeri
ENSXETG00000007852	tfb1m	99	72.464	ENSEASG00005018887	TFB1M	99	72.464	Equus_asinus_asinus
ENSXETG00000007852	tfb1m	99	73.333	ENSECAG00000020997	TFB1M	99	73.333	Equus_caballus
ENSXETG00000007852	tfb1m	99	73.314	ENSEEUG00000014899	TFB1M	100	73.314	Erinaceus_europaeus
ENSXETG00000007852	tfb1m	97	72.754	ENSELUG00000002752	tfb1m	85	72.754	Esox_lucius
ENSXETG00000007852	tfb1m	100	72.543	ENSFCAG00000038785	TFB1M	99	72.543	Felis_catus
ENSXETG00000007852	tfb1m	99	71.014	ENSFALG00000012500	TFB1M	99	71.014	Ficedula_albicollis
ENSXETG00000007852	tfb1m	92	75.625	ENSFDAG00000016985	TFB1M	99	73.294	Fukomys_damarensis
ENSXETG00000007852	tfb1m	96	72.810	ENSFHEG00000008407	tfb1m	94	72.810	Fundulus_heteroclitus
ENSXETG00000007852	tfb1m	97	73.134	ENSGMOG00000018738	tfb1m	96	73.134	Gadus_morhua
ENSXETG00000007852	tfb1m	92	77.918	ENSGALG00000013647	TFB1M	94	76.364	Gallus_gallus
ENSXETG00000007852	tfb1m	96	73.414	ENSGAFG00000017997	tfb1m	94	73.414	Gambusia_affinis
ENSXETG00000007852	tfb1m	97	73.353	ENSGACG00000006884	tfb1m	94	73.353	Gasterosteus_aculeatus
ENSXETG00000007852	tfb1m	99	73.913	ENSGAGG00000025345	TFB1M	100	73.913	Gopherus_agassizii
ENSXETG00000007852	tfb1m	99	74.783	ENSGGOG00000012189	TFB1M	99	74.783	Gorilla_gorilla
ENSXETG00000007852	tfb1m	97	72.836	ENSHBUG00000019396	tfb1m	93	72.836	Haplochromis_burtoni
ENSXETG00000007852	tfb1m	98	74.260	ENSHGLG00000002028	TFB1M	97	74.260	Heterocephalus_glaber_female
ENSXETG00000007852	tfb1m	98	74.260	ENSHGLG00100001412	TFB1M	97	74.260	Heterocephalus_glaber_male
ENSXETG00000007852	tfb1m	96	72.205	ENSHCOG00000014135	tfb1m	95	72.205	Hippocampus_comes
ENSXETG00000007852	tfb1m	97	69.733	ENSIPUG00000010964	tfb1m	99	69.733	Ictalurus_punctatus
ENSXETG00000007852	tfb1m	99	73.607	ENSSTOG00000026264	TFB1M	99	73.607	Ictidomys_tridecemlineatus
ENSXETG00000007852	tfb1m	98	73.373	ENSJJAG00000022171	Tfb1m	95	73.373	Jaculus_jaculus
ENSXETG00000007852	tfb1m	96	69.789	ENSKMAG00000012667	tfb1m	95	69.789	Kryptolebias_marmoratus
ENSXETG00000007852	tfb1m	96	72.810	ENSLBEG00000011505	tfb1m	93	72.810	Labrus_bergylta
ENSXETG00000007852	tfb1m	97	76.488	ENSLACG00000012594	TFB1M	95	76.488	Latimeria_chalumnae
ENSXETG00000007852	tfb1m	95	66.766	ENSLOCG00000016850	tfb1m	99	65.330	Lepisosteus_oculatus
ENSXETG00000007852	tfb1m	99	71.720	ENSLAFG00000014035	-	99	71.720	Loxodonta_africana
ENSXETG00000007852	tfb1m	93	62.422	ENSLAFG00000032309	-	100	62.422	Loxodonta_africana
ENSXETG00000007852	tfb1m	98	75.740	ENSMFAG00000031968	TFB1M	98	75.740	Macaca_fascicularis
ENSXETG00000007852	tfb1m	98	75.740	ENSMMUG00000011171	TFB1M	98	75.740	Macaca_mulatta
ENSXETG00000007852	tfb1m	98	76.036	ENSMNEG00000042278	TFB1M	98	76.036	Macaca_nemestrina
ENSXETG00000007852	tfb1m	98	76.036	ENSMLEG00000000044	TFB1M	98	76.036	Mandrillus_leucophaeus
ENSXETG00000007852	tfb1m	96	72.810	ENSMAMG00000009423	tfb1m	94	72.810	Mastacembelus_armatus
ENSXETG00000007852	tfb1m	97	73.134	ENSMZEG00005005640	tfb1m	89	73.134	Maylandia_zebra
ENSXETG00000007852	tfb1m	74	80.000	ENSMGAG00000012779	TFB1M	99	78.788	Meleagris_gallopavo
ENSXETG00000007852	tfb1m	99	72.222	ENSMAUG00000006705	Tfb1m	99	72.222	Mesocricetus_auratus
ENSXETG00000007852	tfb1m	100	73.988	ENSMICG00000045849	TFB1M	99	73.988	Microcebus_murinus
ENSXETG00000007852	tfb1m	99	72.727	ENSMOCG00000013879	Tfb1m	99	72.727	Microtus_ochrogaster
ENSXETG00000007852	tfb1m	96	73.716	ENSMMOG00000002203	tfb1m	93	73.716	Mola_mola
ENSXETG00000007852	tfb1m	99	74.269	ENSMODG00000008169	TFB1M	99	74.419	Monodelphis_domestica
ENSXETG00000007852	tfb1m	97	72.156	ENSMALG00000011657	tfb1m	89	72.156	Monopterus_albus
ENSXETG00000007852	tfb1m	99	70.968	MGP_CAROLIEiJ_G0021018	Tfb1m	99	70.968	Mus_caroli
ENSXETG00000007852	tfb1m	99	71.554	ENSMUSG00000036983	Tfb1m	99	71.554	Mus_musculus
ENSXETG00000007852	tfb1m	94	74.847	MGP_PahariEiJ_G0023336	Tfb1m	96	74.242	Mus_pahari
ENSXETG00000007852	tfb1m	99	71.554	MGP_SPRETEiJ_G0021923	Tfb1m	99	71.554	Mus_spretus
ENSXETG00000007852	tfb1m	100	72.254	ENSMPUG00000002073	TFB1M	99	72.254	Mustela_putorius_furo
ENSXETG00000007852	tfb1m	99	73.684	ENSMLUG00000011329	TFB1M	99	73.684	Myotis_lucifugus
ENSXETG00000007852	tfb1m	99	72.222	ENSNGAG00000015154	Tfb1m	96	72.222	Nannospalax_galili
ENSXETG00000007852	tfb1m	97	72.836	ENSNBRG00000009004	tfb1m	94	72.836	Neolamprologus_brichardi
ENSXETG00000007852	tfb1m	99	75.072	ENSNLEG00000034352	TFB1M	99	75.072	Nomascus_leucogenys
ENSXETG00000007852	tfb1m	99	60.756	ENSMEUG00000001699	-	99	60.756	Notamacropus_eugenii
ENSXETG00000007852	tfb1m	98	56.471	ENSOPRG00000008921	TFB1M	99	56.471	Ochotona_princeps
ENSXETG00000007852	tfb1m	98	72.781	ENSODEG00000005915	TFB1M	97	72.781	Octodon_degus
ENSXETG00000007852	tfb1m	97	73.433	ENSONIG00000008109	tfb1m	97	73.433	Oreochromis_niloticus
ENSXETG00000007852	tfb1m	99	72.222	ENSOCUG00000012154	TFB1M	100	72.222	Oryctolagus_cuniculus
ENSXETG00000007852	tfb1m	96	73.716	ENSORLG00000017328	tfb1m	81	73.716	Oryzias_latipes
ENSXETG00000007852	tfb1m	96	73.716	ENSORLG00020002250	tfb1m	97	73.716	Oryzias_latipes_hni
ENSXETG00000007852	tfb1m	95	73.636	ENSORLG00015016067	tfb1m	96	73.636	Oryzias_latipes_hsok
ENSXETG00000007852	tfb1m	96	73.716	ENSOMEG00000015641	tfb1m	94	73.716	Oryzias_melastigma
ENSXETG00000007852	tfb1m	100	71.182	ENSOGAG00000011681	TFB1M	99	71.182	Otolemur_garnettii
ENSXETG00000007852	tfb1m	95	74.030	ENSOARG00000004216	TFB1M	99	74.030	Ovis_aries
ENSXETG00000007852	tfb1m	99	74.783	ENSPPAG00000030834	TFB1M	99	74.783	Pan_paniscus
ENSXETG00000007852	tfb1m	98	72.941	ENSPPRG00000013578	TFB1M	99	72.941	Panthera_pardus
ENSXETG00000007852	tfb1m	100	72.254	ENSPTIG00000003540	TFB1M	99	72.254	Panthera_tigris_altaica
ENSXETG00000007852	tfb1m	99	74.783	ENSPTRG00000018730	TFB1M	99	74.783	Pan_troglodytes
ENSXETG00000007852	tfb1m	98	76.331	ENSPANG00000007489	TFB1M	98	76.331	Papio_anubis
ENSXETG00000007852	tfb1m	99	68.208	ENSPKIG00000021117	tfb1m	99	68.208	Paramormyrops_kingsleyae
ENSXETG00000007852	tfb1m	97	76.119	ENSPSIG00000006643	TFB1M	98	76.119	Pelodiscus_sinensis
ENSXETG00000007852	tfb1m	95	71.560	ENSPMGG00000011289	tfb1m	94	71.560	Periophthalmus_magnuspinnatus
ENSXETG00000007852	tfb1m	98	72.861	ENSPEMG00000010410	Tfb1m	98	72.861	Peromyscus_maniculatus_bairdii
ENSXETG00000007852	tfb1m	57	60.914	ENSPMAG00000008056	tfb1m	99	57.014	Petromyzon_marinus
ENSXETG00000007852	tfb1m	96	75.602	ENSPCIG00000001010	TFB1M	93	75.602	Phascolarctos_cinereus
ENSXETG00000007852	tfb1m	96	72.372	ENSPFOG00000005139	tfb1m	94	72.372	Poecilia_formosa
ENSXETG00000007852	tfb1m	96	73.112	ENSPLAG00000021410	tfb1m	94	73.112	Poecilia_latipinna
ENSXETG00000007852	tfb1m	96	72.205	ENSPMEG00000020166	tfb1m	94	72.205	Poecilia_mexicana
ENSXETG00000007852	tfb1m	96	72.810	ENSPREG00000022392	tfb1m	94	72.810	Poecilia_reticulata
ENSXETG00000007852	tfb1m	99	72.254	ENSPPYG00000017123	TFB1M	99	72.254	Pongo_abelii
ENSXETG00000007852	tfb1m	86	61.824	ENSPCAG00000007078	TFB1M	99	61.824	Procavia_capensis
ENSXETG00000007852	tfb1m	99	74.636	ENSPCOG00000028453	TFB1M	99	74.636	Propithecus_coquereli
ENSXETG00000007852	tfb1m	100	73.410	ENSPVAG00000015818	TFB1M	99	73.410	Pteropus_vampyrus
ENSXETG00000007852	tfb1m	97	72.537	ENSPNYG00000007330	tfb1m	93	72.537	Pundamilia_nyererei
ENSXETG00000007852	tfb1m	99	69.795	ENSPNAG00000007507	tfb1m	97	69.795	Pygocentrus_nattereri
ENSXETG00000007852	tfb1m	99	72.141	ENSRNOG00000056223	Tfb1m	99	72.141	Rattus_norvegicus
ENSXETG00000007852	tfb1m	97	76.347	ENSRBIG00000039975	TFB1M	99	76.347	Rhinopithecus_bieti
ENSXETG00000007852	tfb1m	97	76.048	ENSRROG00000033802	TFB1M	99	76.048	Rhinopithecus_roxellana
ENSXETG00000007852	tfb1m	99	75.367	ENSSBOG00000008663	TFB1M	99	75.367	Saimiri_boliviensis_boliviensis
ENSXETG00000007852	tfb1m	99	64.140	ENSSHAG00000013259	TFB1M	99	64.140	Sarcophilus_harrisii
ENSXETG00000007852	tfb1m	99	69.186	ENSSFOG00015009739	tfb1m	98	69.186	Scleropages_formosus
ENSXETG00000007852	tfb1m	96	73.414	ENSSMAG00000008229	tfb1m	94	73.414	Scophthalmus_maximus
ENSXETG00000007852	tfb1m	97	73.591	ENSSDUG00000011871	tfb1m	94	73.591	Seriola_dumerili
ENSXETG00000007852	tfb1m	97	73.887	ENSSLDG00000023923	tfb1m	94	73.887	Seriola_lalandi_dorsalis
ENSXETG00000007852	tfb1m	64	76.126	ENSSARG00000003159	TFB1M	100	76.126	Sorex_araneus
ENSXETG00000007852	tfb1m	99	72.886	ENSSPUG00000015253	TFB1M	99	72.886	Sphenodon_punctatus
ENSXETG00000007852	tfb1m	97	71.642	ENSSPAG00000019515	tfb1m	94	71.642	Stegastes_partitus
ENSXETG00000007852	tfb1m	99	73.178	ENSSSCG00000024361	TFB1M	99	73.178	Sus_scrofa
ENSXETG00000007852	tfb1m	96	74.320	ENSTGUG00000011136	TFB1M	96	74.320	Taeniopygia_guttata
ENSXETG00000007852	tfb1m	96	70.997	ENSTRUG00000020334	tfb1m	93	70.997	Takifugu_rubripes
ENSXETG00000007852	tfb1m	64	75.000	ENSTNIG00000016882	tfb1m	97	75.000	Tetraodon_nigroviridis
ENSXETG00000007852	tfb1m	95	74.242	ENSTBEG00000008769	TFB1M	98	72.886	Tupaia_belangeri
ENSXETG00000007852	tfb1m	95	74.924	ENSTTRG00000006327	TFB1M	97	74.924	Tursiops_truncatus
ENSXETG00000007852	tfb1m	99	71.261	ENSUAMG00000017802	TFB1M	97	71.261	Ursus_americanus
ENSXETG00000007852	tfb1m	99	71.848	ENSUMAG00000013377	TFB1M	89	71.848	Ursus_maritimus
ENSXETG00000007852	tfb1m	95	74.618	ENSVPAG00000010148	TFB1M	96	74.618	Vicugna_pacos
ENSXETG00000007852	tfb1m	99	73.256	ENSVVUG00000007643	TFB1M	100	73.256	Vulpes_vulpes
ENSXETG00000007852	tfb1m	96	72.810	ENSXCOG00000013230	tfb1m	94	72.810	Xiphophorus_couchianus
ENSXETG00000007852	tfb1m	96	72.810	ENSXMAG00000019222	tfb1m	94	72.810	Xiphophorus_maculatus