EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000007936 (Gene tree)
Gene ID: -
Gene Symbol: farsa
Alias: -
Full Name: Xenopus tropicalis phenylalanyl-tRNA synthetase subunit alpha (farsa)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 9809 bases
Position: chrGL173084.1:653004-662812
Accession: NM_001079359
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000017401	tRNA-synt_2d	PF01409.20	1.9e-90	1	1
ENSXETP00000048748	tRNA-synt_2d	PF01409.20	2.6e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000017401	-	1772	-	ENSXETP00000017401	498 (aa)	XP_012808633	F6R3C1
ENSXETT00000048748	-	2215	-	ENSXETP00000048748	427 (aa)	-	F6U5Z0

Gene Model

Click here to download ENSXETG00000007936's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000007936's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000007936	farsa	100	76.506	ENSG00000179115	FARSA	99	77.246	Homo_sapiens
ENSXETG00000007936	farsa	100	79.518	ENSAPOG00000011465	farsa	100	79.518	Acanthochromis_polyacanthus
ENSXETG00000007936	farsa	100	75.703	ENSAMEG00000012446	FARSA	98	75.703	Ailuropoda_melanoleuca
ENSXETG00000007936	farsa	100	75.100	ENSACIG00000020499	farsa	100	75.100	Amphilophus_citrinellus
ENSXETG00000007936	farsa	100	79.920	ENSAOCG00000000581	farsa	100	79.920	Amphiprion_ocellaris
ENSXETG00000007936	farsa	100	79.719	ENSAPEG00000017695	farsa	100	79.719	Amphiprion_percula
ENSXETG00000007936	farsa	100	71.084	ENSATEG00000012807	farsa	100	71.084	Anabas_testudineus
ENSXETG00000007936	farsa	100	65.531	ENSATEG00000012633	farsa	100	65.531	Anabas_testudineus
ENSXETG00000007936	farsa	99	76.400	ENSACAG00000017166	FARSA	84	76.400	Anolis_carolinensis
ENSXETG00000007936	farsa	100	75.703	ENSANAG00000037420	FARSA	98	75.703	Aotus_nancymaae
ENSXETG00000007936	farsa	100	79.920	ENSACLG00000001716	farsa	100	79.920	Astatotilapia_calliptera
ENSXETG00000007936	farsa	100	78.916	ENSAMXG00000037912	farsa	100	78.916	Astyanax_mexicanus
ENSXETG00000007936	farsa	100	75.904	ENSBTAG00000021374	FARSA	98	75.904	Bos_taurus
ENSXETG00000007936	farsa	99	60.446	WBGene00001497	fars-1	98	60.446	Caenorhabditis_elegans
ENSXETG00000007936	farsa	99	75.654	ENSCJAG00000004686	FARSA	98	71.084	Callithrix_jacchus
ENSXETG00000007936	farsa	100	76.707	ENSCAFG00000017096	FARSA	98	76.707	Canis_familiaris
ENSXETG00000007936	farsa	100	76.707	ENSCAFG00020005315	FARSA	98	76.707	Canis_lupus_dingo
ENSXETG00000007936	farsa	100	72.088	ENSCHIG00000022617	FARSA	98	72.088	Capra_hircus
ENSXETG00000007936	farsa	92	73.799	ENSTSYG00000002595	FARSA	83	73.799	Carlito_syrichta
ENSXETG00000007936	farsa	93	75.108	ENSCAPG00000011353	FARSA	95	76.562	Cavia_aperea
ENSXETG00000007936	farsa	99	75.551	ENSCPOG00000000787	FARSA	98	75.551	Cavia_porcellus
ENSXETG00000007936	farsa	100	75.904	ENSCCAG00000028176	FARSA	98	75.904	Cebus_capucinus
ENSXETG00000007936	farsa	99	76.152	ENSCLAG00000015489	FARSA	98	76.152	Chinchilla_lanigera
ENSXETG00000007936	farsa	94	77.682	ENSCSAG00000006530	FARSA	98	77.682	Chlorocebus_sabaeus
ENSXETG00000007936	farsa	97	80.083	ENSCPBG00000023915	FARSA	98	79.150	Chrysemys_picta_bellii
ENSXETG00000007936	farsa	99	66.265	ENSCING00000002567	-	99	66.265	Ciona_intestinalis
ENSXETG00000007936	farsa	99	66.064	ENSCSAVG00000010683	-	98	66.064	Ciona_savignyi
ENSXETG00000007936	farsa	100	76.305	ENSCANG00000043649	-	98	76.305	Colobus_angolensis_palliatus
ENSXETG00000007936	farsa	100	76.000	ENSCGRG00001019769	Farsa	98	75.904	Cricetulus_griseus_chok1gshd
ENSXETG00000007936	farsa	100	76.000	ENSCGRG00000013415	Farsa	98	75.904	Cricetulus_griseus_crigri
ENSXETG00000007936	farsa	100	78.715	ENSCSEG00000016214	farsa	96	78.715	Cynoglossus_semilaevis
ENSXETG00000007936	farsa	100	79.000	ENSCVAG00000007907	farsa	100	79.000	Cyprinodon_variegatus
ENSXETG00000007936	farsa	100	79.200	ENSDARG00000098825	farsa	100	79.200	Danio_rerio
ENSXETG00000007936	farsa	96	76.891	ENSDNOG00000032350	FARSA	98	76.891	Dasypus_novemcinctus
ENSXETG00000007936	farsa	99	75.050	ENSDORG00000010118	Farsa	98	75.050	Dipodomys_ordii
ENSXETG00000007936	farsa	99	63.030	FBgn0030007	alpha-PheRS	99	63.030	Drosophila_melanogaster
ENSXETG00000007936	farsa	99	69.416	ENSETEG00000018673	FARSA	98	69.416	Echinops_telfairi
ENSXETG00000007936	farsa	70	69.697	ENSEBUG00000008545	farsa	99	69.697	Eptatretus_burgeri
ENSXETG00000007936	farsa	99	70.575	ENSEASG00005004093	FARSA	95	66.102	Equus_asinus_asinus
ENSXETG00000007936	farsa	87	92.593	ENSECAG00000015139	FARSA	93	76.707	Equus_caballus
ENSXETG00000007936	farsa	100	77.510	ENSELUG00000010183	farsa	99	80.132	Esox_lucius
ENSXETG00000007936	farsa	100	76.707	ENSFCAG00000023511	FARSA	98	76.707	Felis_catus
ENSXETG00000007936	farsa	99	75.952	ENSFDAG00000005987	FARSA	98	75.952	Fukomys_damarensis
ENSXETG00000007936	farsa	100	79.719	ENSFHEG00000009382	farsa	94	79.719	Fundulus_heteroclitus
ENSXETG00000007936	farsa	100	77.154	ENSGMOG00000018319	farsa	100	77.154	Gadus_morhua
ENSXETG00000007936	farsa	99	72.032	ENSGALG00000040258	FARSA	87	72.032	Gallus_gallus
ENSXETG00000007936	farsa	100	79.200	ENSGAFG00000014146	farsa	100	79.200	Gambusia_affinis
ENSXETG00000007936	farsa	100	79.158	ENSGACG00000006278	farsa	100	79.158	Gasterosteus_aculeatus
ENSXETG00000007936	farsa	99	79.352	ENSGAGG00000000753	FARSA	98	79.352	Gopherus_agassizii
ENSXETG00000007936	farsa	100	76.506	ENSGGOG00000003418	FARSA	98	76.506	Gorilla_gorilla
ENSXETG00000007936	farsa	100	79.920	ENSHBUG00000019852	farsa	100	79.920	Haplochromis_burtoni
ENSXETG00000007936	farsa	99	75.952	ENSHGLG00000005213	FARSA	98	75.952	Heterocephalus_glaber_female
ENSXETG00000007936	farsa	99	76.152	ENSHGLG00100009586	FARSA	98	76.152	Heterocephalus_glaber_male
ENSXETG00000007936	farsa	100	78.313	ENSHCOG00000019548	farsa	100	78.313	Hippocampus_comes
ENSXETG00000007936	farsa	100	78.916	ENSIPUG00000007635	farsa	100	78.916	Ictalurus_punctatus
ENSXETG00000007936	farsa	99	75.654	ENSSTOG00000008748	FARSA	98	75.654	Ictidomys_tridecemlineatus
ENSXETG00000007936	farsa	100	78.000	ENSKMAG00000010698	farsa	100	78.000	Kryptolebias_marmoratus
ENSXETG00000007936	farsa	100	79.317	ENSLBEG00000006757	-	100	79.317	Labrus_bergylta
ENSXETG00000007936	farsa	99	78.404	ENSLBEG00000001258	farsa	98	77.855	Labrus_bergylta
ENSXETG00000007936	farsa	99	78.638	ENSLOCG00000008389	farsa	96	78.879	Lepisosteus_oculatus
ENSXETG00000007936	farsa	100	76.104	ENSLAFG00000016154	FARSA	98	76.104	Loxodonta_africana
ENSXETG00000007936	farsa	100	76.305	ENSMFAG00000030595	FARSA	98	76.305	Macaca_fascicularis
ENSXETG00000007936	farsa	100	76.305	ENSMMUG00000004390	FARSA	98	76.305	Macaca_mulatta
ENSXETG00000007936	farsa	100	76.305	ENSMNEG00000043866	FARSA	98	76.305	Macaca_nemestrina
ENSXETG00000007936	farsa	100	76.353	ENSMLEG00000029157	FARSA	98	76.353	Mandrillus_leucophaeus
ENSXETG00000007936	farsa	100	79.600	ENSMAMG00000010636	farsa	100	79.600	Mastacembelus_armatus
ENSXETG00000007936	farsa	100	79.920	ENSMZEG00005002319	farsa	100	79.920	Maylandia_zebra
ENSXETG00000007936	farsa	96	76.778	ENSMAUG00000009188	Farsa	98	75.502	Mesocricetus_auratus
ENSXETG00000007936	farsa	99	76.660	ENSMICG00000016272	FARSA	98	76.660	Microcebus_murinus
ENSXETG00000007936	farsa	99	76.152	ENSMOCG00000011399	Farsa	98	76.056	Microtus_ochrogaster
ENSXETG00000007936	farsa	100	75.100	ENSMMOG00000006287	farsa	100	75.100	Mola_mola
ENSXETG00000007936	farsa	99	76.754	ENSMODG00000011519	FARSA	100	76.754	Monodelphis_domestica
ENSXETG00000007936	farsa	100	75.100	ENSMALG00000001972	farsa	100	75.100	Monopterus_albus
ENSXETG00000007936	farsa	99	75.752	MGP_CAROLIEiJ_G0031312	Farsa	98	75.952	Mus_caroli
ENSXETG00000007936	farsa	96	77.149	ENSMUSG00000003808	Farsa	98	76.152	Mus_musculus
ENSXETG00000007936	farsa	99	74.950	MGP_PahariEiJ_G0022917	Farsa	98	75.952	Mus_pahari
ENSXETG00000007936	farsa	96	77.149	MGP_SPRETEiJ_G0032431	Farsa	98	76.152	Mus_spretus
ENSXETG00000007936	farsa	100	76.305	ENSMPUG00000004400	FARSA	98	76.305	Mustela_putorius_furo
ENSXETG00000007936	farsa	100	77.108	ENSMLUG00000012767	FARSA	98	77.108	Myotis_lucifugus
ENSXETG00000007936	farsa	78	75.227	ENSNGAG00000018353	Farsa	100	75.881	Nannospalax_galili
ENSXETG00000007936	farsa	100	80.120	ENSNBRG00000010063	farsa	100	80.120	Neolamprologus_brichardi
ENSXETG00000007936	farsa	100	76.104	ENSNLEG00000012899	FARSA	98	76.104	Nomascus_leucogenys
ENSXETG00000007936	farsa	100	77.309	ENSMEUG00000014253	FARSA	100	77.309	Notamacropus_eugenii
ENSXETG00000007936	farsa	100	74.498	ENSOPRG00000005004	FARSA	98	74.498	Ochotona_princeps
ENSXETG00000007936	farsa	99	75.752	ENSODEG00000010433	FARSA	98	75.752	Octodon_degus
ENSXETG00000007936	farsa	100	79.920	ENSONIG00000008075	farsa	100	79.920	Oreochromis_niloticus
ENSXETG00000007936	farsa	100	78.313	ENSORLG00000016406	farsa	90	78.313	Oryzias_latipes
ENSXETG00000007936	farsa	100	78.514	ENSORLG00020021978	farsa	100	78.514	Oryzias_latipes_hni
ENSXETG00000007936	farsa	100	78.715	ENSORLG00015015045	farsa	100	78.715	Oryzias_latipes_hsok
ENSXETG00000007936	farsa	100	78.313	ENSOMEG00000017367	farsa	97	78.313	Oryzias_melastigma
ENSXETG00000007936	farsa	100	75.600	ENSOGAG00000012243	FARSA	98	75.600	Otolemur_garnettii
ENSXETG00000007936	farsa	100	76.104	ENSOARG00000009991	FARSA	92	76.104	Ovis_aries
ENSXETG00000007936	farsa	100	76.506	ENSPPAG00000034266	FARSA	98	76.506	Pan_paniscus
ENSXETG00000007936	farsa	100	76.707	ENSPPRG00000000346	FARSA	98	76.707	Panthera_pardus
ENSXETG00000007936	farsa	92	78.214	ENSPTIG00000011502	FARSA	94	78.214	Panthera_tigris_altaica
ENSXETG00000007936	farsa	100	76.506	ENSPTRG00000010550	FARSA	98	76.506	Pan_troglodytes
ENSXETG00000007936	farsa	100	76.305	ENSPANG00000010978	FARSA	98	71.687	Papio_anubis
ENSXETG00000007936	farsa	100	77.711	ENSPKIG00000007170	farsa	100	78.112	Paramormyrops_kingsleyae
ENSXETG00000007936	farsa	90	73.742	ENSPSIG00000012701	FARSA	98	75.501	Pelodiscus_sinensis
ENSXETG00000007936	farsa	100	73.494	ENSPMGG00000001401	farsa	100	73.494	Periophthalmus_magnuspinnatus
ENSXETG00000007936	farsa	96	76.569	ENSPEMG00000012560	Farsa	98	75.400	Peromyscus_maniculatus_bairdii
ENSXETG00000007936	farsa	100	75.703	ENSPMAG00000008453	farsa	100	75.703	Petromyzon_marinus
ENSXETG00000007936	farsa	100	77.309	ENSPCIG00000019294	FARSA	100	77.309	Phascolarctos_cinereus
ENSXETG00000007936	farsa	100	79.200	ENSPFOG00000001201	farsa	100	79.200	Poecilia_formosa
ENSXETG00000007936	farsa	100	79.200	ENSPLAG00000018191	farsa	100	79.200	Poecilia_latipinna
ENSXETG00000007936	farsa	100	79.400	ENSPMEG00000013547	farsa	100	79.400	Poecilia_mexicana
ENSXETG00000007936	farsa	100	74.000	ENSPREG00000013620	farsa	100	74.000	Poecilia_reticulata
ENSXETG00000007936	farsa	100	76.305	ENSPPYG00000009615	FARSA	98	76.305	Pongo_abelii
ENSXETG00000007936	farsa	100	76.104	ENSPCAG00000015721	FARSA	98	76.104	Procavia_capensis
ENSXETG00000007936	farsa	100	76.707	ENSPCOG00000014412	FARSA	98	76.707	Propithecus_coquereli
ENSXETG00000007936	farsa	86	82.407	ENSPVAG00000014714	FARSA	84	82.407	Pteropus_vampyrus
ENSXETG00000007936	farsa	100	79.920	ENSPNYG00000002144	farsa	100	79.920	Pundamilia_nyererei
ENSXETG00000007936	farsa	100	79.719	ENSPNAG00000000869	farsa	100	79.719	Pygocentrus_nattereri
ENSXETG00000007936	farsa	99	76.353	ENSRNOG00000003149	Farsa	98	76.353	Rattus_norvegicus
ENSXETG00000007936	farsa	100	76.506	ENSRBIG00000025585	FARSA	98	76.506	Rhinopithecus_bieti
ENSXETG00000007936	farsa	100	76.506	ENSRROG00000040046	FARSA	98	71.888	Rhinopithecus_roxellana
ENSXETG00000007936	farsa	93	50.317	YFL022C	FRS2	93	50.317	Saccharomyces_cerevisiae
ENSXETG00000007936	farsa	100	76.104	ENSSBOG00000031362	FARSA	98	76.104	Saimiri_boliviensis_boliviensis
ENSXETG00000007936	farsa	90	77.181	ENSSHAG00000015006	FARSA	100	77.181	Sarcophilus_harrisii
ENSXETG00000007936	farsa	100	77.510	ENSSFOG00015014864	farsa	100	77.510	Scleropages_formosus
ENSXETG00000007936	farsa	100	79.116	ENSSMAG00000002358	farsa	100	79.116	Scophthalmus_maximus
ENSXETG00000007936	farsa	100	78.313	ENSSDUG00000008631	farsa	100	78.313	Seriola_dumerili
ENSXETG00000007936	farsa	100	78.715	ENSSLDG00000017108	farsa	100	78.715	Seriola_lalandi_dorsalis
ENSXETG00000007936	farsa	67	88.235	ENSSARG00000006579	-	68	88.235	Sorex_araneus
ENSXETG00000007936	farsa	96	66.341	ENSSPUG00000012509	FARSA	99	67.679	Sphenodon_punctatus
ENSXETG00000007936	farsa	100	79.518	ENSSPAG00000018292	farsa	92	79.518	Stegastes_partitus
ENSXETG00000007936	farsa	100	75.904	ENSSSCG00000013745	FARSA	98	75.904	Sus_scrofa
ENSXETG00000007936	farsa	96	70.084	ENSTRUG00000010624	farsa	100	68.876	Takifugu_rubripes
ENSXETG00000007936	farsa	100	73.494	ENSTNIG00000008330	farsa	100	73.494	Tetraodon_nigroviridis
ENSXETG00000007936	farsa	90	73.438	ENSTBEG00000000396	FARSA	98	73.438	Tupaia_belangeri
ENSXETG00000007936	farsa	87	91.176	ENSTTRG00000003599	FARSA	85	91.176	Tursiops_truncatus
ENSXETG00000007936	farsa	100	76.104	ENSUAMG00000010230	FARSA	98	76.104	Ursus_americanus
ENSXETG00000007936	farsa	100	76.104	ENSUMAG00000006110	FARSA	98	76.104	Ursus_maritimus
ENSXETG00000007936	farsa	100	76.707	ENSVVUG00000024145	FARSA	98	76.707	Vulpes_vulpes
ENSXETG00000007936	farsa	100	70.459	ENSXCOG00000015512	farsa	100	70.459	Xiphophorus_couchianus
ENSXETG00000007936	farsa	100	78.400	ENSXMAG00000008832	farsa	100	78.400	Xiphophorus_maculatus