EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000007937 (Gene tree)
Gene ID: -
Gene Symbol: calr
Alias: -
Full Name: Xenopus tropicalis calreticulin (calr)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 6343 bases
Position: chrGL173084.1:629331-635673
Accession: NM_001001253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000017402	Calreticulin	PF00262.18	9.2e-82	1	2
ENSXETP00000017402	Calreticulin	PF00262.18	9.2e-82	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000017402	-	2399	-	ENSXETP00000017402	416 (aa)	-	Q6NVT6

Gene Model

Click here to download ENSXETG00000007937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000007937's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000007937	calr	69	34.985	ENSXETG00000014911	clgn	56	34.985
ENSXETG00000007937	calr	80	36.341	ENSXETG00000008408	canx	69	36.341
ENSXETG00000007937	calr	96	61.250	ENSXETG00000002832	calr3	87	64.246

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000007937	calr	91	75.989	ENSAMXG00000018577	-	86	76.099	Astyanax_mexicanus
ENSXETG00000007937	calr	84	81.897	ENSCAFG00000017093	CALR	89	79.834	Canis_familiaris
ENSXETG00000007937	calr	86	83.008	ENSCPBG00000023916	-	85	88.571	Chrysemys_picta_bellii
ENSXETG00000007937	calr	87	75.556	ENSDARG00000103979	calr3a	86	75.346	Danio_rerio
ENSXETG00000007937	calr	96	64.838	FBgn0005585	Calr	87	67.787	Drosophila_melanogaster
ENSXETG00000007937	calr	79	31.421	FBgn0264077	Cnx14D	62	32.161	Drosophila_melanogaster
ENSXETG00000007937	calr	88	70.572	ENSEBUG00000008568	calr3a	85	70.523	Eptatretus_burgeri
ENSXETG00000007937	calr	87	68.508	ENSELUG00000008294	-	86	68.320	Esox_lucius
ENSXETG00000007937	calr	91	68.814	ENSFHEG00000000123	-	86	69.003	Fundulus_heteroclitus
ENSXETG00000007937	calr	87	76.243	ENSMAMG00000003716	-	84	76.033	Mastacembelus_armatus
ENSXETG00000007937	calr	87	75.275	ENSMMOG00000020031	-	83	75.068	Mola_mola
ENSXETG00000007937	calr	83	83.237	ENSMLUG00000012776	-	86	82.073	Myotis_lucifugus
ENSXETG00000007937	calr	87	64.641	ENSORLG00000017171	-	84	64.738	Oryzias_latipes
ENSXETG00000007937	calr	87	75.691	ENSOMEG00000010424	-	85	75.758	Oryzias_melastigma
ENSXETG00000007937	calr	80	37.688	ENSPSIG00000003895	-	69	37.783	Pelodiscus_sinensis
ENSXETG00000007937	calr	80	36.709	ENSPSIG00000009344	-	61	36.896	Pelodiscus_sinensis
ENSXETG00000007937	calr	80	86.567	ENSPSIG00000012928	-	85	86.567	Pelodiscus_sinensis
ENSXETG00000007937	calr	87	74.586	ENSPNAG00000016813	-	86	74.380	Pygocentrus_nattereri
ENSXETG00000007937	calr	89	73.118	ENSSMAG00000005047	calr3a	83	65.470	Scophthalmus_maximus
ENSXETG00000007937	calr	69	39.193	ENSSLDG00000020527	-	61	39.193	Seriola_lalandi_dorsalis
ENSXETG00000007937	calr	87	77.348	ENSTRUG00000004597	-	84	77.135	Takifugu_rubripes
ENSXETG00000007937	calr	80	37.028	ENSTRUG00000003449	-	54	37.028	Takifugu_rubripes