EuRBPDB

Description
Ensembl ID
ENSXETG00000008060 (Gene tree)
Gene ID
-
Gene Symbol
prpf38a
Alias
-
Full Name
Xenopus tropicalis pre-mRNA processing factor 38A (prpf38a)%2C mRNA.
Gene Type
protein_coding
Species
Xenopus_tropicalis
Status
putative
Strand
Plus strand
Length
6878 bases
Position
chrGL172637.1:5525723-5532600
Accession
NM_001017140
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
ENSXETP00000052923PRP38PF03371.151.6e-6311
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
ENSXETT00000052923-1221-ENSXETP00000052923312 (aa)-Q28H87
Gene Model
Protein-Protein Interaction (PPI)
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
ENSXETG00000008060prpf38a10088.179ENSG00000134748PRPF38A10084.345Homo_sapiens
ENSXETG00000008060prpf38a7187.330ENSAPOG00000011652prpf38a10081.210Acanthochromis_polyacanthus
ENSXETG00000008060prpf38a10088.179ENSAMEG00000009319PRPF38A10084.345Ailuropoda_melanoleuca
ENSXETG00000008060prpf38a7185.520ENSACIG00000012292prpf38a7285.520Amphilophus_citrinellus
ENSXETG00000008060prpf38a7187.330ENSAOCG00000018004prpf38a10081.210Amphiprion_ocellaris
ENSXETG00000008060prpf38a7187.330ENSAPEG00000021414prpf38a10081.210Amphiprion_percula
ENSXETG00000008060prpf38a7186.425ENSATEG00000004608prpf38a10080.255Anabas_testudineus
ENSXETG00000008060prpf38a7987.097ENSAPLG00000005827PRPF38A9982.258Anas_platyrhynchos
ENSXETG00000008060prpf38a10087.540ENSACAG00000008249PRPF38A10083.706Anolis_carolinensis
ENSXETG00000008060prpf38a10061.514ENSANAG00000029204-10060.568Aotus_nancymaae
ENSXETG00000008060prpf38a10088.179ENSANAG00000027839PRPF38A10084.345Aotus_nancymaae
ENSXETG00000008060prpf38a7186.425ENSACLG00000021595prpf38a10080.573Astatotilapia_calliptera
ENSXETG00000008060prpf38a10079.299ENSAMXG00000029274prpf38a10080.892Astyanax_mexicanus
ENSXETG00000008060prpf38a10088.179ENSBTAG00000002720PRPF38A10084.345Bos_taurus
ENSXETG00000008060prpf38a6363.590WBGene00008380prp-385965.426Caenorhabditis_elegans
ENSXETG00000008060prpf38a10088.179ENSCJAG00000021594PRPF38A10084.345Callithrix_jacchus
ENSXETG00000008060prpf38a10088.179ENSCAFG00000003740PRPF38A10084.345Canis_familiaris
ENSXETG00000008060prpf38a10088.179ENSCAFG00020010939PRPF38A10084.345Canis_lupus_dingo
ENSXETG00000008060prpf38a10088.179ENSCHIG00000024730PRPF38A10084.345Capra_hircus
ENSXETG00000008060prpf38a10088.179ENSTSYG00000009868-10084.345Carlito_syrichta
ENSXETG00000008060prpf38a8685.556ENSTSYG00000031994-9581.111Carlito_syrichta
ENSXETG00000008060prpf38a10088.179ENSCPOG00000005079PRPF38A10084.345Cavia_porcellus
ENSXETG00000008060prpf38a10087.220ENSCCAG00000026502PRPF38A10083.387Cebus_capucinus
ENSXETG00000008060prpf38a10059.936ENSCATG00000044190-5757.447Cercocebus_atys
ENSXETG00000008060prpf38a10088.179ENSCATG00000032296PRPF38A10084.345Cercocebus_atys
ENSXETG00000008060prpf38a10088.179ENSCLAG00000005816PRPF38A10084.345Chinchilla_lanigera
ENSXETG00000008060prpf38a7894.792ENSCHOG00000008388PRPF38A7794.792Choloepus_hoffmanni
ENSXETG00000008060prpf38a10088.498ENSCPBG00000014791PRPF38A10084.665Chrysemys_picta_bellii
ENSXETG00000008060prpf38a7469.130ENSCSAVG00000009580-6275.532Ciona_savignyi
ENSXETG00000008060prpf38a7490.043ENSCANG00000032608PRPF38A7490.950Colobus_angolensis_palliatus
ENSXETG00000008060prpf38a7476.623ENSCGRG00001002557-7477.828Cricetulus_griseus_chok1gshd
ENSXETG00000008060prpf38a10088.179ENSCGRG00001018502-10084.345Cricetulus_griseus_chok1gshd
ENSXETG00000008060prpf38a10088.179ENSCGRG00000014868Prpf38a10084.345Cricetulus_griseus_crigri
ENSXETG00000008060prpf38a7187.330ENSCSEG00000001269prpf38a7687.330Cynoglossus_semilaevis
ENSXETG00000008060prpf38a7187.783ENSCVAG00000012305prpf38a10080.892Cyprinodon_variegatus
ENSXETG00000008060prpf38a10076.433ENSDARG00000039213prpf38a10081.210Danio_rerio
ENSXETG00000008060prpf38a10088.179ENSDNOG00000042326PRPF38A10084.345Dasypus_novemcinctus
ENSXETG00000008060prpf38a8596.875ENSDORG00000023857-10096.875Dipodomys_ordii
ENSXETG00000008060prpf38a8474.525ENSDORG00000025371-7679.909Dipodomys_ordii
ENSXETG00000008060prpf38a8474.525ENSDORG00000023691-7679.909Dipodomys_ordii
ENSXETG00000008060prpf38a6473.134FBgn0050342Prp385774.468Drosophila_melanogaster
ENSXETG00000008060prpf38a9975.080ENSEBUG00000012588prpf38a7179.821Eptatretus_burgeri
ENSXETG00000008060prpf38a10088.179ENSEASG00005014427PRPF38A10084.345Equus_asinus_asinus
ENSXETG00000008060prpf38a10088.179ENSECAG00000022628PRPF38A10084.345Equus_caballus
ENSXETG00000008060prpf38a7182.805ENSELUG00000021094prpf38a10078.981Esox_lucius
ENSXETG00000008060prpf38a10088.179ENSFCAG00000002518PRPF38A10084.345Felis_catus
ENSXETG00000008060prpf38a8787.868ENSFALG00000005598-10083.456Ficedula_albicollis
ENSXETG00000008060prpf38a9980.449ENSFALG00000003612-9978.205Ficedula_albicollis
ENSXETG00000008060prpf38a10087.859ENSFDAG00000011287PRPF38A10084.026Fukomys_damarensis
ENSXETG00000008060prpf38a9174.476ENSFHEG00000014317prpf38a7586.878Fundulus_heteroclitus
ENSXETG00000008060prpf38a5391.566ENSGMOG00000011384prpf38a5491.566Gadus_morhua
ENSXETG00000008060prpf38a10089.457ENSGALG00000010627PRPF38A10085.623Gallus_gallus
ENSXETG00000008060prpf38a9278.125ENSGAFG00000012422prpf38a10081.210Gambusia_affinis
ENSXETG00000008060prpf38a7184.753ENSGACG00000005423prpf38a10079.114Gasterosteus_aculeatus
ENSXETG00000008060prpf38a10088.498ENSGAGG00000020547PRPF38A10084.665Gopherus_agassizii
ENSXETG00000008060prpf38a10088.179ENSGGOG00000003940PRPF38A10084.345Gorilla_gorilla
ENSXETG00000008060prpf38a6191.005ENSHBUG00000020572prpf38a8090.957Haplochromis_burtoni
ENSXETG00000008060prpf38a10077.244ENSHGLG00000007918-10074.679Heterocephalus_glaber_female
ENSXETG00000008060prpf38a10088.179ENSHGLG00000000475PRPF38A10084.345Heterocephalus_glaber_female
ENSXETG00000008060prpf38a10088.179ENSHGLG00100008935PRPF38A10084.345Heterocephalus_glaber_male
ENSXETG00000008060prpf38a10077.244ENSHGLG00100003928-10074.679Heterocephalus_glaber_male
ENSXETG00000008060prpf38a8767.279ENSHCOG00000020781prpf38a5988.298Hippocampus_comes
ENSXETG00000008060prpf38a7486.638ENSIPUG00000005757prpf38a7186.036Ictalurus_punctatus
ENSXETG00000008060prpf38a10088.179ENSSTOG00000015610PRPF38A10084.345Ictidomys_tridecemlineatus
ENSXETG00000008060prpf38a10088.179ENSJJAG00000015811Prpf38a10084.345Jaculus_jaculus
ENSXETG00000008060prpf38a7187.783ENSKMAG00000006588prpf38a10080.892Kryptolebias_marmoratus
ENSXETG00000008060prpf38a9673.913ENSLBEG00000020585prpf38a10078.981Labrus_bergylta
ENSXETG00000008060prpf38a10085.623ENSLACG00000011495PRPF38A10083.387Latimeria_chalumnae
ENSXETG00000008060prpf38a10076.752ENSLOCG00000006262prpf38a10080.892Lepisosteus_oculatus
ENSXETG00000008060prpf38a10088.179ENSLAFG00000025862PRPF38A10084.345Loxodonta_africana
ENSXETG00000008060prpf38a10088.179ENSMFAG00000039449PRPF38A10084.345Macaca_fascicularis
ENSXETG00000008060prpf38a8786.397ENSMMUG00000014333PRPF38A9881.685Macaca_mulatta
ENSXETG00000008060prpf38a10061.218ENSMNEG00000040242-5759.043Macaca_nemestrina
ENSXETG00000008060prpf38a10088.179ENSMNEG00000031221PRPF38A10084.345Macaca_nemestrina
ENSXETG00000008060prpf38a10088.179ENSMLEG00000041105PRPF38A10084.345Mandrillus_leucophaeus
ENSXETG00000008060prpf38a7187.330ENSMAMG00000015431prpf38a10081.210Mastacembelus_armatus
ENSXETG00000008060prpf38a7186.425ENSMZEG00005017838prpf38a10080.573Maylandia_zebra
ENSXETG00000008060prpf38a7491.342ENSMGAG00000011176PRPF38A7492.308Meleagris_gallopavo
ENSXETG00000008060prpf38a8579.623ENSMAUG00000018029-8485.973Mesocricetus_auratus
ENSXETG00000008060prpf38a10088.179ENSMICG00000014193PRPF38A10084.345Microcebus_murinus
ENSXETG00000008060prpf38a10088.179ENSMOCG00000013080Prpf38a10084.345Microtus_ochrogaster
ENSXETG00000008060prpf38a7286.726ENSMMOG00000016972prpf38a7886.878Mola_mola
ENSXETG00000008060prpf38a10087.261ENSMODG00000000644PRPF38A10083.439Monodelphis_domestica
ENSXETG00000008060prpf38a7186.878ENSMALG00000019363prpf38a9780.892Monopterus_albus
ENSXETG00000008060prpf38a10087.859MGP_CAROLIEiJ_G0026269Prpf38a10084.026Mus_caroli
ENSXETG00000008060prpf38a10087.859ENSMUSG00000063800Prpf38a10084.026Mus_musculus
ENSXETG00000008060prpf38a10087.859MGP_PahariEiJ_G0028602Prpf38a10084.026Mus_pahari
ENSXETG00000008060prpf38a10087.540MGP_SPRETEiJ_G0027238Prpf38a9392.553Mus_spretus
ENSXETG00000008060prpf38a10088.179ENSMPUG00000006896PRPF38A10084.345Mustela_putorius_furo
ENSXETG00000008060prpf38a10088.498ENSNGAG00000011884Prpf38a10084.345Nannospalax_galili
ENSXETG00000008060prpf38a7185.068ENSNBRG00000004013prpf38a7185.068Neolamprologus_brichardi
ENSXETG00000008060prpf38a10059.744ENSNLEG00000033398-9455.591Nomascus_leucogenys
ENSXETG00000008060prpf38a9767.327ENSNLEG00000012592-9966.337Nomascus_leucogenys
ENSXETG00000008060prpf38a9387.586ENSNLEG00000017999PRPF38A9383.448Nomascus_leucogenys
ENSXETG00000008060prpf38a10084.665ENSMEUG00000003860PRPF38A10080.831Notamacropus_eugenii
ENSXETG00000008060prpf38a7390.351ENSOPRG00000008985PRPF38A9290.950Ochotona_princeps
ENSXETG00000008060prpf38a10088.179ENSODEG00000005869PRPF38A10084.345Octodon_degus
ENSXETG00000008060prpf38a7185.520ENSONIG00000007816prpf38a10079.936Oreochromis_niloticus
ENSXETG00000008060prpf38a10060.635ENSOANG00000009541-10059.683Ornithorhynchus_anatinus
ENSXETG00000008060prpf38a10088.179ENSOCUG00000000963PRPF38A10084.345Oryctolagus_cuniculus
ENSXETG00000008060prpf38a9680.731ENSORLG00000013485prpf38a9981.150Oryzias_latipes
ENSXETG00000008060prpf38a9680.731ENSORLG00020002130prpf38a9981.150Oryzias_latipes_hni
ENSXETG00000008060prpf38a9680.399ENSORLG00015021393prpf38a9980.831Oryzias_latipes_hsok
ENSXETG00000008060prpf38a9677.258ENSOMEG00000016333prpf38a10080.573Oryzias_melastigma
ENSXETG00000008060prpf38a10088.179ENSOGAG00000005423PRPF38A10084.345Otolemur_garnettii
ENSXETG00000008060prpf38a10088.179ENSOARG00000005373PRPF38A10084.345Ovis_aries
ENSXETG00000008060prpf38a10088.179ENSPPAG00000030905PRPF38A10084.345Pan_paniscus
ENSXETG00000008060prpf38a10072.524ENSPPAG00000033867-10066.773Pan_paniscus
ENSXETG00000008060prpf38a10088.179ENSPPRG00000013268PRPF38A10084.345Panthera_pardus
ENSXETG00000008060prpf38a10088.179ENSPTIG00000015419PRPF38A10084.345Panthera_tigris_altaica
ENSXETG00000008060prpf38a10088.179ENSPTRG00000000739PRPF38A10084.345Pan_troglodytes
ENSXETG00000008060prpf38a10088.179ENSPANG00000015483PRPF38A10084.345Papio_anubis
ENSXETG00000008060prpf38a10075.719ENSPKIG00000011439prpf38a10080.192Paramormyrops_kingsleyae
ENSXETG00000008060prpf38a10088.498ENSPSIG00000017487PRPF38A10084.665Pelodiscus_sinensis
ENSXETG00000008060prpf38a8278.988ENSPMGG00000021352prpf38a7686.878Periophthalmus_magnuspinnatus
ENSXETG00000008060prpf38a10079.430ENSPEMG00000011212-10078.481Peromyscus_maniculatus_bairdii
ENSXETG00000008060prpf38a10088.179ENSPEMG00000023277-10084.345Peromyscus_maniculatus_bairdii
ENSXETG00000008060prpf38a10086.943ENSPCIG00000022369-10083.121Phascolarctos_cinereus
ENSXETG00000008060prpf38a8383.784ENSPFOG00000004248prpf38a10081.529Poecilia_formosa
ENSXETG00000008060prpf38a9275.172ENSPLAG00000010328prpf38a10081.210Poecilia_latipinna
ENSXETG00000008060prpf38a9275.172ENSPMEG00000011804prpf38a10081.210Poecilia_mexicana
ENSXETG00000008060prpf38a6091.489ENSPREG00000002835prpf38a5891.489Poecilia_reticulata
ENSXETG00000008060prpf38a10080.189ENSPPYG00000001348PRPF38A10076.415Pongo_abelii
ENSXETG00000008060prpf38a10088.498ENSPCAG00000013328PRPF38A10084.665Procavia_capensis
ENSXETG00000008060prpf38a10070.192ENSPCOG00000020709-7375.000Propithecus_coquereli
ENSXETG00000008060prpf38a10088.179ENSPCOG00000016387-10084.345Propithecus_coquereli
ENSXETG00000008060prpf38a10088.179ENSPVAG00000009803PRPF38A10084.345Pteropus_vampyrus
ENSXETG00000008060prpf38a7186.425ENSPNYG00000005571prpf38a10080.573Pundamilia_nyererei
ENSXETG00000008060prpf38a10079.936ENSPNAG00000010399prpf38a10081.529Pygocentrus_nattereri
ENSXETG00000008060prpf38a10088.498ENSRNOG00000009451Prpf38a10084.665Rattus_norvegicus
ENSXETG00000008060prpf38a10088.179ENSRBIG00000036442PRPF38A10084.345Rhinopithecus_bieti
ENSXETG00000008060prpf38a10088.179ENSRROG00000032788PRPF38A10084.345Rhinopithecus_roxellana
ENSXETG00000008060prpf38a9870.358ENSRROG00000040003-9969.055Rhinopithecus_roxellana
ENSXETG00000008060prpf38a10088.179ENSSBOG00000019515PRPF38A10084.345Saimiri_boliviensis_boliviensis
ENSXETG00000008060prpf38a9666.556ENSSHAG00000006029-7478.281Sarcophilus_harrisii
ENSXETG00000008060prpf38a8785.294ENSSHAG00000006906-10080.882Sarcophilus_harrisii
ENSXETG00000008060prpf38a10075.949ENSSFOG00015013572prpf38a10079.936Scleropages_formosus
ENSXETG00000008060prpf38a7186.425ENSSMAG00000015379prpf38a9979.808Scophthalmus_maximus
ENSXETG00000008060prpf38a7186.425ENSSDUG00000001324prpf38a10080.573Seriola_dumerili
ENSXETG00000008060prpf38a7186.425ENSSLDG00000014803prpf38a10080.573Seriola_lalandi_dorsalis
ENSXETG00000008060prpf38a10071.565ENSSARG00000014458PRPF38A10067.732Sorex_araneus
ENSXETG00000008060prpf38a10087.859ENSSPUG00000013259PRPF38A10084.026Sphenodon_punctatus
ENSXETG00000008060prpf38a7170.136ENSSPAG00000010449prpf38a6870.136Stegastes_partitus
ENSXETG00000008060prpf38a10088.179ENSSSCG00000028288PRPF38A10084.345Sus_scrofa
ENSXETG00000008060prpf38a10085.623ENSTGUG00000008995PRPF38A10081.789Taeniopygia_guttata
ENSXETG00000008060prpf38a7187.330ENSTRUG00000003374prpf38a6887.330Takifugu_rubripes
ENSXETG00000008060prpf38a7186.547ENSTNIG00000005533prpf38a10080.380Tetraodon_nigroviridis
ENSXETG00000008060prpf38a10087.540ENSTBEG00000000725PRPF38A10083.706Tupaia_belangeri
ENSXETG00000008060prpf38a10088.179ENSTTRG00000016139PRPF38A10084.345Tursiops_truncatus
ENSXETG00000008060prpf38a10088.179ENSUAMG00000000625PRPF38A10084.345Ursus_americanus
ENSXETG00000008060prpf38a10088.179ENSUMAG00000022674PRPF38A10084.345Ursus_maritimus
ENSXETG00000008060prpf38a7489.610ENSVPAG00000000907PRPF38A10078.594Vicugna_pacos
ENSXETG00000008060prpf38a10088.179ENSVVUG00000004475PRPF38A10084.345Vulpes_vulpes
ENSXETG00000008060prpf38a7186.099ENSXCOG00000007393prpf38a7486.099Xiphophorus_couchianus
ENSXETG00000008060prpf38a7188.235ENSXMAG00000026143prpf38a10081.210Xiphophorus_maculatus