EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000008079 (Gene tree)
Gene ID: -
Gene Symbol: esf1
Alias: -
Full Name: Xenopus tropicalis ESF1 nucleolar pre-rRNA processing protein homolog (esf1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 26019 bases
Position: chrGL172644.1:1823233-1849251
Accession: NM_001103068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000017705	NUC153	PF08159.12	2.2e-13	1	1
ENSXETP00000017703	NUC153	PF08159.12	2.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000017703	-	2472	XM_012962641	ENSXETP00000017703	809 (aa)	XP_012818095	F7A0S2
ENSXETT00000017705	-	2466	-	ENSXETP00000017705	807 (aa)	-	F7A0R4

Gene Model

Click here to download ENSXETG00000008079's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000008079's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000008079	esf1	100	55.275	ENSG00000089048	ESF1	74	71.681	Homo_sapiens
ENSXETG00000008079	esf1	63	50.466	ENSAPOG00000003004	esf1	99	51.493	Acanthochromis_polyacanthus
ENSXETG00000008079	esf1	100	55.081	ENSAMEG00000008830	ESF1	65	65.317	Ailuropoda_melanoleuca
ENSXETG00000008079	esf1	81	69.333	ENSACIG00000018305	esf1	90	68.919	Amphilophus_citrinellus
ENSXETG00000008079	esf1	80	70.130	ENSAOCG00000006033	esf1	88	68.919	Amphiprion_ocellaris
ENSXETG00000008079	esf1	80	70.130	ENSAPEG00000022385	esf1	88	68.919	Amphiprion_percula
ENSXETG00000008079	esf1	100	56.140	ENSAPLG00000012113	ESF1	66	66.961	Anas_platyrhynchos
ENSXETG00000008079	esf1	100	55.940	ENSACAG00000000963	ESF1	66	63.841	Anolis_carolinensis
ENSXETG00000008079	esf1	100	56.366	ENSANAG00000036778	ESF1	65	64.841	Aotus_nancymaae
ENSXETG00000008079	esf1	79	62.821	ENSAMXG00000001172	esf1	85	63.889	Astyanax_mexicanus
ENSXETG00000008079	esf1	70	66.550	ENSBTAG00000007130	ESF1	65	65.845	Bos_taurus
ENSXETG00000008079	esf1	100	56.047	ENSCJAG00000004640	ESF1	65	64.664	Callithrix_jacchus
ENSXETG00000008079	esf1	80	61.286	ENSCAFG00000005587	ESF1	65	65.493	Canis_familiaris
ENSXETG00000008079	esf1	80	61.286	ENSCAFG00020027530	ESF1	65	65.493	Canis_lupus_dingo
ENSXETG00000008079	esf1	100	57.920	ENSCHIG00000021188	ESF1	67	65.724	Capra_hircus
ENSXETG00000008079	esf1	100	51.534	ENSCAPG00000010466	-	77	78.378	Cavia_aperea
ENSXETG00000008079	esf1	79	77.778	ENSCAPG00000010333	-	78	59.612	Cavia_aperea
ENSXETG00000008079	esf1	100	53.712	ENSCPOG00000014027	-	66	65.901	Cavia_porcellus
ENSXETG00000008079	esf1	100	55.081	ENSCCAG00000024521	ESF1	65	64.664	Cebus_capucinus
ENSXETG00000008079	esf1	70	65.317	ENSCATG00000042792	ESF1	65	65.018	Cercocebus_atys
ENSXETG00000008079	esf1	100	56.667	ENSCLAG00000013266	-	66	65.901	Chinchilla_lanigera
ENSXETG00000008079	esf1	70	65.669	ENSCSAG00000011777	ESF1	65	65.018	Chlorocebus_sabaeus
ENSXETG00000008079	esf1	76	49.254	ENSCING00000020446	-	89	48.485	Ciona_intestinalis
ENSXETG00000008079	esf1	74	48.485	ENSCSAVG00000009015	-	87	47.692	Ciona_savignyi
ENSXETG00000008079	esf1	70	65.729	ENSCANG00000030674	ESF1	65	65.018	Colobus_angolensis_palliatus
ENSXETG00000008079	esf1	70	66.725	ENSCGRG00001018257	Esf1	66	66.195	Cricetulus_griseus_chok1gshd
ENSXETG00000008079	esf1	78	66.154	ENSCVAG00000007894	esf1	91	59.459	Cyprinodon_variegatus
ENSXETG00000008079	esf1	70	65.554	ENSDNOG00000019409	ESF1	65	65.256	Dasypus_novemcinctus
ENSXETG00000008079	esf1	70	67.254	ENSDORG00000016313	Esf1	66	66.784	Dipodomys_ordii
ENSXETG00000008079	esf1	78	50.000	FBgn0024364	CG11417	83	50.000	Drosophila_melanogaster
ENSXETG00000008079	esf1	68	80.556	ENSETEG00000004471	ESF1	64	81.081	Echinops_telfairi
ENSXETG00000008079	esf1	70	49.832	ENSEBUG00000015161	esf1	87	49.493	Eptatretus_burgeri
ENSXETG00000008079	esf1	64	52.632	ENSEEUG00000015837	-	70	60.000	Erinaceus_europaeus
ENSXETG00000008079	esf1	69	54.455	ENSELUG00000000408	esf1	73	54.828	Esox_lucius
ENSXETG00000008079	esf1	70	65.499	ENSFCAG00000000919	ESF1	65	64.789	Felis_catus
ENSXETG00000008079	esf1	70	66.314	ENSFALG00000010914	ESF1	65	66.138	Ficedula_albicollis
ENSXETG00000008079	esf1	100	57.210	ENSFDAG00000014777	ESF1	67	65.780	Fukomys_damarensis
ENSXETG00000008079	esf1	63	57.087	ENSFHEG00000014984	esf1	99	57.558	Fundulus_heteroclitus
ENSXETG00000008079	esf1	70	67.434	ENSGALG00000034768	ESF1	65	67.434	Gallus_gallus
ENSXETG00000008079	esf1	79	58.108	ENSGAFG00000000540	esf1	90	58.108	Gambusia_affinis
ENSXETG00000008079	esf1	100	55.161	ENSGGOG00000006692	ESF1	65	64.311	Gorilla_gorilla
ENSXETG00000008079	esf1	79	64.103	ENSIPUG00000006507	esf1	76	56.711	Ictalurus_punctatus
ENSXETG00000008079	esf1	70	57.264	ENSLOCG00000015979	esf1	73	58.319	Lepisosteus_oculatus
ENSXETG00000008079	esf1	100	58.680	ENSLAFG00000005479	ESF1	70	65.263	Loxodonta_africana
ENSXETG00000008079	esf1	70	65.669	ENSMFAG00000036841	ESF1	65	65.018	Macaca_fascicularis
ENSXETG00000008079	esf1	70	65.669	ENSMNEG00000044042	ESF1	65	65.018	Macaca_nemestrina
ENSXETG00000008079	esf1	70	65.669	ENSMLEG00000037121	ESF1	65	65.018	Mandrillus_leucophaeus
ENSXETG00000008079	esf1	82	68.919	ENSMAMG00000018648	esf1	89	68.919	Mastacembelus_armatus
ENSXETG00000008079	esf1	63	57.617	ENSMZEG00005013912	esf1	99	57.310	Maylandia_zebra
ENSXETG00000008079	esf1	100	57.126	ENSMGAG00000004291	ESF1	66	68.142	Meleagris_gallopavo
ENSXETG00000008079	esf1	75	65.686	ENSMAUG00000015975	Esf1	66	67.199	Mesocricetus_auratus
ENSXETG00000008079	esf1	100	56.651	ENSMOCG00000005902	Esf1	67	64.903	Microtus_ochrogaster
ENSXETG00000008079	esf1	63	53.346	ENSMMOG00000018693	esf1	99	55.388	Mola_mola
ENSXETG00000008079	esf1	100	57.838	ENSMODG00000005066	ESF1	67	63.908	Monodelphis_domestica
ENSXETG00000008079	esf1	69	75.000	MGP_SPRETEiJ_G0025285	Esf1	69	75.676	Mus_spretus
ENSXETG00000008079	esf1	70	66.140	ENSMPUG00000001450	ESF1	65	65.432	Mustela_putorius_furo
ENSXETG00000008079	esf1	70	65.849	ENSMLUG00000013080	ESF1	65	65.317	Myotis_lucifugus
ENSXETG00000008079	esf1	70	63.845	ENSNLEG00000014563	ESF1	64	64.198	Nomascus_leucogenys
ENSXETG00000008079	esf1	56	71.483	ENSOPRG00000004862	ESF1	90	71.483	Ochotona_princeps
ENSXETG00000008079	esf1	100	57.160	ENSODEG00000006824	ESF1	68	66.197	Octodon_degus
ENSXETG00000008079	esf1	83	68.831	ENSONIG00000006804	esf1	92	57.886	Oreochromis_niloticus
ENSXETG00000008079	esf1	70	65.734	ENSOANG00000008432	-	66	65.789	Ornithorhynchus_anatinus
ENSXETG00000008079	esf1	100	56.824	ENSOCUG00000005414	ESF1	66	63.448	Oryctolagus_cuniculus
ENSXETG00000008079	esf1	62	53.933	ENSORLG00000018625	esf1	99	53.846	Oryzias_latipes
ENSXETG00000008079	esf1	79	66.667	ENSORLG00015022826	esf1	91	64.865	Oryzias_latipes_hsok
ENSXETG00000008079	esf1	62	55.618	ENSOMEG00000009311	esf1	99	55.805	Oryzias_melastigma
ENSXETG00000008079	esf1	100	57.801	ENSOGAG00000016912	ESF1	67	63.492	Otolemur_garnettii
ENSXETG00000008079	esf1	70	66.491	ENSOARG00000011158	ESF1	63	65.785	Ovis_aries
ENSXETG00000008079	esf1	76	60.374	ENSPPAG00000024379	ESF1	65	64.311	Pan_paniscus
ENSXETG00000008079	esf1	70	65.324	ENSPPRG00000012007	ESF1	65	64.789	Panthera_pardus
ENSXETG00000008079	esf1	70	65.324	ENSPTIG00000020063	ESF1	65	64.789	Panthera_tigris_altaica
ENSXETG00000008079	esf1	70	64.789	ENSPTRG00000013258	ESF1	65	64.488	Pan_troglodytes
ENSXETG00000008079	esf1	70	57.778	ENSPKIG00000024448	esf1	69	59.625	Paramormyrops_kingsleyae
ENSXETG00000008079	esf1	100	57.851	ENSPCIG00000019331	ESF1	67	65.317	Phascolarctos_cinereus
ENSXETG00000008079	esf1	99	47.059	ENSPFOG00000010101	esf1	88	58.108	Poecilia_formosa
ENSXETG00000008079	esf1	63	55.106	ENSPLAG00000006452	esf1	99	54.932	Poecilia_latipinna
ENSXETG00000008079	esf1	80	59.459	ENSPMEG00000000713	esf1	89	59.459	Poecilia_mexicana
ENSXETG00000008079	esf1	84	58.108	ENSPREG00000004431	esf1	86	58.108	Poecilia_reticulata
ENSXETG00000008079	esf1	70	65.256	ENSPPYG00000010715	ESF1	65	64.956	Pongo_abelii
ENSXETG00000008079	esf1	92	60.123	ENSPCAG00000006881	ESF1	75	82.432	Procavia_capensis
ENSXETG00000008079	esf1	79	79.167	ENSPVAG00000001295	ESF1	74	79.730	Pteropus_vampyrus
ENSXETG00000008079	esf1	70	54.424	ENSPNAG00000014721	esf1	75	56.522	Pygocentrus_nattereri
ENSXETG00000008079	esf1	70	65.493	ENSRBIG00000035763	ESF1	65	64.841	Rhinopithecus_bieti
ENSXETG00000008079	esf1	70	65.669	ENSRROG00000032022	ESF1	65	65.018	Rhinopithecus_roxellana
ENSXETG00000008079	esf1	58	33.004	YDR365C	-	72	33.792	Saccharomyces_cerevisiae
ENSXETG00000008079	esf1	100	61.322	ENSSHAG00000000449	ESF1	70	67.611	Sarcophilus_harrisii
ENSXETG00000008079	esf1	80	72.973	ENSSDUG00000019460	esf1	92	72.973	Seriola_dumerili
ENSXETG00000008079	esf1	100	58.486	ENSSPUG00000012635	ESF1	69	65.785	Sphenodon_punctatus
ENSXETG00000008079	esf1	100	54.977	ENSSSCG00000007077	ESF1	65	64.965	Sus_scrofa
ENSXETG00000008079	esf1	79	68.056	ENSTGUG00000002450	ESF1	73	67.568	Taeniopygia_guttata
ENSXETG00000008079	esf1	90	67.532	ENSTRUG00000009445	esf1	88	68.056	Takifugu_rubripes
ENSXETG00000008079	esf1	57	83.333	ENSTBEG00000008552	ESF1	60	84.375	Tupaia_belangeri
ENSXETG00000008079	esf1	70	66.140	ENSVVUG00000014318	ESF1	61	65.493	Vulpes_vulpes
ENSXETG00000008079	esf1	82	59.459	ENSXMAG00000017651	esf1	88	59.459	Xiphophorus_maculatus