EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000008413 (Gene tree)
Gene ID: -
Gene Symbol: larp1
Alias: -
Full Name: Xenopus tropicalis La ribonucleoprotein domain family member 1 (larp1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 44083 bases
Position: chrGL172660.1:4127283-4171365
Accession: NM_001142193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000018431	La	PF05383.17	4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000018431	-	5780	XM_012958714	ENSXETP00000018431	1013 (aa)	XP_012814168	F7DHI9

Gene Model

Click here to download ENSXETG00000008413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000008413's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000008413	larp1	94	51.829	ENSXETG00000022512	larp1b	95	52.236

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000008413	larp1	90	75.630	ENSG00000155506	LARP1	90	90.303	Homo_sapiens
ENSXETG00000008413	larp1	86	86.256	ENSAPOG00000020685	larp1	91	86.256	Acanthochromis_polyacanthus
ENSXETG00000008413	larp1	91	75.938	ENSAMEG00000016673	LARP1	99	75.938	Ailuropoda_melanoleuca
ENSXETG00000008413	larp1	97	66.533	ENSACIG00000012994	larp1	92	65.968	Amphilophus_citrinellus
ENSXETG00000008413	larp1	81	73.467	ENSAOCG00000007792	larp1	98	73.554	Amphiprion_ocellaris
ENSXETG00000008413	larp1	99	67.787	ENSAPEG00000022246	larp1	93	70.198	Amphiprion_percula
ENSXETG00000008413	larp1	92	69.864	ENSATEG00000013523	larp1	92	67.347	Anabas_testudineus
ENSXETG00000008413	larp1	85	81.096	ENSAPLG00000007559	LARP1	100	81.655	Anas_platyrhynchos
ENSXETG00000008413	larp1	92	77.505	ENSACAG00000004071	LARP1	99	79.599	Anolis_carolinensis
ENSXETG00000008413	larp1	90	75.920	ENSANAG00000029949	LARP1	99	73.613	Aotus_nancymaae
ENSXETG00000008413	larp1	93	71.125	ENSACLG00000015256	larp1	98	70.885	Astatotilapia_calliptera
ENSXETG00000008413	larp1	98	68.966	ENSAMXG00000000859	larp1	91	73.602	Astyanax_mexicanus
ENSXETG00000008413	larp1	94	75.730	ENSBTAG00000008443	LARP1	91	75.374	Bos_taurus
ENSXETG00000008413	larp1	91	76.883	ENSCJAG00000004454	LARP1	93	76.155	Callithrix_jacchus
ENSXETG00000008413	larp1	91	75.938	ENSCAFG00000017639	LARP1	99	75.938	Canis_familiaris
ENSXETG00000008413	larp1	86	76.386	ENSCAFG00020023860	LARP1	99	76.386	Canis_lupus_dingo
ENSXETG00000008413	larp1	94	75.327	ENSCHIG00000014414	LARP1	92	73.689	Capra_hircus
ENSXETG00000008413	larp1	91	75.704	ENSTSYG00000013732	LARP1	99	73.041	Carlito_syrichta
ENSXETG00000008413	larp1	80	76.639	ENSCAPG00000013865	LARP1	86	76.478	Cavia_aperea
ENSXETG00000008413	larp1	88	77.983	ENSCPOG00000003377	LARP1	96	77.983	Cavia_porcellus
ENSXETG00000008413	larp1	94	75.202	ENSCCAG00000025201	LARP1	93	76.050	Cebus_capucinus
ENSXETG00000008413	larp1	94	72.543	ENSCATG00000030675	LARP1	93	75.971	Cercocebus_atys
ENSXETG00000008413	larp1	88	77.983	ENSCLAG00000012755	LARP1	96	75.870	Chinchilla_lanigera
ENSXETG00000008413	larp1	85	73.655	ENSCSAG00000010800	LARP1	99	73.796	Chlorocebus_sabaeus
ENSXETG00000008413	larp1	84	73.628	ENSCHOG00000012716	LARP1	88	73.476	Choloepus_hoffmanni
ENSXETG00000008413	larp1	95	80.513	ENSCPBG00000002173	LARP1	94	81.277	Chrysemys_picta_bellii
ENSXETG00000008413	larp1	90	75.815	ENSCANG00000037418	LARP1	93	75.945	Colobus_angolensis_palliatus
ENSXETG00000008413	larp1	95	75.050	ENSCGRG00001016913	Larp1	94	74.334	Cricetulus_griseus_chok1gshd
ENSXETG00000008413	larp1	88	73.370	ENSCGRG00000009916	Larp1	99	73.370	Cricetulus_griseus_crigri
ENSXETG00000008413	larp1	92	72.062	ENSCSEG00000016431	larp1	93	70.418	Cynoglossus_semilaevis
ENSXETG00000008413	larp1	99	66.511	ENSCVAG00000022687	larp1	90	69.939	Cyprinodon_variegatus
ENSXETG00000008413	larp1	98	67.428	ENSDARG00000101722	larp1	96	69.095	Danio_rerio
ENSXETG00000008413	larp1	94	74.398	ENSDNOG00000012073	LARP1	91	73.451	Dasypus_novemcinctus
ENSXETG00000008413	larp1	91	72.832	ENSDORG00000002897	Larp1	98	73.145	Dipodomys_ordii
ENSXETG00000008413	larp1	84	78.054	ENSETEG00000020251	LARP1	100	78.054	Echinops_telfairi
ENSXETG00000008413	larp1	94	74.925	ENSEASG00005001070	LARP1	91	74.479	Equus_asinus_asinus
ENSXETG00000008413	larp1	91	76.747	ENSECAG00000017002	LARP1	70	76.874	Equus_caballus
ENSXETG00000008413	larp1	89	70.563	ENSEEUG00000001065	LARP1	99	70.988	Erinaceus_europaeus
ENSXETG00000008413	larp1	93	71.136	ENSELUG00000019403	larp1	90	71.341	Esox_lucius
ENSXETG00000008413	larp1	94	75.426	ENSFCAG00000000592	LARP1	96	73.490	Felis_catus
ENSXETG00000008413	larp1	81	81.499	ENSFALG00000008335	LARP1	99	79.831	Ficedula_albicollis
ENSXETG00000008413	larp1	88	78.176	ENSFDAG00000021125	LARP1	96	78.176	Fukomys_damarensis
ENSXETG00000008413	larp1	56	61.014	ENSFHEG00000020307	larp1	92	66.864	Fundulus_heteroclitus
ENSXETG00000008413	larp1	99	74.882	ENSGALG00000040109	LARP1	97	76.843	Gallus_gallus
ENSXETG00000008413	larp1	100	75.327	ENSGAGG00000025113	LARP1	99	80.820	Gopherus_agassizii
ENSXETG00000008413	larp1	90	75.630	ENSGGOG00000006048	LARP1	93	75.761	Gorilla_gorilla
ENSXETG00000008413	larp1	93	71.545	ENSHBUG00000020762	larp1	98	72.069	Haplochromis_burtoni
ENSXETG00000008413	larp1	92	75.077	ENSHGLG00000006267	LARP1	89	75.615	Heterocephalus_glaber_female
ENSXETG00000008413	larp1	91	65.851	ENSHGLG00100003395	-	88	65.851	Heterocephalus_glaber_male
ENSXETG00000008413	larp1	88	77.549	ENSHGLG00100014230	-	96	77.549	Heterocephalus_glaber_male
ENSXETG00000008413	larp1	89	83.375	ENSHCOG00000010786	larp1	90	83.375	Hippocampus_comes
ENSXETG00000008413	larp1	96	67.508	ENSIPUG00000019105	Larp1	94	69.894	Ictalurus_punctatus
ENSXETG00000008413	larp1	91	73.459	ENSSTOG00000005678	LARP1	99	73.459	Ictidomys_tridecemlineatus
ENSXETG00000008413	larp1	91	72.936	ENSJJAG00000016950	Larp1	90	72.699	Jaculus_jaculus
ENSXETG00000008413	larp1	99	67.253	ENSKMAG00000018468	larp1	99	70.649	Kryptolebias_marmoratus
ENSXETG00000008413	larp1	95	68.649	ENSLBEG00000027172	larp1	93	67.956	Labrus_bergylta
ENSXETG00000008413	larp1	93	75.079	ENSLOCG00000012457	larp1	96	76.330	Lepisosteus_oculatus
ENSXETG00000008413	larp1	94	74.148	ENSLAFG00000008991	LARP1	92	73.684	Loxodonta_africana
ENSXETG00000008413	larp1	90	75.630	ENSMFAG00000031651	LARP1	93	75.761	Macaca_fascicularis
ENSXETG00000008413	larp1	90	73.053	ENSMMUG00000009411	LARP1	99	73.186	Macaca_mulatta
ENSXETG00000008413	larp1	86	75.991	ENSMNEG00000039294	LARP1	99	76.313	Macaca_nemestrina
ENSXETG00000008413	larp1	90	75.945	ENSMLEG00000035142	LARP1	93	76.076	Mandrillus_leucophaeus
ENSXETG00000008413	larp1	94	71.146	ENSMAMG00000021788	larp1	90	71.146	Mastacembelus_armatus
ENSXETG00000008413	larp1	93	71.125	ENSMZEG00005009345	larp1	98	70.885	Maylandia_zebra
ENSXETG00000008413	larp1	91	79.321	ENSMGAG00000005696	LARP1	99	77.837	Meleagris_gallopavo
ENSXETG00000008413	larp1	95	74.950	ENSMAUG00000001385	Larp1	94	74.235	Mesocricetus_auratus
ENSXETG00000008413	larp1	91	75.521	ENSMICG00000000837	LARP1	99	77.248	Microcebus_murinus
ENSXETG00000008413	larp1	99	71.230	ENSMOCG00000008920	Larp1	93	74.504	Microtus_ochrogaster
ENSXETG00000008413	larp1	90	54.261	ENSMMOG00000013364	larp1	87	57.097	Mola_mola
ENSXETG00000008413	larp1	92	77.211	ENSMODG00000008663	LARP1	99	77.211	Monodelphis_domestica
ENSXETG00000008413	larp1	99	67.652	ENSMALG00000017180	larp1	96	69.401	Monopterus_albus
ENSXETG00000008413	larp1	95	74.749	MGP_CAROLIEiJ_G0016383	Larp1	94	74.038	Mus_caroli
ENSXETG00000008413	larp1	95	74.850	ENSMUSG00000037331	Larp1	94	74.136	Mus_musculus
ENSXETG00000008413	larp1	96	74.016	MGP_PahariEiJ_G0017518	Larp1	94	74.016	Mus_pahari
ENSXETG00000008413	larp1	96	74.136	MGP_SPRETEiJ_G0017225	Larp1	94	74.136	Mus_spretus
ENSXETG00000008413	larp1	75	74.874	ENSMPUG00000013564	LARP1	88	74.318	Mustela_putorius_furo
ENSXETG00000008413	larp1	88	73.974	ENSMLUG00000002608	LARP1	97	74.190	Myotis_lucifugus
ENSXETG00000008413	larp1	91	73.004	ENSNGAG00000001098	Larp1	99	73.319	Nannospalax_galili
ENSXETG00000008413	larp1	93	70.921	ENSNBRG00000008963	larp1	95	71.354	Neolamprologus_brichardi
ENSXETG00000008413	larp1	91	74.526	ENSNLEG00000016588	LARP1	99	73.171	Nomascus_leucogenys
ENSXETG00000008413	larp1	91	71.928	ENSMEUG00000002957	LARP1	99	70.233	Notamacropus_eugenii
ENSXETG00000008413	larp1	88	77.609	ENSOPRG00000013014	LARP1	96	77.609	Ochotona_princeps
ENSXETG00000008413	larp1	88	77.874	ENSODEG00000010824	LARP1	96	77.874	Octodon_degus
ENSXETG00000008413	larp1	93	71.530	ENSONIG00000017308	larp1	92	70.734	Oreochromis_niloticus
ENSXETG00000008413	larp1	91	78.438	ENSOANG00000005096	LARP1	98	78.958	Ornithorhynchus_anatinus
ENSXETG00000008413	larp1	94	75.527	ENSOCUG00000013066	LARP1	92	75.074	Oryctolagus_cuniculus
ENSXETG00000008413	larp1	97	68.880	ENSORLG00000000824	larp1	99	72.934	Oryzias_latipes
ENSXETG00000008413	larp1	97	68.880	ENSORLG00020022241	larp1	94	68.942	Oryzias_latipes_hni
ENSXETG00000008413	larp1	97	66.964	ENSORLG00015007538	larp1	94	67.030	Oryzias_latipes_hsok
ENSXETG00000008413	larp1	97	67.031	ENSOMEG00000003134	larp1	94	67.195	Oryzias_melastigma
ENSXETG00000008413	larp1	91	76.017	ENSOGAG00000016750	LARP1	99	76.146	Otolemur_garnettii
ENSXETG00000008413	larp1	92	74.244	ENSOARG00000009893	LARP1	99	73.827	Ovis_aries
ENSXETG00000008413	larp1	90	75.630	ENSPPAG00000042993	LARP1	93	75.761	Pan_paniscus
ENSXETG00000008413	larp1	91	74.818	ENSPPRG00000009780	LARP1	94	74.557	Panthera_pardus
ENSXETG00000008413	larp1	91	74.948	ENSPTIG00000007013	LARP1	94	74.530	Panthera_tigris_altaica
ENSXETG00000008413	larp1	94	72.239	ENSPTRG00000017447	LARP1	93	75.656	Pan_troglodytes
ENSXETG00000008413	larp1	94	72.543	ENSPANG00000008080	LARP1	93	75.971	Papio_anubis
ENSXETG00000008413	larp1	92	74.118	ENSPKIG00000010096	larp1	92	72.336	Paramormyrops_kingsleyae
ENSXETG00000008413	larp1	94	66.632	ENSPKIG00000017153	-	92	67.169	Paramormyrops_kingsleyae
ENSXETG00000008413	larp1	95	67.659	ENSPMGG00000011599	larp1	94	70.563	Periophthalmus_magnuspinnatus
ENSXETG00000008413	larp1	91	73.166	ENSPEMG00000022523	Larp1	99	73.166	Peromyscus_maniculatus_bairdii
ENSXETG00000008413	larp1	92	79.097	ENSPCIG00000019242	LARP1	82	78.328	Phascolarctos_cinereus
ENSXETG00000008413	larp1	99	65.517	ENSPFOG00000005836	larp1	96	67.105	Poecilia_formosa
ENSXETG00000008413	larp1	99	66.111	ENSPLAG00000008936	larp1	96	67.658	Poecilia_latipinna
ENSXETG00000008413	larp1	99	65.789	ENSPMEG00000013656	larp1	92	69.223	Poecilia_mexicana
ENSXETG00000008413	larp1	88	71.627	ENSPREG00000005726	larp1	95	71.842	Poecilia_reticulata
ENSXETG00000008413	larp1	88	75.708	ENSPCAG00000006407	LARP1	96	75.708	Procavia_capensis
ENSXETG00000008413	larp1	91	68.438	ENSPCOG00000016949	LARP1	99	71.562	Propithecus_coquereli
ENSXETG00000008413	larp1	91	76.955	ENSPVAG00000002262	LARP1	87	76.471	Pteropus_vampyrus
ENSXETG00000008413	larp1	93	71.298	ENSPNYG00000007938	larp1	98	70.988	Pundamilia_nyererei
ENSXETG00000008413	larp1	99	70.481	ENSPNAG00000021427	larp1	92	73.618	Pygocentrus_nattereri
ENSXETG00000008413	larp1	91	73.137	ENSRNOG00000031544	Larp1	99	73.137	Rattus_norvegicus
ENSXETG00000008413	larp1	91	75.417	ENSRBIG00000038005	LARP1	93	75.971	Rhinopithecus_bieti
ENSXETG00000008413	larp1	90	75.840	ENSRROG00000034073	LARP1	99	76.425	Rhinopithecus_roxellana
ENSXETG00000008413	larp1	93	74.294	ENSSBOG00000019816	LARP1	99	74.283	Saimiri_boliviensis_boliviensis
ENSXETG00000008413	larp1	91	78.964	ENSSHAG00000011115	LARP1	99	78.964	Sarcophilus_harrisii
ENSXETG00000008413	larp1	94	72.292	ENSSFOG00015018058	-	90	72.292	Scleropages_formosus
ENSXETG00000008413	larp1	92	70.945	ENSSFOG00015020304	larp1	93	71.086	Scleropages_formosus
ENSXETG00000008413	larp1	91	69.612	ENSSMAG00000007468	larp1	88	71.064	Scophthalmus_maximus
ENSXETG00000008413	larp1	97	67.315	ENSSDUG00000000268	larp1	97	71.592	Seriola_dumerili
ENSXETG00000008413	larp1	83	72.813	ENSSLDG00000016505	larp1	97	71.478	Seriola_lalandi_dorsalis
ENSXETG00000008413	larp1	56	85.542	ENSSARG00000013907	-	83	85.542	Sorex_araneus
ENSXETG00000008413	larp1	94	79.938	ENSSPUG00000012179	-	91	78.119	Sphenodon_punctatus
ENSXETG00000008413	larp1	96	70.305	ENSSPAG00000003910	larp1	93	70.265	Stegastes_partitus
ENSXETG00000008413	larp1	94	75.326	ENSSSCG00000017069	LARP1	99	76.275	Sus_scrofa
ENSXETG00000008413	larp1	88	80.677	ENSTGUG00000000704	LARP1	100	80.677	Taeniopygia_guttata
ENSXETG00000008413	larp1	95	70.142	ENSTRUG00000009470	larp1	91	70.547	Takifugu_rubripes
ENSXETG00000008413	larp1	85	76.325	ENSTBEG00000003381	LARP1	99	76.325	Tupaia_belangeri
ENSXETG00000008413	larp1	90	76.663	ENSTTRG00000015934	LARP1	99	76.146	Tursiops_truncatus
ENSXETG00000008413	larp1	94	75.025	ENSUAMG00000019334	LARP1	90	74.578	Ursus_americanus
ENSXETG00000008413	larp1	90	74.000	ENSUMAG00000002934	LARP1	96	77.572	Ursus_maritimus
ENSXETG00000008413	larp1	86	76.386	ENSVVUG00000004644	LARP1	99	76.386	Vulpes_vulpes
ENSXETG00000008413	larp1	89	72.102	ENSXCOG00000004022	larp1	94	74.431	Xiphophorus_couchianus
ENSXETG00000008413	larp1	99	65.517	ENSXMAG00000018780	larp1	96	67.011	Xiphophorus_maculatus