EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000008422 (Gene tree)
Gene ID: -
Gene Symbol: sf3b2
Alias: -
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 19702 bases
Position: chrGL172782.1:481843-501544
Accession: XB-GENE-5875780
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000018449	DUF382	PF04037.13	1.5e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000018449	-	2340	-	ENSXETP00000018449	779 (aa)	-	F7DCJ4
ENSXETT00000061366	-	1017	-	ENSXETP00000063980	339 (aa)	-	F7EQG1

Gene Model

Click here to download ENSXETG00000008422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000008422's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000008422	sf3b2	87	78.540	ENSG00000087365	SF3B2	99	91.111	Homo_sapiens
ENSXETG00000008422	sf3b2	91	68.595	ENSAPOG00000001974	sf3b2	86	66.146	Acanthochromis_polyacanthus
ENSXETG00000008422	sf3b2	87	77.988	ENSAMEG00000017206	SF3B2	87	70.113	Ailuropoda_melanoleuca
ENSXETG00000008422	sf3b2	87	71.955	ENSACIG00000000624	sf3b2	87	66.581	Amphilophus_citrinellus
ENSXETG00000008422	sf3b2	94	69.664	ENSAOCG00000009207	sf3b2	90	66.750	Amphiprion_ocellaris
ENSXETG00000008422	sf3b2	94	69.292	ENSAPEG00000002762	sf3b2	91	66.083	Amphiprion_percula
ENSXETG00000008422	sf3b2	98	58.682	ENSACAG00000008615	SF3B2	87	58.048	Anolis_carolinensis
ENSXETG00000008422	sf3b2	87	78.540	ENSANAG00000029120	SF3B2	87	71.907	Aotus_nancymaae
ENSXETG00000008422	sf3b2	94	68.200	ENSACLG00000014771	sf3b2	91	66.285	Astatotilapia_calliptera
ENSXETG00000008422	sf3b2	84	74.629	ENSAMXG00000007929	sf3b2	86	75.358	Astyanax_mexicanus
ENSXETG00000008422	sf3b2	87	78.102	ENSBTAG00000002778	SF3B2	87	69.444	Bos_taurus
ENSXETG00000008422	sf3b2	67	50.727	WBGene00021004	sftb-2	89	50.909	Caenorhabditis_elegans
ENSXETG00000008422	sf3b2	87	78.540	ENSCJAG00000001656	SF3B2	87	71.907	Callithrix_jacchus
ENSXETG00000008422	sf3b2	87	77.956	ENSCAFG00000013033	SF3B2	87	70.076	Canis_familiaris
ENSXETG00000008422	sf3b2	87	77.956	ENSCAFG00020015382	SF3B2	87	70.076	Canis_lupus_dingo
ENSXETG00000008422	sf3b2	87	78.102	ENSCHIG00000011211	SF3B2	87	69.823	Capra_hircus
ENSXETG00000008422	sf3b2	87	77.810	ENSTSYG00000000959	SF3B2	87	71.521	Carlito_syrichta
ENSXETG00000008422	sf3b2	76	77.371	ENSCPOG00000008294	SF3B2	86	69.798	Cavia_porcellus
ENSXETG00000008422	sf3b2	87	78.540	ENSCCAG00000035256	SF3B2	87	71.907	Cebus_capucinus
ENSXETG00000008422	sf3b2	87	78.540	ENSCATG00000042240	SF3B2	90	70.581	Cercocebus_atys
ENSXETG00000008422	sf3b2	87	78.102	ENSCLAG00000016852	SF3B2	87	71.263	Chinchilla_lanigera
ENSXETG00000008422	sf3b2	87	78.540	ENSCSAG00000008121	SF3B2	87	70.581	Chlorocebus_sabaeus
ENSXETG00000008422	sf3b2	71	88.660	ENSCHOG00000001476	SF3B2	80	82.990	Choloepus_hoffmanni
ENSXETG00000008422	sf3b2	81	81.073	ENSCPBG00000022465	SF3B2	88	80.848	Chrysemys_picta_bellii
ENSXETG00000008422	sf3b2	67	68.620	ENSCING00000005665	-	99	59.660	Ciona_intestinalis
ENSXETG00000008422	sf3b2	80	60.447	ENSCSAVG00000002029	-	99	60.095	Ciona_savignyi
ENSXETG00000008422	sf3b2	87	78.540	ENSCANG00000039680	SF3B2	87	71.907	Colobus_angolensis_palliatus
ENSXETG00000008422	sf3b2	87	78.426	ENSCGRG00001015741	Sf3b2	87	71.521	Cricetulus_griseus_chok1gshd
ENSXETG00000008422	sf3b2	87	78.426	ENSCGRG00000018110	Sf3b2	90	71.521	Cricetulus_griseus_crigri
ENSXETG00000008422	sf3b2	82	74.689	ENSCSEG00000000230	sf3b2	81	75.155	Cynoglossus_semilaevis
ENSXETG00000008422	sf3b2	86	73.049	ENSCVAG00000003357	sf3b2	84	68.059	Cyprinodon_variegatus
ENSXETG00000008422	sf3b2	84	73.433	ENSDARG00000018049	sf3b2	87	68.904	Danio_rerio
ENSXETG00000008422	sf3b2	87	78.540	ENSDNOG00000009484	SF3B2	96	71.029	Dasypus_novemcinctus
ENSXETG00000008422	sf3b2	87	77.988	ENSDORG00000002495	Sf3b2	87	71.392	Dipodomys_ordii
ENSXETG00000008422	sf3b2	70	82.870	ENSETEG00000020284	SF3B2	72	82.944	Echinops_telfairi
ENSXETG00000008422	sf3b2	87	62.345	ENSEBUG00000013703	sf3b2	88	58.570	Eptatretus_burgeri
ENSXETG00000008422	sf3b2	87	78.540	ENSEASG00005004508	SF3B2	87	70.492	Equus_asinus_asinus
ENSXETG00000008422	sf3b2	87	78.540	ENSECAG00000024461	SF3B2	87	70.492	Equus_caballus
ENSXETG00000008422	sf3b2	57	86.441	ENSEEUG00000014278	-	50	86.441	Erinaceus_europaeus
ENSXETG00000008422	sf3b2	99	64.479	ENSELUG00000005586	sf3b2	88	65.167	Esox_lucius
ENSXETG00000008422	sf3b2	87	78.102	ENSFCAG00000013289	SF3B2	87	71.521	Felis_catus
ENSXETG00000008422	sf3b2	83	68.944	ENSFALG00000014653	SF3B2	92	69.290	Ficedula_albicollis
ENSXETG00000008422	sf3b2	81	79.394	ENSFDAG00000019806	SF3B2	87	71.337	Fukomys_damarensis
ENSXETG00000008422	sf3b2	94	66.579	ENSFHEG00000020968	sf3b2	85	67.417	Fundulus_heteroclitus
ENSXETG00000008422	sf3b2	83	74.465	ENSGMOG00000012131	sf3b2	99	74.962	Gadus_morhua
ENSXETG00000008422	sf3b2	67	84.630	ENSGAFG00000001675	sf3b2	90	64.625	Gambusia_affinis
ENSXETG00000008422	sf3b2	82	74.961	ENSGACG00000019012	sf3b2	98	73.853	Gasterosteus_aculeatus
ENSXETG00000008422	sf3b2	81	81.359	ENSGAGG00000023916	SF3B2	89	70.194	Gopherus_agassizii
ENSXETG00000008422	sf3b2	77	91.501	ENSGGOG00000028448	SF3B2	86	91.501	Gorilla_gorilla
ENSXETG00000008422	sf3b2	94	68.598	ENSHBUG00000017349	sf3b2	91	65.700	Haplochromis_burtoni
ENSXETG00000008422	sf3b2	87	78.102	ENSHGLG00000010807	SF3B2	87	71.521	Heterocephalus_glaber_female
ENSXETG00000008422	sf3b2	87	78.102	ENSHGLG00100006361	SF3B2	87	71.521	Heterocephalus_glaber_male
ENSXETG00000008422	sf3b2	99	65.223	ENSHCOG00000016203	sf3b2	86	66.934	Hippocampus_comes
ENSXETG00000008422	sf3b2	83	74.507	ENSIPUG00000009383	sf3b2	81	70.804	Ictalurus_punctatus
ENSXETG00000008422	sf3b2	87	78.394	ENSSTOG00000028892	SF3B2	87	71.649	Ictidomys_tridecemlineatus
ENSXETG00000008422	sf3b2	81	81.056	ENSJJAG00000018193	Sf3b2	87	71.337	Jaculus_jaculus
ENSXETG00000008422	sf3b2	67	84.310	ENSKMAG00000020181	sf3b2	83	68.219	Kryptolebias_marmoratus
ENSXETG00000008422	sf3b2	86	72.478	ENSLBEG00000027739	sf3b2	75	84.470	Labrus_bergylta
ENSXETG00000008422	sf3b2	81	77.237	ENSLACG00000010429	SF3B2	73	78.221	Latimeria_chalumnae
ENSXETG00000008422	sf3b2	87	78.394	ENSLAFG00000002128	SF3B2	87	70.521	Loxodonta_africana
ENSXETG00000008422	sf3b2	87	78.426	ENSMFAG00000003064	SF3B2	90	70.492	Macaca_fascicularis
ENSXETG00000008422	sf3b2	87	73.723	ENSMMUG00000011743	SF3B2	87	67.655	Macaca_mulatta
ENSXETG00000008422	sf3b2	87	78.540	ENSMNEG00000034437	SF3B2	90	70.581	Macaca_nemestrina
ENSXETG00000008422	sf3b2	87	78.540	ENSMLEG00000029373	SF3B2	90	70.581	Mandrillus_leucophaeus
ENSXETG00000008422	sf3b2	94	68.568	ENSMAMG00000014103	sf3b2	90	66.833	Mastacembelus_armatus
ENSXETG00000008422	sf3b2	94	68.200	ENSMZEG00005020789	sf3b2	90	66.285	Maylandia_zebra
ENSXETG00000008422	sf3b2	87	76.505	ENSMICG00000016942	-	85	71.332	Microcebus_murinus
ENSXETG00000008422	sf3b2	87	78.686	ENSMICG00000008565	-	87	72.036	Microcebus_murinus
ENSXETG00000008422	sf3b2	87	78.248	ENSMOCG00000003136	Sf3b2	87	71.521	Microtus_ochrogaster
ENSXETG00000008422	sf3b2	94	68.464	ENSMMOG00000012928	sf3b2	85	68.127	Mola_mola
ENSXETG00000008422	sf3b2	81	76.378	ENSMODG00000025020	-	100	76.025	Monodelphis_domestica
ENSXETG00000008422	sf3b2	81	81.279	ENSMODG00000008490	-	95	71.046	Monodelphis_domestica
ENSXETG00000008422	sf3b2	84	72.214	ENSMALG00000015137	sf3b2	79	73.105	Monopterus_albus
ENSXETG00000008422	sf3b2	87	78.102	MGP_CAROLIEiJ_G0022539	Sf3b2	87	71.778	Mus_caroli
ENSXETG00000008422	sf3b2	87	78.248	ENSMUSG00000024853	Sf3b2	87	71.778	Mus_musculus
ENSXETG00000008422	sf3b2	87	78.394	MGP_PahariEiJ_G0014036	Sf3b2	87	71.521	Mus_pahari
ENSXETG00000008422	sf3b2	87	78.248	MGP_SPRETEiJ_G0023453	Sf3b2	87	71.778	Mus_spretus
ENSXETG00000008422	sf3b2	87	77.956	ENSMPUG00000011349	SF3B2	87	70.076	Mustela_putorius_furo
ENSXETG00000008422	sf3b2	87	78.394	ENSMLUG00000011136	SF3B2	87	70.328	Myotis_lucifugus
ENSXETG00000008422	sf3b2	87	78.102	ENSNGAG00000012103	Sf3b2	87	71.392	Nannospalax_galili
ENSXETG00000008422	sf3b2	87	75.072	ENSNLEG00000006007	SF3B2	87	69.299	Nomascus_leucogenys
ENSXETG00000008422	sf3b2	71	86.080	ENSMEUG00000000019	SF3B2	67	86.080	Notamacropus_eugenii
ENSXETG00000008422	sf3b2	87	74.015	ENSODEG00000017764	SF3B2	87	67.526	Octodon_degus
ENSXETG00000008422	sf3b2	94	67.374	ENSONIG00000013068	sf3b2	91	64.214	Oreochromis_niloticus
ENSXETG00000008422	sf3b2	81	74.615	ENSOANG00000012482	SF3B2	100	65.090	Ornithorhynchus_anatinus
ENSXETG00000008422	sf3b2	64	47.389	ENSOCUG00000024154	-	88	50.417	Oryctolagus_cuniculus
ENSXETG00000008422	sf3b2	99	69.724	ENSOCUG00000015722	-	92	69.697	Oryctolagus_cuniculus
ENSXETG00000008422	sf3b2	88	71.348	ENSORLG00000008235	sf3b2	80	71.326	Oryzias_latipes
ENSXETG00000008422	sf3b2	88	71.348	ENSORLG00020005357	sf3b2	87	67.886	Oryzias_latipes_hni
ENSXETG00000008422	sf3b2	88	71.348	ENSORLG00015022454	sf3b2	82	74.363	Oryzias_latipes_hsok
ENSXETG00000008422	sf3b2	88	71.124	ENSOMEG00000017480	sf3b2	83	71.408	Oryzias_melastigma
ENSXETG00000008422	sf3b2	71	86.201	ENSOGAG00000005799	SF3B2	87	67.681	Otolemur_garnettii
ENSXETG00000008422	sf3b2	87	78.102	ENSOARG00000002125	SF3B2	92	77.080	Ovis_aries
ENSXETG00000008422	sf3b2	87	78.540	ENSPPAG00000007359	SF3B2	88	70.581	Pan_paniscus
ENSXETG00000008422	sf3b2	87	78.102	ENSPPRG00000013334	SF3B2	87	71.521	Panthera_pardus
ENSXETG00000008422	sf3b2	87	78.102	ENSPTIG00000015022	SF3B2	87	71.521	Panthera_tigris_altaica
ENSXETG00000008422	sf3b2	87	78.540	ENSPTRG00000003912	SF3B2	88	70.581	Pan_troglodytes
ENSXETG00000008422	sf3b2	87	78.540	ENSPANG00000008593	SF3B2	90	70.581	Papio_anubis
ENSXETG00000008422	sf3b2	84	75.415	ENSPKIG00000016576	sf3b2	87	75.671	Paramormyrops_kingsleyae
ENSXETG00000008422	sf3b2	81	81.359	ENSPSIG00000003158	SF3B2	96	72.616	Pelodiscus_sinensis
ENSXETG00000008422	sf3b2	85	70.226	ENSPMGG00000000819	sf3b2	87	64.096	Periophthalmus_magnuspinnatus
ENSXETG00000008422	sf3b2	98	65.722	ENSPEMG00000015451	-	94	65.380	Peromyscus_maniculatus_bairdii
ENSXETG00000008422	sf3b2	87	78.394	ENSPEMG00000015437	Sf3b2	87	71.521	Peromyscus_maniculatus_bairdii
ENSXETG00000008422	sf3b2	81	81.123	ENSPCIG00000008381	SF3B2	91	70.791	Phascolarctos_cinereus
ENSXETG00000008422	sf3b2	87	71.674	ENSPFOG00000002552	sf3b2	86	66.886	Poecilia_formosa
ENSXETG00000008422	sf3b2	87	71.388	ENSPLAG00000001471	sf3b2	85	67.333	Poecilia_latipinna
ENSXETG00000008422	sf3b2	87	71.347	ENSPMEG00000013180	sf3b2	85	66.974	Poecilia_mexicana
ENSXETG00000008422	sf3b2	94	67.287	ENSPREG00000002665	sf3b2	85	68.043	Poecilia_reticulata
ENSXETG00000008422	sf3b2	56	73.497	ENSPPYG00000003034	-	81	63.129	Pongo_abelii
ENSXETG00000008422	sf3b2	87	78.102	ENSPCAG00000005129	SF3B2	87	69.365	Procavia_capensis
ENSXETG00000008422	sf3b2	87	78.540	ENSPCOG00000025375	SF3B2	87	71.907	Propithecus_coquereli
ENSXETG00000008422	sf3b2	52	95.175	ENSPVAG00000005466	-	84	95.175	Pteropus_vampyrus
ENSXETG00000008422	sf3b2	88	71.245	ENSPNYG00000023594	sf3b2	92	70.201	Pundamilia_nyererei
ENSXETG00000008422	sf3b2	86	73.021	ENSPNAG00000001891	sf3b2	89	65.299	Pygocentrus_nattereri
ENSXETG00000008422	sf3b2	87	78.102	ENSRNOG00000020412	Sf3b2	87	71.392	Rattus_norvegicus
ENSXETG00000008422	sf3b2	87	78.540	ENSRBIG00000034065	SF3B2	87	71.907	Rhinopithecus_bieti
ENSXETG00000008422	sf3b2	87	78.540	ENSRROG00000034496	SF3B2	87	71.907	Rhinopithecus_roxellana
ENSXETG00000008422	sf3b2	98	69.625	ENSSBOG00000026337	SF3B2	89	69.875	Saimiri_boliviensis_boliviensis
ENSXETG00000008422	sf3b2	81	66.769	ENSSHAG00000018043	-	91	59.415	Sarcophilus_harrisii
ENSXETG00000008422	sf3b2	81	77.621	ENSSHAG00000010933	-	87	67.342	Sarcophilus_harrisii
ENSXETG00000008422	sf3b2	86	73.907	ENSSFOG00015021125	sf3b2	84	69.110	Scleropages_formosus
ENSXETG00000008422	sf3b2	94	68.000	ENSSMAG00000004079	sf3b2	92	65.997	Scophthalmus_maximus
ENSXETG00000008422	sf3b2	67	85.878	ENSSLDG00000006838	sf3b2	90	65.802	Seriola_lalandi_dorsalis
ENSXETG00000008422	sf3b2	50	96.032	ENSSARG00000003707	-	55	96.032	Sorex_araneus
ENSXETG00000008422	sf3b2	80	81.300	ENSSPUG00000009198	SF3B2	88	70.656	Sphenodon_punctatus
ENSXETG00000008422	sf3b2	94	66.928	ENSSPAG00000004406	sf3b2	90	65.191	Stegastes_partitus
ENSXETG00000008422	sf3b2	87	77.810	ENSSSCG00000012957	SF3B2	87	70.342	Sus_scrofa
ENSXETG00000008422	sf3b2	99	55.293	ENSTRUG00000007611	sf3b2	89	69.558	Takifugu_rubripes
ENSXETG00000008422	sf3b2	98	66.150	ENSTNIG00000007441	sf3b2	92	63.659	Tetraodon_nigroviridis
ENSXETG00000008422	sf3b2	81	73.250	ENSTBEG00000004258	SF3B2	69	88.571	Tupaia_belangeri
ENSXETG00000008422	sf3b2	87	77.956	ENSTTRG00000014339	SF3B2	87	69.949	Tursiops_truncatus
ENSXETG00000008422	sf3b2	84	77.246	ENSUAMG00000020754	SF3B2	85	67.972	Ursus_americanus
ENSXETG00000008422	sf3b2	87	78.102	ENSUMAG00000010994	SF3B2	87	70.202	Ursus_maritimus
ENSXETG00000008422	sf3b2	52	85.593	ENSVPAG00000008695	SF3B2	66	85.593	Vicugna_pacos
ENSXETG00000008422	sf3b2	87	77.810	ENSVVUG00000027029	SF3B2	87	69.949	Vulpes_vulpes
ENSXETG00000008422	sf3b2	80	75.478	ENSXCOG00000008943	sf3b2	84	74.960	Xiphophorus_couchianus
ENSXETG00000008422	sf3b2	67	84.250	ENSXMAG00000008467	sf3b2	85	66.975	Xiphophorus_maculatus