EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000008755 (Gene tree)
Gene ID: -
Gene Symbol: safb
Alias: -
Full Name: Xenopus tropicalis scaffold attachment factor B (safb)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 22122 bases
Position: chrGL172748.1:199511-221632
Accession: NM_001016713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000059505	RRM_1	PF00076.22	7.6e-15	1	1
ENSXETP00000019218	SAP	PF02037.27	1.2e-10	1	1
ENSXETP00000059505	SAP	PF02037.27	9.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000019218	-	1369	-	ENSXETP00000019218	135 (aa)	-	F7AKR8
ENSXETT00000064471	-	2554	-	ENSXETP00000059505	845 (aa)	-	F6QFV6

Gene Model

Click here to download ENSXETG00000008755's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000008755's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000008755	safb	91	62.385	ENSG00000160633	SAFB	81	62.069	Homo_sapiens
ENSXETG00000008755	safb	73	64.356	ENSAMEG00000012254	SAFB	66	50.577	Ailuropoda_melanoleuca
ENSXETG00000008755	safb	79	71.014	ENSACIG00000006247	safb	51	71.014	Amphilophus_citrinellus
ENSXETG00000008755	safb	92	46.871	ENSAOCG00000006308	safb	67	43.049	Amphiprion_ocellaris
ENSXETG00000008755	safb	93	50.909	ENSAPLG00000005780	-	64	47.653	Anas_platyrhynchos
ENSXETG00000008755	safb	93	55.865	ENSAPLG00000006355	-	65	50.460	Anas_platyrhynchos
ENSXETG00000008755	safb	97	54.363	ENSANAG00000028821	SAFB	63	63.551	Aotus_nancymaae
ENSXETG00000008755	safb	83	54.783	ENSAMXG00000018154	safb	87	45.050	Astyanax_mexicanus
ENSXETG00000008755	safb	78	58.879	ENSBTAG00000051794	-	61	55.556	Bos_taurus
ENSXETG00000008755	safb	97	53.529	ENSBTAG00000007875	SAFB	67	50.412	Bos_taurus
ENSXETG00000008755	safb	92	54.383	ENSCJAG00000017081	SAFB	59	52.575	Callithrix_jacchus
ENSXETG00000008755	safb	64	69.318	ENSCAFG00000018803	SAFB	57	50.741	Canis_familiaris
ENSXETG00000008755	safb	97	52.934	ENSCAFG00020018943	SAFB	66	50.741	Canis_lupus_dingo
ENSXETG00000008755	safb	97	53.828	ENSCHIG00000007262	SAFB	94	43.627	Capra_hircus
ENSXETG00000008755	safb	80	52.258	ENSCAPG00000012121	SAFB	93	52.258	Cavia_aperea
ENSXETG00000008755	safb	64	64.368	ENSCPOG00000026322	SAFB	67	48.811	Cavia_porcellus
ENSXETG00000008755	safb	89	70.930	ENSCCAG00000020193	SAFB	63	63.551	Cebus_capucinus
ENSXETG00000008755	safb	91	63.303	ENSCATG00000029994	SAFB	63	58.462	Cercocebus_atys
ENSXETG00000008755	safb	97	52.023	ENSCLAG00000007734	SAFB	66	49.359	Chinchilla_lanigera
ENSXETG00000008755	safb	97	54.481	ENSCSAG00000009949	SAFB	66	50.990	Chlorocebus_sabaeus
ENSXETG00000008755	safb	63	41.831	ENSCHOG00000003208	SAFB	64	42.342	Choloepus_hoffmanni
ENSXETG00000008755	safb	91	52.123	ENSCPBG00000010936	-	64	48.501	Chrysemys_picta_bellii
ENSXETG00000008755	safb	90	52.625	ENSCPBG00000010928	-	63	47.970	Chrysemys_picta_bellii
ENSXETG00000008755	safb	82	61.818	ENSCANG00000004774	-	93	57.692	Colobus_angolensis_palliatus
ENSXETG00000008755	safb	97	50.883	ENSCANG00000019754	-	66	48.764	Colobus_angolensis_palliatus
ENSXETG00000008755	safb	67	67.391	ENSCGRG00001002254	Safb	67	47.377	Cricetulus_griseus_chok1gshd
ENSXETG00000008755	safb	59	44.583	ENSCGRG00000011529	Safb	61	43.929	Cricetulus_griseus_crigri
ENSXETG00000008755	safb	86	66.667	ENSCSEG00000019870	safb	60	67.647	Cynoglossus_semilaevis
ENSXETG00000008755	safb	95	43.426	ENSCVAG00000002226	safb	63	41.075	Cyprinodon_variegatus
ENSXETG00000008755	safb	93	52.344	ENSDARG00000020467	safb	87	44.224	Danio_rerio
ENSXETG00000008755	safb	97	54.642	ENSDNOG00000015746	SAFB	79	50.543	Dasypus_novemcinctus
ENSXETG00000008755	safb	64	68.182	ENSDORG00000016200	Safb	91	48.878	Dipodomys_ordii
ENSXETG00000008755	safb	61	70.283	ENSETEG00000018679	SAFB	65	66.986	Echinops_telfairi
ENSXETG00000008755	safb	64	69.318	ENSEASG00005023019	SAFB	66	49.918	Equus_asinus_asinus
ENSXETG00000008755	safb	64	69.318	ENSECAG00000018659	SAFB	63	50.247	Equus_caballus
ENSXETG00000008755	safb	97	44.507	ENSELUG00000022327	safb	73	47.656	Esox_lucius
ENSXETG00000008755	safb	97	53.756	ENSFCAG00000011835	SAFB	66	50.412	Felis_catus
ENSXETG00000008755	safb	90	53.524	ENSFALG00000013881	-	64	48.654	Ficedula_albicollis
ENSXETG00000008755	safb	99	52.602	ENSFALG00000013882	-	61	49.918	Ficedula_albicollis
ENSXETG00000008755	safb	95	49.080	ENSFDAG00000020306	SAFB	95	50.318	Fukomys_damarensis
ENSXETG00000008755	safb	87	54.167	ENSFHEG00000004219	safb	65	41.047	Fundulus_heteroclitus
ENSXETG00000008755	safb	99	53.061	ENSGALG00000013365	-	66	50.903	Gallus_gallus
ENSXETG00000008755	safb	99	53.788	ENSGALG00000001948	-	67	50.234	Gallus_gallus
ENSXETG00000008755	safb	99	54.644	ENSGAGG00000008424	-	70	50.698	Gopherus_agassizii
ENSXETG00000008755	safb	71	54.911	ENSGAGG00000017702	-	50	52.260	Gopherus_agassizii
ENSXETG00000008755	safb	91	62.385	ENSGGOG00000015109	SAFB	81	62.069	Gorilla_gorilla
ENSXETG00000008755	safb	64	69.318	ENSHGLG00000015883	SAFB	66	49.518	Heterocephalus_glaber_female
ENSXETG00000008755	safb	85	54.839	ENSHGLG00100004228	SAFB	91	54.839	Heterocephalus_glaber_male
ENSXETG00000008755	safb	93	49.219	ENSIPUG00000024869	safb2	82	45.763	Ictalurus_punctatus
ENSXETG00000008755	safb	63	48.768	ENSSTOG00000002783	SAFB	65	49.117	Ictidomys_tridecemlineatus
ENSXETG00000008755	safb	98	50.562	ENSJJAG00000009021	Safb	66	48.882	Jaculus_jaculus
ENSXETG00000008755	safb	95	44.970	ENSKMAG00000022308	safb	64	41.206	Kryptolebias_marmoratus
ENSXETG00000008755	safb	96	45.403	ENSLBEG00000006015	safb	63	43.543	Labrus_bergylta
ENSXETG00000008755	safb	79	55.963	ENSLACG00000018090	SAFB	66	50.647	Latimeria_chalumnae
ENSXETG00000008755	safb	97	50.288	ENSLOCG00000003613	safb	73	44.904	Lepisosteus_oculatus
ENSXETG00000008755	safb	97	51.684	ENSLAFG00000003840	SAFB	66	49.836	Loxodonta_africana
ENSXETG00000008755	safb	91	63.303	ENSMFAG00000003885	SAFB	81	63.218	Macaca_fascicularis
ENSXETG00000008755	safb	91	63.303	ENSMMUG00000017970	SAFB	81	63.218	Macaca_mulatta
ENSXETG00000008755	safb	97	52.364	ENSMNEG00000035637	SAFB	81	63.218	Macaca_nemestrina
ENSXETG00000008755	safb	97	49.942	ENSMLEG00000038637	SAFB	81	63.218	Mandrillus_leucophaeus
ENSXETG00000008755	safb	95	46.588	ENSMZEG00005009120	safb	64	44.240	Maylandia_zebra
ENSXETG00000008755	safb	70	67.708	ENSMGAG00000001051	-	55	62.733	Meleagris_gallopavo
ENSXETG00000008755	safb	97	50.587	ENSMGAG00000001101	-	65	47.496	Meleagris_gallopavo
ENSXETG00000008755	safb	79	61.207	ENSMICG00000046795	-	99	59.375	Microcebus_murinus
ENSXETG00000008755	safb	99	51.546	ENSMICG00000008739	-	67	50.654	Microcebus_murinus
ENSXETG00000008755	safb	65	60.204	ENSMICG00000034927	-	81	60.204	Microcebus_murinus
ENSXETG00000008755	safb	64	67.045	ENSMOCG00000014040	Safb	66	47.619	Microtus_ochrogaster
ENSXETG00000008755	safb	65	57.303	ENSMMOG00000020366	-	57	52.778	Mola_mola
ENSXETG00000008755	safb	98	51.536	ENSMODG00000001236	SAFB	65	50.412	Monodelphis_domestica
ENSXETG00000008755	safb	95	47.232	ENSMALG00000020330	safb	68	43.434	Monopterus_albus
ENSXETG00000008755	safb	64	70.455	MGP_CAROLIEiJ_G0021780	Safb	67	47.302	Mus_caroli
ENSXETG00000008755	safb	64	70.455	ENSMUSG00000071054	Safb	67	47.302	Mus_musculus
ENSXETG00000008755	safb	64	70.455	MGP_PahariEiJ_G0020769	Safb	93	42.714	Mus_pahari
ENSXETG00000008755	safb	64	68.182	ENSMPUG00000006123	SAFB	62	50.577	Mustela_putorius_furo
ENSXETG00000008755	safb	97	54.396	ENSMLUG00000001081	SAFB	66	51.400	Myotis_lucifugus
ENSXETG00000008755	safb	97	50.229	ENSNGAG00000019882	Safb	67	46.751	Nannospalax_galili
ENSXETG00000008755	safb	50	70.000	ENSNBRG00000000496	-	65	71.014	Neolamprologus_brichardi
ENSXETG00000008755	safb	91	61.468	ENSNLEG00000013551	SAFB	66	56.923	Nomascus_leucogenys
ENSXETG00000008755	safb	63	48.639	ENSOPRG00000011561	-	67	48.545	Ochotona_princeps
ENSXETG00000008755	safb	64	68.182	ENSODEG00000014838	SAFB	66	48.636	Octodon_degus
ENSXETG00000008755	safb	95	47.485	ENSONIG00000002318	safb	64	45.378	Oreochromis_niloticus
ENSXETG00000008755	safb	89	47.059	ENSOCUG00000014628	SAFB	62	47.961	Oryctolagus_cuniculus
ENSXETG00000008755	safb	95	45.131	ENSORLG00000016989	safb	64	42.833	Oryzias_latipes
ENSXETG00000008755	safb	96	42.910	ENSORLG00020000404	safb	65	40.877	Oryzias_latipes_hni
ENSXETG00000008755	safb	97	45.064	ENSORLG00015010733	safb	64	43.174	Oryzias_latipes_hsok
ENSXETG00000008755	safb	95	44.900	ENSOMEG00000009066	safb	65	42.379	Oryzias_melastigma
ENSXETG00000008755	safb	73	61.468	ENSOGAG00000027769	SAFB	66	50.825	Otolemur_garnettii
ENSXETG00000008755	safb	82	49.028	ENSOARG00000007856	-	78	49.183	Ovis_aries
ENSXETG00000008755	safb	97	50.294	ENSOARG00000007662	-	67	50.577	Ovis_aries
ENSXETG00000008755	safb	91	62.385	ENSPPAG00000035129	SAFB	81	62.069	Pan_paniscus
ENSXETG00000008755	safb	97	52.700	ENSPPRG00000017197	SAFB	66	50.412	Panthera_pardus
ENSXETG00000008755	safb	91	62.385	ENSPTRG00000010335	SAFB	81	62.069	Pan_troglodytes
ENSXETG00000008755	safb	91	63.303	ENSPANG00000007770	SAFB	81	63.218	Papio_anubis
ENSXETG00000008755	safb	99	45.717	ENSPKIG00000009902	safb	67	44.071	Paramormyrops_kingsleyae
ENSXETG00000008755	safb	99	54.075	ENSPSIG00000011679	-	66	49.359	Pelodiscus_sinensis
ENSXETG00000008755	safb	99	51.254	ENSPSIG00000009367	-	66	49.365	Pelodiscus_sinensis
ENSXETG00000008755	safb	64	69.318	ENSPEMG00000020428	Safb	66	47.687	Peromyscus_maniculatus_bairdii
ENSXETG00000008755	safb	69	67.164	ENSPFOG00000007745	safb	60	62.500	Poecilia_formosa
ENSXETG00000008755	safb	73	61.538	ENSPLAG00000001614	safb	51	58.000	Poecilia_latipinna
ENSXETG00000008755	safb	73	60.256	ENSPMEG00000021023	safb	68	40.375	Poecilia_mexicana
ENSXETG00000008755	safb	55	64.000	ENSPREG00000012496	safb	65	40.847	Poecilia_reticulata
ENSXETG00000008755	safb	97	54.481	ENSPPYG00000009428	SAFB	66	50.990	Pongo_abelii
ENSXETG00000008755	safb	96	49.355	ENSPCAG00000006475	SAFB	66	45.902	Procavia_capensis
ENSXETG00000008755	safb	99	49.943	ENSPCOG00000014090	SAFB	64	53.023	Propithecus_coquereli
ENSXETG00000008755	safb	97	51.056	ENSPVAG00000004913	SAFB	66	49.918	Pteropus_vampyrus
ENSXETG00000008755	safb	79	54.206	ENSPNAG00000021838	safb	63	45.904	Pygocentrus_nattereri
ENSXETG00000008755	safb	64	67.045	ENSRNOG00000050543	Safb	68	47.492	Rattus_norvegicus
ENSXETG00000008755	safb	91	51.790	ENSRBIG00000042509	SAFB	81	62.069	Rhinopithecus_bieti
ENSXETG00000008755	safb	91	62.385	ENSRROG00000029278	SAFB	81	62.069	Rhinopithecus_roxellana
ENSXETG00000008755	safb	89	70.930	ENSSBOG00000026291	SAFB	63	63.551	Saimiri_boliviensis_boliviensis
ENSXETG00000008755	safb	97	47.712	ENSSFOG00015008156	safb	65	46.321	Scleropages_formosus
ENSXETG00000008755	safb	84	59.341	ENSSDUG00000009652	safb	56	58.491	Seriola_dumerili
ENSXETG00000008755	safb	65	65.591	ENSSLDG00000001670	safb	64	44.966	Seriola_lalandi_dorsalis
ENSXETG00000008755	safb	63	49.278	ENSSARG00000010475	SAFB	64	49.636	Sorex_araneus
ENSXETG00000008755	safb	58	45.882	ENSSPUG00000009747	-	66	44.981	Sphenodon_punctatus
ENSXETG00000008755	safb	97	52.784	ENSSSCG00000013522	SAFB	77	51.236	Sus_scrofa
ENSXETG00000008755	safb	97	54.886	ENSTGUG00000000489	-	71	51.618	Taeniopygia_guttata
ENSXETG00000008755	safb	98	52.199	ENSTGUG00000000502	-	67	49.408	Taeniopygia_guttata
ENSXETG00000008755	safb	92	44.917	ENSTNIG00000015470	safb	73	41.491	Tetraodon_nigroviridis
ENSXETG00000008755	safb	64	45.977	ENSTBEG00000013124	-	50	56.140	Tupaia_belangeri
ENSXETG00000008755	safb	86	74.286	ENSTTRG00000013588	SAFB	57	58.929	Tursiops_truncatus
ENSXETG00000008755	safb	75	55.090	ENSUAMG00000024543	SAFB	51	54.478	Ursus_americanus
ENSXETG00000008755	safb	84	50.000	ENSUMAG00000009734	SAFB	89	49.588	Ursus_maritimus
ENSXETG00000008755	safb	72	64.012	ENSVPAG00000012043	SAFB	60	69.737	Vicugna_pacos
ENSXETG00000008755	safb	64	69.318	ENSVVUG00000013720	SAFB	57	50.741	Vulpes_vulpes
ENSXETG00000008755	safb	75	58.974	ENSXMAG00000003458	safb	65	40.375	Xiphophorus_maculatus