EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000008836 (Gene tree)
Gene ID: -
Gene Symbol: ddx21
Alias: -
Full Name: DEAD-box helicase 21
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 10446 bases
Position: chrGL172880.1:1173906-1184351
Accession: XB-GENE-1012547
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000019415	GUCT	PF08152.12	3.7e-33	1	1
ENSXETP00000060142	GUCT	PF08152.12	4.2e-33	1	1
ENSXETP00000019415	DEAD	PF00270.29	1.2e-23	1	1
ENSXETP00000060142	DEAD	PF00270.29	3.8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000019415	-	2277	-	ENSXETP00000019415	758 (aa)	-	F6SH27
ENSXETT00000061352	-	2265	-	ENSXETP00000060142	754 (aa)	-	F7DGD5

Gene Model

Click here to download ENSXETG00000008836's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000008836's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000008836	ddx21	52	30.193	ENSXETG00000011767	ddx43	52	33.242
ENSXETG00000008836	ddx21	50	30.711	ENSXETG00000014458	ddx10	55	30.711
ENSXETG00000008836	ddx21	50	32.564	ENSXETG00000010135	ddx49	76	32.564

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000008836	ddx21	77	53.377	ENSCSAG00000007762	-	64	54.727	Chlorocebus_sabaeus
ENSXETG00000008836	ddx21	71	42.804	ENSCING00000003502	-	89	40.224	Ciona_intestinalis
ENSXETG00000008836	ddx21	66	40.119	ENSCSAVG00000004191	-	99	40.116	Ciona_savignyi